# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_0010	sequence001:303..644(+)	internal_stop_codon	642..644(+)		Q6F169	transcriptional regulator MraZ	99.1	77.4	38.9
MGA_3	LOCUS_0020	sequence001:743..1165(+)	internal_stop_codon	1163..1165(+)		Q6F170	ribosomal RNA small subunit methyltransferase H	99.3	45.5	55.0
MGA_4	LOCUS_0030	sequence001:1178..1645(+)	internal_stop_codon	1163..1165(+)		Q8Y5L7	ribosomal RNA small subunit methyltransferase H	97.4	52.2	46.0
MGA_8	LOCUS_0070	sequence001:4341..4937(+)	internal_stop_codon	4935..4937(+),5166..5168(+)		Q6F0G9	CTP synthase	100.0	37.4	59.8
MGA_10	LOCUS_0090	sequence001:5388..5939(+)	internal_stop_codon	5322..5324(+),5166..5168(+)		WP_010978180.1	CTP synthetase	96.7	33.5	46.4
MGA_13	LOCUS_0120	sequence001:6732..6893(+)	internal_stop_codon	7167..7169(+),6891..6893(+),6702..6704(+)		WP_000384691.1	isoleucine--tRNA ligase	100.0	5.8	79.2
MGA_14	LOCUS_0130	sequence001:6906..7169(+)	internal_stop_codon	7167..7169(+),6891..6893(+),7317..7319(+),6702..6704(+),7302..7304(+)		Q7VDV0	isoleucine--tRNA ligase	100.0	9.1	45.5
MGA_16	LOCUS_0150	sequence001:7644..7805(+)	internal_stop_codon	7962..7964(+),7443..7445(+),7803..7805(+),7986..7988(+),7917..7919(+),7845..7847(+)		Q6F175	isoleucine--tRNA ligase	92.5	5.8	52.8
MGA_17	LOCUS_0160	sequence001:8550..8963(+)	internal_stop_codon	8271..8273(+),8448..8450(+),8961..8963(+)		Q8Y5N8	isoleucine--tRNA ligase	81.8	12.5	39.7
MGA_20	LOCUS_0190	sequence001:10902..11573(-)	partial			WP_001284282.1	ribonuclease HIII	97.8	68.6	34.8
MGA_22	LOCUS_0210	sequence001:12363..12725(+)	internal_stop_codon	12186..12188(+),12309..12311(+)		Q81E01	1-acyl-sn-glycerol-3-phosphate acyltransferase	67.5	34.7	44.6
MGA_27	LOCUS_0260	sequence001:15375..15806(+)	internal_stop_codon	15981..15983(+),15804..15806(+),16047..16049(+),16002..16004(+)		WP_011182968.1	peptidase M17	98.6	31.3	48.2
MGA_28	LOCUS_0270	sequence001:15813..15983(+)	internal_stop_codon	15981..15983(+),15804..15806(+),16047..16049(+),16002..16004(+)		P75206	putative cytosol aminopeptidase	98.2	12.4	70.9
MGA_29	LOCUS_0280	sequence001:16053..16277(+)	internal_stop_codon	15981..15983(+),15804..15806(+),16047..16049(+),16002..16004(+)		WP_011182968.1	peptidase M17	97.3	15.9	48.6
MGA_36	LOCUS_0350	sequence001:21140..21448(+)	internal_stop_codon	21446..21448(+)		Q6F0J3	30S ribosomal protein S7	98.0	64.5	71.0
MGA_37	LOCUS_0360	sequence001:21485..21607(+)	internal_stop_codon	21446..21448(+)		Q8DVV5	30S ribosomal protein S7	100.0	25.6	82.5
MGA_38	LOCUS_0370	sequence001:21623..21778(+)	internal_stop_codon	21776..21778(+),21980..21982(+),21836..21838(+)		Q8CQ82	elongation factor G	100.0	7.4	82.4
MGA_39	LOCUS_0380	sequence001:22163..23146(+)	internal_stop_codon	21980..21982(+),22112..22114(+),23144..23146(+)		Q6F0J4	elongation factor G	100.0	47.5	69.4
MGA_40	LOCUS_0390	sequence001:23288..23695(+)	internal_stop_codon	23144..23146(+)		Q814C5	elongation factor G	97.8	18.9	65.2
MGA_41	LOCUS_0400	sequence001:23887..24672(+)	internal_stop_codon	24670..24672(+),24745..24747(+),24874..24876(+)		WP_010989585.1	transporter	99.2	45.2	37.5
MGA_46	LOCUS_0450	sequence001:29003..29356(-)	partial			WP_000831929.1	alanine aminotransferase	92.3	38.8	28.7
MGA_49	LOCUS_0480	sequence001:31366..32046(+)	internal_stop_codon	32044..32046(+)		Q8RE97	Holliday junction ATP-dependent DNA helicase RuvB	98.7	67.2	38.6
MGA_51	LOCUS_0500	sequence001:33064..33825(+)	internal_stop_codon	33823..33825(+)		WP_002485294.1	protein translocase subunit SecDF	100.0	34.3	41.4
MGA_53	LOCUS_0520	sequence001:34339..34716(+)	internal_stop_codon	34315..34317(+)		WP_000749795.1	protein translocase subunit SecDF	97.6	16.1	45.9
MGA_55	LOCUS_0540	sequence001:36485..37312(+)	internal_stop_codon	37397..37399(+),37310..37312(+),37520..37522(+),37532..37534(+),36425..36427(+),36368..36370(+)		Q5SKD2	aspartate--tRNA(Asp) ligase	100.0	48.8	51.6
MGA_56	LOCUS_0550	sequence001:37538..37999(+)	internal_stop_codon	37397..37399(+),37532..37534(+),37520..37522(+),37310..37312(+)		Q8DWV5	aspartate--tRNA ligase	98.7	25.9	56.3
MGA_62	LOCUS_0610	sequence001:40322..40621(+)	internal_stop_codon	40793..40795(+),40247..40249(+),40259..40261(+),40853..40855(+),40619..40621(+),40679..40681(+)		P36430	leucine--tRNA ligase	100.0	12.3	78.8
MGA_63	LOCUS_0620	sequence001:41348..41542(+)	internal_stop_codon	41327..41329(+),41258..41260(+),41573..41575(+),41540..41542(+),41156..41158(+),41096..41098(+)		Q1WUT3	leucine--tRNA ligase	92.2	7.3	78.0
MGA_64	LOCUS_0630	sequence001:41594..41860(+)	internal_stop_codon	41858..41860(+),41327..41329(+),41573..41575(+),41540..41542(+)		Q6MSR0	leucine--tRNA ligase	83.0	9.5	51.3
MGA_65	LOCUS_0640	sequence001:42510..42971(+)	internal_stop_codon	42261..42263(+),42339..42341(+),42411..42413(+),42969..42971(+)		Q6F152	tRNA-specific 2-thiouridylase MnmA	100.0	42.5	74.2
MGA_67	LOCUS_0660	sequence001:43679..44587(+)	internal_stop_codon	43616..43618(+),43601..43603(+),44618..44620(+),44585..44587(+)		WP_011016277.1	peptidase M20	98.3	65.9	34.4
MGA_71	LOCUS_0700	sequence001:46466..46648(+)	internal_stop_codon	46646..46648(+),46706..46708(+),46271..46273(+),46832..46834(+),46352..46354(+)		O67323	alanine--tRNA ligase	96.7	6.7	67.2
MGA_72	LOCUS_0710	sequence001:46712..46834(+)	internal_stop_codon	46832..46834(+),46646..46648(+),46706..46708(+)		Q6F0K3	alanine--tRNA ligase	100.0	4.7	64.3
MGA_73	LOCUS_0720	sequence001:46979..48802(+)	internal_stop_codon	46832..46834(+),46706..46708(+)		P61704	alanine--tRNA ligase	99.3	71.1	35.5
MGA_74	LOCUS_0730	sequence001:49065..49256(+)	internal_stop_codon	48954..48956(+)		Q6F101	putative pre-16S rRNA nuclease	98.4	43.7	51.6
MGA_80	LOCUS_0790	sequence001:50980..51369(+)	internal_stop_codon	50896..50898(+)		WP_003416006.1	hypoxanthine phosphoribosyltransferase	90.7	66.9	58.1
MGA_82	LOCUS_0810	sequence001:51496..52218(+)	partial			Q6F1W5	energy-coupling factor transporter ATP-binding protein EcfA1	98.8	59.4	51.0
MGA_84	LOCUS_0830	sequence001:53115..53393(+)	internal_stop_codon	53391..53393(+),53412..53414(+),53409..53411(+)		A5I7H3	energy-coupling factor transporter transmembrane protein EcfT	90.2	31.1	28.9
MGA_85	LOCUS_0840	sequence001:53451..53945(+)	partial			WP_011183051.1	ABC transporter permease	92.7	45.8	52.0
MGA_87	LOCUS_0860	sequence001:54398..54670(+)	internal_stop_codon	54347..54349(+),54239..54241(+)		Q182D6	ribosomal RNA small subunit methyltransferase E	81.1	32.5	41.5
MGA_89	LOCUS_0880	sequence001:55232..55429(+)	partial			Q83AX8	50S ribosomal protein L13	96.9	44.4	50.8
MGA_91	LOCUS_0900	sequence001:56217..56441(-)	internal_stop_codon	56511..56513(-),56445..56447(-)		WP_011166365.1	leucyl aminopeptidase	97.3	16.2	43.8
MGA_92	LOCUS_0910	sequence001:56511..57002(-)	internal_stop_codon	56511..56513(-),57141..57143(-),56445..56447(-)		WP_011182967.1	peptidase M17	99.4	35.9	55.6
MGA_96	LOCUS_0950	sequence001:59409..59606(-)	internal_stop_codon	59409..59411(-),59226..59228(-),59376..59378(-),59292..59294(-)		Q8KG75	glycerol-3-phosphate acyltransferase	78.5	22.0	49.0
MGA_97	LOCUS_0960	sequence001:59792..60160(+)	internal_stop_codon	60158..60160(+),59771..59773(+)		WP_001557340.1	DNA topoisomerase IV subunit B	100.0	18.4	51.6
MGA_98	LOCUS_0970	sequence001:60236..60514(+)	internal_stop_codon	60158..60160(+),60731..60733(+),60512..60514(+)		Q81AH1	DNA topoisomerase 4 subunit B	100.0	13.9	48.9
MGA_99	LOCUS_0980	sequence001:60542..60733(+)	internal_stop_codon	60512..60514(+),60731..60733(+)		F9UPH6	DNA topoisomerase 4 subunit B	96.8	9.1	67.2
MGA_100	LOCUS_0990	sequence001:60923..61309(+)	internal_stop_codon	61523..61525(+),61307..61309(+),60731..60733(+),61403..61405(+)		H7C794	DNA topoisomerase 4 subunit B	100.0	18.7	78.9
MGA_103	LOCUS_1020	sequence001:62887..63072(+)	internal_stop_codon	63124..63126(+),63070..63072(+)		P61055	50S ribosomal protein L4	77.0	22.7	59.6
MGA_106	LOCUS_1050	sequence001:63978..64601(+)	internal_stop_codon	64734..64736(+),64599..64601(+)		P60426	50S ribosomal protein L2	100.0	73.6	69.6
MGA_108	LOCUS_1070	sequence001:65859..66056(+)	internal_stop_codon	66054..66056(+)		D3HB85	30S ribosomal protein S3	98.5	29.5	71.9
MGA_109	LOCUS_1080	sequence001:66092..66214(+)	internal_stop_codon	66212..66214(+),66368..66370(+)		Q6MSN2	50S ribosomal protein L16	92.5	27.0	64.9
MGA_116	LOCUS_1140	sequence002:404..940(+)	internal_stop_codon	938..940(+),377..379(+)		Q18B37	UPF0348 protein	98.9	45.8	35.9
MGA_122	LOCUS_1200	sequence002:2364..3392(-)	frameshift,internal_stop_codon	2999..3001(-),2363..2365(-)	3032,2935	WP_011861722.1	MATE family efflux transporter	98.2	69.1	22.1
MGA_126	LOCUS_1240	sequence002:4657..5022(+)	partial			WP_011182953.1	proline dipeptidase	95.9	49.1	48.3
MGA_127	LOCUS_1250	sequence002:5074..5643(-)	internal_stop_codon	5704..5706(-)		Q6MTY4	pyruvate kinase	98.4	38.5	52.2
MGA_128	LOCUS_1260	sequence002:5704..6240(-)	internal_stop_codon	5704..5706(-),6334..6336(-)		Q6F1U1	pyruvate kinase	99.4	37.0	56.5
MGA_129	LOCUS_1270	sequence002:6334..6498(-)	internal_stop_codon	6334..6336(-)		WP_048066546.1	pyruvate kinase	94.4	10.5	58.8
MGA_131	LOCUS_1290	sequence002:6791..7600(-)	internal_stop_codon	6791..6793(-)		Q6MTY5	ATP-dependent 6-phosphofructokinase	99.6	72.7	55.4
MGA_133	LOCUS_1310	sequence002:7993..8295(+)	internal_stop_codon	8293..8295(+),7987..7989(+),7864..7866(+)		Q818Z9	phosphopentomutase	94.0	23.4	52.1
MGA_134	LOCUS_1320	sequence002:8404..8736(+)	internal_stop_codon	8293..8295(+),8860..8862(+),8734..8736(+)		Q8CNH9	phosphopentomutase	99.1	27.3	54.1
MGA_135	LOCUS_1330	sequence002:8937..9161(-)	internal_stop_codon	9165..9167(-)		Q6F160	Lon protease	97.3	9.1	56.9
MGA_136	LOCUS_1340	sequence002:9165..10208(-)	internal_stop_codon	10359..10361(-),10377..10379(-),9165..9167(-)		Q6F160	Lon protease	100.0	44.1	60.1
MGA_137	LOCUS_1350	sequence002:10506..11246(-)	internal_stop_codon	10359..10361(-),10506..10508(-),10377..10379(-)		Q9X1W8	Lon protease	91.9	28.7	30.3
MGA_142	LOCUS_1400	sequence002:13775..14236(-)	internal_stop_codon	13775..13777(-),13565..13567(-)		P75472	hypothetical protein	75.8	22.3	32.5
MGA_145	LOCUS_1430	sequence002:15487..17118(-)	internal_stop_codon	17131..17133(-)		Q8CPY9	UvrABC system protein A	99.6	57.3	61.4
MGA_146	LOCUS_1440	sequence002:17131..17286(-)	internal_stop_codon	17131..17133(-),17362..17364(-)		Q6F258	UvrABC system protein A	100.0	5.4	52.9
MGA_147	LOCUS_1450	sequence002:17362..18321(-)	internal_stop_codon	17131..17133(-),17362..17364(-)		Q6MS39	UvrABC system protein A	100.0	34.2	55.9
MGA_148	LOCUS_1460	sequence002:18323..19471(-)	internal_stop_codon	19673..19675(-)		WP_011182955.1	excinuclease ABC subunit B	99.5	62.3	56.3
MGA_149	LOCUS_1470	sequence002:19673..19930(-)	internal_stop_codon	19940..19942(-),19673..19675(-)		WP_011182955.1	excinuclease ABC subunit B	100.0	13.8	45.9
MGA_150	LOCUS_1480	sequence002:19940..20284(-)	internal_stop_codon	19940..19942(-)		Q9A462	UvrABC system protein B	97.4	14.8	70.3
MGA_151	LOCUS_1490	sequence002:20368..20970(-)	internal_stop_codon	20980..20982(-)		Q8CPL4	UvrABC system protein C	99.0	34.5	36.7
MGA_152	LOCUS_1500	sequence002:20980..21498(-)	internal_stop_codon	21562..21564(-),20980..20982(-)		Q835H1	UvrABC system protein C	100.0	29.6	28.8
MGA_153	LOCUS_1510	sequence002:21562..21978(-)	internal_stop_codon	22030..22032(-)		A0A0H3MW45	UvrABC system protein C	86.2	19.9	42.9
MGA_155	LOCUS_1530	sequence002:22641..23036(-)	internal_stop_codon	23058..23060(-),23304..23306(-),23118..23120(-),22641..22643(-),23259..23261(-),23184..23186(-)		Q97EW5	methionine--tRNA ligase	100.0	20.3	41.2
MGA_156	LOCUS_1540	sequence002:23427..23573(-)	internal_stop_codon	23259..23261(-),23304..23306(-),23184..23186(-),23427..23429(-),23700..23702(-)		Q3XXC3	methionine--tRNA ligase	97.9	7.9	58.5
MGA_158	LOCUS_1560	sequence002:24873..25322(-)	partial			Q5FHY0	aspartate--ammonia ligase	99.3	44.3	28.2
MGA_161	LOCUS_1590	sequence002:26337..27047(-)	internal_stop_codon	27240..27242(-),27066..27068(-),27132..27134(-)		WP_011183560.1	putrescine/ornithine APC transporter	58.9	24.4	28.2
MGA_163	LOCUS_1610	sequence002:27589..28203(-)	internal_stop_codon	27589..27591(-),28216..28218(-),28462..28464(-)		Q6MTB6	S-adenosylmethionine synthase	100.0	53.0	64.4
MGA_164	LOCUS_1620	sequence002:28462..28671(-)	internal_stop_codon	28216..28218(-),28462..28464(-)		Q73JR4	S-adenosylmethionine synthase	92.8	16.5	70.3
MGA_167	LOCUS_1650	sequence002:29945..30595(-)	internal_stop_codon	29795..29797(-),29945..29947(-)		WP_011263302.1	PTS glucose transporter subunit IIBC	89.8	35.9	34.9
MGA_170	LOCUS_1680	sequence002:32193..32570(-)	internal_stop_codon	32193..32195(-),32832..32834(-),32577..32579(-)		A0QU89	N-acetylglucosamine-6-phosphate deacetylase	98.4	32.2	33.9
MGA_171	LOCUS_1690	sequence002:32577..32825(-)	internal_stop_codon	32832..32834(-),32577..32579(-)		YP_001701115.1	N-acetylglucosamine-6-phosphate deacetylase NagA	95.1	27.1	44.3
MGA_172	LOCUS_1700	sequence002:32832..33185(-)	internal_stop_codon	32832..32834(-),32577..32579(-)		Q8Y5F6	N-acetylglucosamine-6-phosphate deacetylase	99.1	34.0	33.3
MGA_174	LOCUS_1720	sequence002:33955..34320(-)	internal_stop_codon	34369..34371(-)		WP_001121760.1	phosphopyruvate hydratase	98.3	27.4	69.7
MGA_175	LOCUS_1730	sequence002:34369..35130(-)	internal_stop_codon	35149..35151(-),34369..34371(-)		Q88YH3	enolase 1	99.2	52.3	55.8
MGA_176	LOCUS_1740	sequence002:35149..35349(-)	internal_stop_codon	35149..35151(-)		Q6MTZ2	enolase	80.3	11.8	75.5
MGA_180	LOCUS_1780	sequence002:36850..37155(-)	internal_stop_codon	36850..36852(-),37435..37437(-),37429..37431(-),37162..37164(-),37249..37251(-),36709..36711(-),36706..36708(-),37294..37296(-),37291..37293(-)		WP_011167016.1	PTS sugar transporter	72.3	10.8	54.8
MGA_182	LOCUS_1800	sequence002:37690..38139(-)	internal_stop_codon	37435..37437(-),37429..37431(-),37561..37563(-),37690..37692(-)		P75569	PTS system glucose-specific EIICBA component	61.1	9.7	48.4
MGA_187	LOCUS_1850	sequence002:40480..40611(-)	internal_stop_codon	40672..40674(-),40366..40368(-),40480..40482(-)		A3CP56	threonine--tRNA ligase	95.3	6.3	78.0
MGA_188	LOCUS_1860	sequence002:40672..41040(-)	internal_stop_codon	40672..40674(-),41059..41061(-),41323..41325(-),40480..40482(-)		Q6F1T9	threonine--tRNA ligase	100.0	19.4	56.0
MGA_190	LOCUS_1880	sequence002:41374..41796(-)	internal_stop_codon	41323..41325(-),41374..41376(-)		Q9WZJ9	threonine--tRNA ligase	94.3	20.6	46.1
MGA_191	LOCUS_1890	sequence002:42144..42284(+)	internal_stop_codon	42282..42284(+)		WP_011963868.1	hypothetical protein	100.0	34.8	63.0
MGA_192	LOCUS_1900	sequence002:42306..42542(+)	internal_stop_codon	42282..42284(+)		WP_011963868.1	hypothetical protein	97.4	58.3	73.1
MGA_196	LOCUS_1940	sequence002:44168..45235(-)	partial			P75551	oligopeptide transport ATP-binding protein OppF	49.0	20.4	50.6
MGA_198	LOCUS_1960	sequence002:46049..46507(-)	partial			P75551	oligopeptide transport ATP-binding protein OppF	86.2	15.4	43.5
MGA_199	LOCUS_1970	sequence002:46608..46796(-)	internal_stop_codon	46608..46610(-),46803..46805(-)		WP_003722316.1	ABC transporter ATP-binding protein	100.0	17.3	54.8
MGA_200	LOCUS_1980	sequence002:46803..47264(-)	internal_stop_codon	46803..46805(-)		WP_012258124.1	ABC transporter ATP-binding protein	100.0	45.0	57.5
MGA_201	LOCUS_1990	sequence002:47310..47735(-)	partial			P75552	oligopeptide transport ATP-binding protein OppD	53.2	17.0	44.0
MGA_202	LOCUS_2000	sequence002:47748..48008(-)	internal_stop_codon	48120..48122(-),48135..48137(-),48207..48209(-)		WP_003722317.1	peptide ABC transporter permease	96.5	23.8	39.8
MGA_204	LOCUS_2020	sequence002:48938..49525(-)	internal_stop_codon	49538..49540(-),49598..49600(-)		WP_003131640.1	peptide ABC transporter permease	67.7	43.6	40.9
MGA_205	LOCUS_2030	sequence002:49598..49990(-)	internal_stop_codon	49538..49540(-),49598..49600(-)		WP_002470381.1	peptide ABC transporter permease	98.5	39.6	35.9
MGA_211	LOCUS_2090	sequence002:52508..52789(-)	internal_stop_codon	52799..52801(-),52943..52945(-)		WP_004453998.1	oligoendopeptidase F	90.3	14.0	40.5
MGA_212	LOCUS_2100	sequence002:52943..53146(-)	internal_stop_codon	52799..52801(-),52943..52945(-),53291..53293(-),53198..53200(-)		WP_000244106.1	oligoendopeptidase F	98.5	11.0	43.9
MGA_218	LOCUS_2160	sequence002:57339..57746(-)	internal_stop_codon	57339..57341(-)		WP_009897651.1	amino acid permease	95.6	29.7	32.4
MGA_225	LOCUS_2220	sequence003:3799..4386(+)	internal_stop_codon	4384..4386(+)		Q8Y4H1	NADPH dehydrogenase	99.0	58.3	43.4
MGA_226	LOCUS_2230	sequence003:4396..4689(+)	internal_stop_codon	4384..4386(+)		WP_015705363.1	oxidoreductase	74.2	19.7	42.7
MGA_227	LOCUS_2240	sequence003:4938..5189(-)	internal_stop_codon	5247..5249(-)		WP_004193111.1	GTP-binding protein	97.6	12.3	65.4
MGA_228	LOCUS_2250	sequence003:5247..6743(-)	internal_stop_codon	5247..5249(-)		WP_003430621.1	GTP-binding protein	99.6	81.7	56.7
MGA_233	LOCUS_2300	sequence003:9973..10710(+)	internal_stop_codon	10708..10710(+)		Q6MTQ0	translation initiation factor IF-2	98.8	39.2	58.4
MGA_234	LOCUS_2310	sequence003:10753..11781(+)	internal_stop_codon	10708..10710(+)		P17889	translation initiation factor IF-2	99.1	48.5	48.1
MGA_238	LOCUS_2350	sequence003:13556..14077(+)	partial			Q97I47	riboflavin biosynthesis protein	100.0	61.1	28.1
MGA_242	LOCUS_2390	sequence003:17397..17564(+)	internal_stop_codon	17562..17564(+)		Q038J7	30S ribosomal protein S16	76.4	46.2	73.8
MGA_243	LOCUS_2400	sequence003:17670..18266(+)	internal_stop_codon	18264..18266(+)		Q8CQL4	tRNA (guanine-N(1)-)-methyltransferase	100.0	83.3	57.8
MGA_248	LOCUS_2450	sequence003:23137..23352(+)	partial			Q9ZCW3	hypothetical protein	60.6	17.3	48.8
MGA_251	LOCUS_2480	sequence003:26254..26616(+)	partial			WP_012258818.1	alpha/beta hydrolase	76.7	21.2	35.4
MGA_256	LOCUS_2530	sequence003:28763..29854(-)	internal_stop_codon	29993..29995(-),29861..29863(-),28763..28765(-)		Q6MTX7	dihydrolipoyl dehydrogenase	99.4	61.7	47.6
MGA_257	LOCUS_2540	sequence003:29993..30568(-)	internal_stop_codon	29993..29995(-),29861..29863(-)		Q6F275	dihydrolipoyl dehydrogenase	100.0	28.1	41.9
MGA_258	LOCUS_2550	sequence003:30663..31085(-)	internal_stop_codon	30663..30665(-),31161..31163(-),31215..31217(-)		P21883	dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex	99.3	31.4	43.2
MGA_261	LOCUS_2580	sequence003:32797..32961(-)	internal_stop_codon	32719..32721(-),33016..33018(-),32797..32799(-),32671..32673(-),32644..32646(-),32983..32985(-),33229..33231(-)		WP_011182936.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	98.1	14.3	58.5
MGA_263	LOCUS_2600	sequence003:33780..34529(-)	internal_stop_codon	34659..34661(-)		A5I2A5	lipoate--protein ligase	96.8	74.3	39.8
MGA_265	LOCUS_2620	sequence003:35762..36214(+)	internal_stop_codon	35747..35749(+),36260..36262(+),36212..36214(+)		F9UPI6	ribosome biogenesis GTPase A	100.0	52.8	40.7
MGA_293	LOCUS_2900	sequence003:51371..52090(+)	internal_stop_codon	52376..52378(+),52088..52090(+)		Q6F0E6	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	100.0	38.5	50.6
MGA_294	LOCUS_2910	sequence003:52151..52378(+)	internal_stop_codon	52376..52378(+),52088..52090(+)		Q6HAF3	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	100.0	11.9	66.7
MGA_295	LOCUS_2920	sequence003:52562..53209(+)	internal_stop_codon	52376..52378(+)		Q3XYK5	tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG	94.4	34.4	45.4
MGA_296	LOCUS_2930	sequence003:53358..53633(+)	partial			Q97DE2	ribosomal RNA large subunit methyltransferase H	97.8	61.0	52.6
MGA_297	LOCUS_2940	sequence003:53777..54187(+)	internal_stop_codon	54185..54187(+)		WP_011182983.1	Glu-tRNA amidotransferase subunit C	85.3	37.4	37.9
MGA_298	LOCUS_2950	sequence003:54215..54991(+)	internal_stop_codon	54989..54991(+),55196..55198(+),55049..55051(+),55028..55030(+)		Q18CD5	cysteine--tRNA ligase	62.0	35.3	42.7
MGA_301	LOCUS_2980	sequence003:55734..56231(+)	internal_stop_codon	56229..56231(+)		WP_010966431.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	95.8	68.7	33.5
MGA_302	LOCUS_2990	sequence003:56247..56438(+)	internal_stop_codon	56229..56231(+)		WP_000789074.1	23S rRNA methyltransferase	93.7	23.2	54.2
MGA_305	LOCUS_3020	sequence003:57460..57660(+)	internal_stop_codon	57658..57660(+)		Q6F226	transcription termination/antitermination protein NusG	100.0	31.6	40.9
MGA_320	LOCUS_3170	sequence004:10504..10764(-)	internal_stop_codon	10369..10371(-),10504..10506(-)		Q88YP6	thymidylate kinase	93.0	35.3	53.1
MGA_325	LOCUS_3220	sequence004:13994..14476(-)	internal_stop_codon	14522..14524(-)		Q3XYF1	orotate phosphoribosyltransferase	97.5	75.6	49.4
MGA_326	LOCUS_3230	sequence004:14586..14786(-)	internal_stop_codon	14835..14837(-)		Q83E06	orotidine 5'-phosphate decarboxylase	84.8	23.7	58.9
MGA_327	LOCUS_3240	sequence004:14835..15287(-)	internal_stop_codon	14835..14837(-)		Q8RG83	orotidine 5'-phosphate decarboxylase	96.7	62.4	37.2
MGA_328	LOCUS_3250	sequence004:15289..16146(-)	internal_stop_codon	16165..16167(-)		Q8RG85	dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	83.5	78.6	44.4
MGA_330	LOCUS_3270	sequence004:17789..18139(-)	internal_stop_codon	17789..17791(-),18161..18163(-)		P12425	glutamine synthetase	99.1	25.9	47.0
MGA_331	LOCUS_3280	sequence004:18161..18394(-)	internal_stop_codon	18161..18163(-),18440..18442(-)		F9Y3L5	glutamine synthetase	94.8	15.8	58.1
MGA_332	LOCUS_3290	sequence004:18440..19069(-)	internal_stop_codon	18161..18163(-),18440..18442(-)		Q2RIX8	glutamine synthetase	100.0	47.4	45.2
MGA_333	LOCUS_3300	sequence004:19131..19322(-)	internal_stop_codon	19431..19433(-),19131..19133(-),19365..19367(-)		P05654	aspartate carbamoyltransferase	100.0	20.7	54.0
MGA_334	LOCUS_3310	sequence004:19617..19814(-)	internal_stop_codon	19617..19619(-),19365..19367(-),19431..19433(-)		Q9CF79	aspartate carbamoyltransferase	98.5	20.6	59.4
MGA_335	LOCUS_3320	sequence004:20202..20558(-)	internal_stop_codon	20562..20564(-),20661..20663(-)		WP_001002387.1	NADPH-dependent oxidoreductase	88.1	43.9	43.0
MGA_337	LOCUS_3340	sequence004:20976..21131(+)	internal_stop_codon	21213..21215(+),21354..21356(+),21222..21224(+),21156..21158(+),21129..21131(+)		Q6F145	thymidylate synthase	100.0	17.7	76.5
MGA_338	LOCUS_3350	sequence004:21468..21842(+)	internal_stop_codon	21444..21446(+),21222..21224(+),21213..21215(+),21354..21356(+)		Q64PV5	thymidylate synthase	100.0	47.0	71.0
MGA_341	LOCUS_3380	sequence004:22673..22921(-)	internal_stop_codon	23189..23191(-),23009..23011(-),22673..22675(-),22469..22471(-),22382..22384(-),22394..22396(-)		Q6F1H8	DNA polymerase III PolC-type	100.0	5.5	64.6
MGA_342	LOCUS_3390	sequence004:23009..23143(-)	internal_stop_codon	23189..23191(-),23009..23011(-)		Q6F1H8	DNA polymerase III PolC-type	97.7	2.9	53.5
MGA_343	LOCUS_3400	sequence004:23735..23881(-)	internal_stop_codon	23735..23737(-),23882..23884(-)		P63984	DNA polymerase III PolC-type	91.7	3.0	50.0
MGA_344	LOCUS_3410	sequence004:23882..24238(-)	internal_stop_codon	23735..23737(-),24308..24310(-),23882..23884(-)		Q6MTP4	DNA polymerase III PolC-type	89.0	7.1	43.8
MGA_346	LOCUS_3430	sequence004:24512..25051(-)	internal_stop_codon	24512..24514(-),24308..24310(-),25157..25159(-)		Q6MTP4	DNA polymerase III PolC-type	95.0	11.5	43.6
MGA_349	LOCUS_3460	sequence004:26307..26609(-)	internal_stop_codon	26640..26642(-)		Q6HEZ3	phosphatidate cytidylyltransferase	71.0	27.0	40.8
MGA_352	LOCUS_3490	sequence004:27834..28325(-)	internal_stop_codon	28383..28385(-)		Q1WUG5	uridylate kinase	95.1	64.2	52.3
MGA_354	LOCUS_3510	sequence004:28895..29218(-)	internal_stop_codon	29372..29374(-)		Q6HEW8	signal recognition particle receptor FtsY	100.0	32.5	57.9
MGA_355	LOCUS_3520	sequence004:29372..30121(-)	internal_stop_codon	29372..29374(-)		Q8Y693	signal recognition particle receptor FtsY	63.1	47.9	49.0
MGA_359	LOCUS_3560	sequence004:31296..31751(-)	internal_stop_codon	31824..31826(-)		P61345	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	91.4	29.0	38.1
MGA_360	LOCUS_3570	sequence004:31824..32711(-)	internal_stop_codon	31824..31826(-)		Q6F1V4	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B	99.7	61.8	57.4
MGA_363	LOCUS_3600	sequence004:33475..34008(-)	internal_stop_codon	33475..33477(-),33328..33330(-)		B8E2U5	glutamyl-tRNA(Gln) amidotransferase subunit A	84.2	31.1	55.3
MGA_365	LOCUS_3620	sequence004:34294..35070(-)	internal_stop_codon	35083..35085(-)		Q74ER9	DNA ligase	95.0	37.0	41.9
MGA_366	LOCUS_3630	sequence004:35083..36138(-)	internal_stop_codon	35083..35085(-),36199..36201(-)		Q6F1V7	DNA ligase	95.4	50.8	57.1
MGA_370	LOCUS_3660	sequence004:38390..38614(-)	internal_stop_codon	38621..38623(-)		WP_000040051.1	phosphoenolpyruvate--protein phosphotransferase	94.6	12.2	60.0
MGA_371	LOCUS_3670	sequence004:38621..39151(-)	internal_stop_codon	38621..38623(-),39200..39202(-)		Q6F0U6	phosphoenolpyruvate-protein phosphotransferase	100.0	30.4	68.8
MGA_372	LOCUS_3680	sequence004:39200..39781(-)	internal_stop_codon	39815..39817(-),39200..39202(-)		WP_000040051.1	phosphoenolpyruvate--protein phosphotransferase	97.9	33.0	59.8
MGA_373	LOCUS_3690	sequence004:39815..40114(-)	internal_stop_codon	39815..39817(-)		Q6F0U6	phosphoenolpyruvate-protein phosphotransferase	93.9	16.4	47.9
MGA_377	LOCUS_3730	sequence004:42167..42757(-)	internal_stop_codon	42770..42772(-)		A5I0W6	magnesium transporter MgtE	76.5	28.8	40.7
MGA_378	LOCUS_3740	sequence004:42770..43603(-)	internal_stop_codon	42770..42772(-)		Q8RDN1	magnesium transporter MgtE	97.5	60.4	36.5
MGA_385	LOCUS_3800	sequence005:1510..1935(-)	internal_stop_codon	1984..1986(-),1510..1512(-),2152..2154(-),2026..2028(-)		WP_011183563.1	ribose ABC transporter permease	97.2	22.7	29.8
MGA_387	LOCUS_3820	sequence005:2152..2655(-)	internal_stop_codon	1984..1986(-),2152..2154(-),2026..2028(-)		WP_002679664.1	ABC transporter permease	80.2	36.7	38.5
MGA_388	LOCUS_3830	sequence005:2648..2899(-)	internal_stop_codon	3107..3109(-)		WP_011183564.1	sugar ABC transporter	95.2	15.5	55.7
MGA_389	LOCUS_3840	sequence005:3107..4291(-)	internal_stop_codon	3107..3109(-)		WP_003549479.1	sugar ABC transporter	99.7	68.4	44.5
MGA_390	LOCUS_3850	sequence005:4545..5282(-)	internal_stop_codon	5415..5417(-)		WP_011183565.1	xylose ABC transporter substrate-binding protein	96.3	54.5	28.1
MGA_395	LOCUS_3900	sequence005:7933..8397(+)	internal_stop_codon	7855..7857(+)		Q6F1Z6	deoxyribose-phosphate aldolase 1	94.8	66.4	56.8
MGA_398	LOCUS_3930	sequence005:10175..10474(-)	internal_stop_codon	10064..10066(-),10175..10177(-),10544..10546(-),10697..10699(-)		WP_004529996.1	ribonucleotide reductase	82.8	9.8	43.2
MGA_412	LOCUS_4070	sequence005:17177..17923(-)	partial			WP_011167069.1	ABC transporter permease	98.8	45.2	29.2
MGA_414	LOCUS_4090	sequence005:19177..19425(-)	internal_stop_codon	19426..19428(-)		Q82YY9	serine--tRNA ligase 2	100.0	19.6	66.3
MGA_415	LOCUS_4100	sequence005:19426..19614(-)	internal_stop_codon	19426..19428(-),19762..19764(-)		Q81JC4	serine--tRNA ligase	98.4	14.4	63.9
MGA_416	LOCUS_4110	sequence005:19762..20445(-)	internal_stop_codon	19762..19764(-)		P37464	serine--tRNA ligase	99.6	52.9	44.5
MGA_422	LOCUS_4170	sequence005:24646..24798(-)	internal_stop_codon	24808..24810(-)		Q6HPZ9	DNA gyrase subunit B	100.0	7.8	64.0
MGA_423	LOCUS_4180	sequence005:24808..26088(-)	internal_stop_codon	24808..24810(-),26152..26154(-),26128..26130(-)		Q8YAV7	DNA gyrase subunit B	99.1	65.8	59.8
MGA_424	LOCUS_4190	sequence005:26152..26397(-)	internal_stop_codon	26428..26430(-),26152..26154(-),26128..26130(-)		A0KEE9	DNA gyrase subunit B	97.5	9.8	65.8
MGA_427	LOCUS_4220	sequence005:28096..28539(-)	internal_stop_codon	28069..28071(-),28096..28098(-)		WP_011860884.1	MATE family efflux transporter	81.6	26.3	29.2
MGA_429	LOCUS_4240	sequence005:29022..29162(+)	internal_stop_codon	29160..29162(+),29007..29009(+)		WP_005903944.1	cytidine deaminase	100.0	27.0	61.7
MGA_438	LOCUS_4320	sequence006:3393..4106(+)	internal_stop_codon	4104..4106(+)		Q9WYC4	putative ABC transporter ATP-binding protein	90.7	36.0	25.0
MGA_441	LOCUS_4350	sequence006:4784..5056(+)	internal_stop_codon	5054..5056(+),5108..5110(+)		Q8Y747	endoribonuclease YbeY	84.4	52.8	36.5
MGA_442	LOCUS_4360	sequence006:5401..5616(+)	internal_stop_codon	5293..5295(+),5368..5370(+),5392..5394(+)		Q8DIJ9	diacylglycerol kinase	85.9	39.2	41.9
MGA_445	LOCUS_4390	sequence006:7265..7474(+)	internal_stop_codon	7205..7207(+),7472..7474(+),7208..7210(+),7154..7156(+)		Q6F1J8	glycine--tRNA ligase	84.1	12.9	51.7
MGA_446	LOCUS_4400	sequence006:7499..8413(+)	internal_stop_codon	7472..7474(+)		Q6HBZ1	glycine--tRNA ligase	100.0	66.2	62.5
MGA_447	LOCUS_4410	sequence006:8641..9888(+)	internal_stop_codon	8602..8604(+)		Q6MTE3	DNA primase	92.8	63.9	34.9
MGA_450	LOCUS_4440	sequence006:11002..11505(+)	internal_stop_codon	10936..10938(+),10897..10899(+),10933..10935(+)		P06224	RNA polymerase sigma factor SigA	98.8	42.0	51.5
MGA_454	LOCUS_4480	sequence006:12836..13381(+)	internal_stop_codon	13610..13612(+),13379..13381(+)		Q6MUC7	putative endonuclease 4	98.9	63.7	41.4
MGA_455	LOCUS_4490	sequence006:13460..13612(+)	internal_stop_codon	13610..13612(+),13379..13381(+)		Q3XX40	putative endonuclease 4	100.0	16.7	64.0
MGA_457	LOCUS_4510	sequence006:14285..14980(+)	internal_stop_codon	14027..14029(+)		WP_000411056.1	peptidase M24	96.1	62.6	52.3
MGA_458	LOCUS_4520	sequence006:15494..15655(+)	internal_stop_codon	15791..15793(+),15653..15655(+)		Q1WUJ6	elongation factor P	100.0	28.6	52.8
MGA_459	LOCUS_4530	sequence006:15806..16054(+)	internal_stop_codon	15791..15793(+),15653..15655(+)		Q6MTF7	elongation factor P	98.8	44.0	43.2
MGA_461	LOCUS_4550	sequence006:16360..16518(+)	internal_stop_codon	16516..16518(+)		Q6F1B7	transketolase	86.5	6.9	66.7
MGA_462	LOCUS_4560	sequence006:16717..17163(+)	internal_stop_codon	17161..17163(+),16516..16518(+),17386..17388(+)		Q8Y7H4	transketolase	93.9	22.0	51.4
MGA_464	LOCUS_4580	sequence006:17428..17907(+)	internal_stop_codon	17905..17907(+),17386..17388(+)		Q6HG38	transketolase	97.5	23.6	56.1
MGA_470	LOCUS_4640	sequence006:19312..19842(+)	internal_stop_codon	19285..19287(+)		WP_012544951.1	TlyA family rRNA (cytidine-2'-O)-methyltransferase	95.5	68.3	43.8
MGA_472	LOCUS_4660	sequence006:20243..20557(+)	internal_stop_codon	20555..20557(+),20228..20230(+),20189..20191(+)		A0A0H3CJ34	cysteine desulfurase	95.2	24.9	37.6
MGA_473	LOCUS_4670	sequence006:20618..20890(+)	internal_stop_codon	20555..20557(+),20888..20890(+)		Q8Y4M4	cysteine desulfurase	86.7	20.1	39.8
MGA_475	LOCUS_4690	sequence006:21135..21389(+)	internal_stop_codon	21120..21122(+)		WP_011183146.1	iron-sulfur cluster assembly scaffold protein	92.9	54.9	35.9
MGA_476	LOCUS_4700	sequence006:21435..21773(+)	internal_stop_codon	21873..21875(+),21954..21956(+),21999..22001(+),21771..21773(+)		P54545	DNA polymerase IV 1	98.2	26.8	42.0
MGA_478	LOCUS_4720	sequence006:22795..23184(+)	internal_stop_codon	23182..23184(+)		WP_011085281.1	membrane protein	93.8	66.7	41.1
MGA_483	LOCUS_4770	sequence006:25133..25489(+)	internal_stop_codon	25628..25630(+),25487..25489(+)		WP_003440236.1	PTS sugar transporter subunit IID	90.7	29.8	29.9
MGA_489	LOCUS_4830	sequence007:267..716(-)	partial			Q6F1S8	translation initiation factor IF-3	88.6	73.9	56.4
MGA_491	LOCUS_4850	sequence007:1847..2167(-)	internal_stop_codon	2240..2242(-)		Q81IQ7	adenylosuccinate lyase	88.7	21.7	42.9
MGA_492	LOCUS_4860	sequence007:2240..2653(-)	internal_stop_codon	2873..2875(-),2663..2665(-),2240..2242(-)		Q8Y6B8	adenylosuccinate lyase	100.0	31.9	64.2
MGA_493	LOCUS_4870	sequence007:2663..2800(-)	internal_stop_codon	2873..2875(-),3068..3070(-),2663..2665(-)		Q9CF40	adenylosuccinate lyase	97.8	10.2	56.8
MGA_494	LOCUS_4880	sequence007:2873..3067(-)	internal_stop_codon	3095..3097(-),2873..2875(-),3068..3070(-),2663..2665(-)		Q03A61	adenylosuccinate lyase	100.0	14.6	57.8
MGA_495	LOCUS_4890	sequence007:3507..4232(-)	internal_stop_codon	3303..3305(-),4401..4403(-),3507..3509(-)		P65888	adenylosuccinate synthetase	100.0	56.1	49.6
MGA_499	LOCUS_4930	sequence007:6704..7159(-)	internal_stop_codon	7196..7198(-),7166..7168(-)		Q6MSB4	carbamate kinase	100.0	49.0	51.3
MGA_500	LOCUS_4940	sequence007:7196..7639(-)	internal_stop_codon	7196..7198(-),7166..7168(-)		Q6MSR9	carbamate kinase	96.6	45.8	59.9
MGA_501	LOCUS_4950	sequence007:7754..8266(-)	partial			WP_013095368.1	C4-dicarboxylate ABC transporter	86.5	28.3	36.5
MGA_503	LOCUS_4970	sequence007:8855..9115(-)	internal_stop_codon	8855..8857(-),9170..9172(-),9134..9136(-)		WP_009889640.1	C4-dicarboxylate ABC transporter	86.0	15.9	52.7
MGA_504	LOCUS_4980	sequence007:9297..9542(-)	internal_stop_codon	9582..9584(-),9606..9608(-)		P75473	ornithine carbamoyltransferase, catabolic	98.8	23.1	58.8
MGA_505	LOCUS_4990	sequence007:9606..9899(-)	internal_stop_codon	9933..9935(-),9582..9584(-),9606..9608(-),9912..9914(-)		D1BA59	ornithine carbamoyltransferase, catabolic	100.0	30.3	55.7
MGA_506	LOCUS_5000	sequence007:9933..10310(-)	internal_stop_codon	9933..9935(-),9912..9914(-)		Q73P70	ornithine carbamoyltransferase, catabolic	97.6	36.1	61.5
MGA_507	LOCUS_5010	sequence007:10522..11547(-)	internal_stop_codon	10522..10524(-)		A3CLW6	arginine deiminase	99.4	83.6	41.4
MGA_509	LOCUS_5030	sequence007:12414..12596(-)	internal_stop_codon	12711..12713(-),12801..12803(-),12732..12734(-),12642..12644(-),12414..12416(-),12375..12377(-)		Q6MTU2	valine--tRNA ligase	100.0	7.8	41.2
MGA_510	LOCUS_5040	sequence007:12801..12965(-)	internal_stop_codon	13053..13055(-),13194..13196(-),12711..12713(-),13092..13094(-),13239..13241(-),13173..13175(-),12975..12977(-),13122..13124(-),13218..13220(-),12801..12803(-),12732..12734(-),12642..12644(-)		Q817R6	valine--tRNA ligase	100.0	6.1	85.2
MGA_511	LOCUS_5050	sequence007:13344..13754(-)	internal_stop_codon	13053..13055(-),13194..13196(-),13890..13892(-),13092..13094(-),13239..13241(-),13173..13175(-),13344..13346(-),14028..14030(-),13218..13220(-),13122..13124(-),13821..13823(-)		Q82ZW6	valine--tRNA ligase	100.0	15.6	46.0
MGA_519	LOCUS_5130	sequence007:17202..17906(-)	internal_stop_codon	18018..18020(-)		WP_011261688.1	lactate dehydrogenase	94.9	65.9	43.2
MGA_520	LOCUS_5140	sequence007:18018..18230(-)	internal_stop_codon	18018..18020(-)		WP_011261688.1	lactate dehydrogenase	98.6	21.1	47.1
MGA_521	LOCUS_5150	sequence007:18315..18758(+)	internal_stop_codon	18804..18806(+),18756..18758(+)		WP_011167183.1	hypothetical protein	95.9	56.1	31.2
MGA_528	LOCUS_5220	sequence007:24096..25124(-)	internal_stop_codon	25125..25127(-)		Q6F204	ATP synthase subunit alpha	76.3	49.7	65.9
MGA_529	LOCUS_5230	sequence007:25125..25871(-)	internal_stop_codon	25125..25127(-)		Q6F204	ATP synthase subunit alpha	100.0	47.2	65.7
MGA_531	LOCUS_5250	sequence007:26413..26790(-)	internal_stop_codon	26806..26808(-)		O05098	ATP synthase subunit b	99.2	78.0	28.2
MGA_532	LOCUS_5260	sequence007:26961..27284(-)	partial			Q180X0	ATP synthase subunit c	43.0	53.5	54.3
MGA_537	LOCUS_5310	sequence008:1553..1795(+)	internal_stop_codon	1958..1960(+),1793..1795(+),1934..1936(+)		WP_011986588.1	cytosine deaminase	96.2	19.0	46.2
MGA_539	LOCUS_5330	sequence008:2060..2491(+)	internal_stop_codon	1958..1960(+),1793..1795(+),2489..2491(+),1934..1936(+)		WP_011986588.1	cytosine deaminase	99.3	33.5	53.5
MGA_540	LOCUS_5340	sequence008:2498..2758(+)	internal_stop_codon	2489..2491(+)		WP_005477214.1	cytosine deaminase	96.5	19.8	45.2
MGA_541	LOCUS_5350	sequence008:2926..3165(+)	internal_stop_codon	3163..3165(+)		Q039L1	ribonuclease J	100.0	14.1	51.9
MGA_542	LOCUS_5360	sequence008:3172..4572(+)	internal_stop_codon	3163..3165(+)		WP_011182989.1	RNase J family beta-CASP ribonuclease	99.8	81.2	28.2
MGA_544	LOCUS_5380	sequence008:5116..6234(+)	internal_stop_codon	6232..6234(+)		Q81A03	DNA translocase FtsK	90.6	44.0	39.0
MGA_545	LOCUS_5390	sequence008:6262..6738(+)	internal_stop_codon	6232..6234(+)		WP_011182997.1	DNA translocase (stage III sporulation protein E)	94.9	16.6	54.4
MGA_552	LOCUS_5460	sequence008:8796..9863(+)	internal_stop_codon	8775..8777(+)		P80698	trigger factor	94.1	79.2	40.7
MGA_553	LOCUS_5470	sequence008:10112..12103(+)	internal_stop_codon	12101..12103(+),12296..12298(+)		Q3XWJ6	protein translocase subunit SecA	95.5	75.5	53.2
MGA_555	LOCUS_5490	sequence008:12937..13413(+)	partial			Q8E0J5	HPr kinase/phosphorylase	100.0	50.8	39.6
MGA_560	LOCUS_5540	sequence008:15618..16094(+)	internal_stop_codon	16092..16094(+)		A0A0H2VHQ6	gluconeogenesis factor	98.1	45.9	43.2
MGA_561	LOCUS_5550	sequence008:16164..16550(+)	internal_stop_codon	16092..16094(+)		A5I7A1	putative gluconeogenesis factor	99.2	29.2	40.0
MGA_563	LOCUS_5570	sequence008:16780..16989(+)	internal_stop_codon	16987..16989(+)		Q6F251	putative sporulation transcription regulator WhiA	88.4	19.2	39.3
MGA_569	LOCUS_5630	sequence008:19138..19704(+)	internal_stop_codon	19702..19704(+)		A5HYC5	ribonuclease R	97.9	26.1	27.9
MGA_570	LOCUS_5640	sequence008:19876..21210(+)	internal_stop_codon	19702..19704(+)		Q5FLT5	ribonuclease R	99.8	56.6	42.0
MGA_571	LOCUS_5650	sequence008:21353..21622(+)	internal_stop_codon	21272..21274(+)		Q6MSC1	SsrA-binding protein	97.8	60.8	35.2
MGA_577	LOCUS_5700	sequence009:606..1370(-)	internal_stop_codon	1443..1445(-),606..608(-)		Q81J47	DNA-directed RNA polymerase subunit beta'	98.4	19.5	58.6
MGA_579	LOCUS_5720	sequence009:1671..2453(-)	internal_stop_codon	2622..2624(-),2709..2711(-)		D3HB36	DNA-directed RNA polymerase subunit beta'	69.2	14.9	37.6
MGA_581	LOCUS_5740	sequence009:2709..2966(-)	internal_stop_codon	3006..3008(-),2622..2624(-),2709..2711(-)		Q6F0L8	DNA-directed RNA polymerase subunit beta'	98.8	6.6	72.6
MGA_582	LOCUS_5750	sequence009:3006..3485(-)	internal_stop_codon	3006..3008(-),3723..3725(-)		Q6MRX5	DNA-directed RNA polymerase subunit beta'	86.8	9.6	39.9
MGA_583	LOCUS_5760	sequence009:3723..3923(-)	internal_stop_codon	3723..3725(-),3990..3992(-)		Q6MRX5	DNA-directed RNA polymerase subunit beta'	98.5	4.8	49.2
MGA_585	LOCUS_5780	sequence009:4340..5239(-)	internal_stop_codon	5285..5287(-),4340..4342(-)		A0A0H3N1M1	DNA-directed RNA polymerase subunit beta	99.7	25.0	63.4
MGA_586	LOCUS_5790	sequence009:5285..6487(-)	internal_stop_codon	6488..6490(-),5285..5287(-)		Q6F0L7	DNA-directed RNA polymerase subunit beta	97.8	30.5	54.5
MGA_587	LOCUS_5800	sequence009:6488..6988(-)	internal_stop_codon	7046..7048(-),7088..7090(-)		WP_041272205.1	DNA-directed RNA polymerase subunit beta	57.2	8.6	34.4
MGA_588	LOCUS_5810	sequence009:7088..7444(-)	internal_stop_codon	7046..7048(-),7088..7090(-)		Q6F0L7	DNA-directed RNA polymerase subunit beta	52.5	4.7	53.2
MGA_589	LOCUS_5820	sequence009:7571..7927(-)	partial			Q6MRX6	DNA-directed RNA polymerase subunit beta	82.2	6.7	28.9
MGA_598	LOCUS_5910	sequence009:12937..13245(-)	internal_stop_codon	12778..12780(-),12937..12939(-)		WP_011921814.1	glucohydrolase	100.0	19.4	34.9
MGA_600	LOCUS_5930	sequence009:13601..13921(-)	internal_stop_codon	13601..13603(-),13508..13510(-)		YP_001254901.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	99.1	44.7	46.7
MGA_606	LOCUS_5990	sequence009:17162..17515(-)	internal_stop_codon	17600..17602(-),17522..17524(-)		Q6MTJ6	GTPase Der	95.7	25.7	45.5
MGA_607	LOCUS_6000	sequence009:17600..18211(-)	internal_stop_codon	17600..17602(-),18329..18331(-),17522..17524(-)		Q8RGV7	GTPase Der	99.5	47.3	44.0
MGA_608	LOCUS_6010	sequence009:18329..18472(-)	internal_stop_codon	18329..18331(-)		A5I4V0	GTPase Der	100.0	10.7	72.3
MGA_609	LOCUS_6020	sequence009:18484..18657(-)	internal_stop_codon	18706..18708(-)		Q834T6	cytidylate kinase	98.2	24.8	42.9
MGA_610	LOCUS_6030	sequence009:18706..19134(-)	internal_stop_codon	18706..18708(-)		Q6HL58	cytidylate kinase	100.0	64.9	49.3
MGA_613	LOCUS_6060	sequence009:20439..20591(+)	internal_stop_codon	20589..20591(+)		P70947	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU	100.0	17.8	54.0
MGA_619	LOCUS_6120	sequence009:23146..23304(-)	internal_stop_codon	23146..23148(-)		WP_000365050.1	hypothetical protein	100.0	31.9	48.1
MGA_620	LOCUS_6130	sequence009:23354..23497(-)	internal_stop_codon	23528..23530(-),23660..23662(-),23582..23584(-),23636..23638(-)		Q3J5M3	50S ribosomal protein L20	93.6	36.7	63.6
MGA_622	LOCUS_6150	sequence010:871..1080(-)	internal_stop_codon	871..873(-),703..705(-)		WP_011392597.1	metallophosphoesterase	100.0	26.4	47.8
MGA_623	LOCUS_6160	sequence010:1274..2131(-)	internal_stop_codon	1274..1276(-)		P42444	protein RecA	97.2	79.6	61.7
MGA_628	LOCUS_6210	sequence010:3864..4349(-)	internal_stop_codon	4365..4367(-),3864..3866(-)		B8E0D8	phenylalanine--tRNA ligase beta subunit	90.7	19.5	27.7
MGA_630	LOCUS_6230	sequence010:4781..4951(-)	internal_stop_codon	5093..5095(-),4973..4975(-)		P17921	phenylalanine--tRNA ligase alpha subunit	96.4	16.0	60.0
MGA_631	LOCUS_6240	sequence010:5093..5311(-)	internal_stop_codon	5414..5416(-),4973..4975(-),5093..5095(-),5492..5494(-)		Q6F165	phenylalanine--tRNA ligase alpha subunit	98.6	22.0	51.9
MGA_633	LOCUS_6260	sequence010:6058..6741(-)	internal_stop_codon	6058..6060(-)		B8E253	33 kDa chaperonin	79.7	61.7	27.6
MGA_639	LOCUS_6320	sequence010:8245..8490(-)	internal_stop_codon	8515..8517(-),8491..8493(-)		P75389	putative NADH oxidase	97.5	16.3	59.5
MGA_640	LOCUS_6330	sequence010:8515..9087(-)	internal_stop_codon	9250..9252(-),8515..8517(-),8491..8493(-)		WP_011182934.1	NADH oxidase	97.9	41.4	45.2
MGA_642	LOCUS_6350	sequence010:9451..9591(-)	internal_stop_codon	9451..9453(-),9250..9252(-)		P75389	putative NADH oxidase	97.8	9.4	68.9
MGA_643	LOCUS_6360	sequence010:9732..10259(+)	internal_stop_codon	10257..10259(+)		Q5FJ12	acetate kinase	91.4	40.3	48.1
MGA_644	LOCUS_6370	sequence010:10275..10763(+)	internal_stop_codon	10761..10763(+),10257..10259(+)		P75245	acetate kinase	100.0	40.3	56.8
MGA_645	LOCUS_6380	sequence010:10999..12120(-)	internal_stop_codon	12127..12129(-)		P75167	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	97.1	72.2	47.6
MGA_646	LOCUS_6390	sequence010:12127..12513(-)	internal_stop_codon	12127..12129(-)		Q97L53	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	99.2	24.9	58.3
MGA_647	LOCUS_6400	sequence010:12562..12738(-)	internal_stop_codon	12784..12786(-),12817..12819(-)		Q6F0W1	triosephosphate isomerase	86.2	18.2	64.0
MGA_648	LOCUS_6410	sequence010:12817..13266(-)	internal_stop_codon	12784..12786(-),12817..12819(-),13270..13272(-)		P66943	triosephosphate isomerase	99.3	57.1	48.3
MGA_650	LOCUS_6430	sequence010:14228..14458(-)	internal_stop_codon	14468..14470(-)		Q8CTD6	phosphoglycerate kinase	100.0	19.2	71.1
MGA_651	LOCUS_6440	sequence010:14468..14872(-)	internal_stop_codon	14468..14470(-),15002..15004(-)		Q03AK6	phosphoglycerate kinase	99.3	33.6	59.4
MGA_652	LOCUS_6450	sequence010:15002..15415(-)	internal_stop_codon	15002..15004(-)		Q8Y4I2	phosphoglycerate kinase	99.3	34.3	64.0
MGA_657	LOCUS_6490	sequence011:1548..2309(+)	internal_stop_codon	1497..1499(+)		P75280	putative lipoprotein	63.2	18.9	28.8
MGA_661	LOCUS_6530	sequence011:3749..4537(+)	internal_stop_codon	3698..3700(+),4535..4537(+)		P75264	putative ABC transporter ATP-binding protein MG187 homolog	99.6	46.4	35.7
MGA_662	LOCUS_6540	sequence011:4559..5071(+)	internal_stop_codon	4535..4537(+)		P75264	putative ABC transporter ATP-binding protein MG187 homolog	99.4	29.2	37.6
MGA_664	LOCUS_6560	sequence011:5455..5625(+)	internal_stop_codon	5623..5625(+),5446..5448(+)		P75263	putative ABC transporter permease protein MG188 homolog	100.0	17.6	41.4
MGA_667	LOCUS_6590	sequence011:6596..6751(+)	frameshift,internal_stop_codon	6749..6751(+),6446..6448(+),6764..6766(+),6527..6529(+)	6330	WP_011031642.1	ABC transporter permease	100.0	16.1	52.9
MGA_670	LOCUS_6620	sequence011:7509..8144(+)	partial			P75295	hypothetical protein	78.2	27.8	32.1
MGA_681	LOCUS_6730	sequence012:1220..1924(+)	partial			Q99ZP4	release factor glutamine methyltransferase	80.3	71.7	39.0
MGA_683	LOCUS_6750	sequence012:2786..3385(-)	internal_stop_codon	3434..3436(-)		Q817G5	formamidopyrimidine-DNA glycosylase	90.5	65.9	45.6
MGA_688	LOCUS_6800	sequence012:6103..6327(+)	internal_stop_codon	6325..6327(+)		WP_048060820.1	peptidase M42	100.0	21.2	41.9
MGA_689	LOCUS_6810	sequence012:6445..7125(+)	internal_stop_codon	6325..6327(+)		WP_001076673.1	M42 family metallopeptidase	99.6	63.7	37.7
MGA_690	LOCUS_6820	sequence012:7171..7422(-)	partial			WP_012027099.1	haloacid dehalogenase	90.4	27.7	45.3
MGA_693	LOCUS_6850	sequence012:8981..9445(-)	internal_stop_codon	9617..9619(-),9641..9643(-)		Q6MU89	peptide chain release factor 1	97.4	41.2	57.0
MGA_694	LOCUS_6860	sequence012:9641..10063(-)	internal_stop_codon	9617..9619(-),9641..9643(-)		Q5FKZ0	peptide chain release factor 1	100.0	38.5	45.7
MGA_696	LOCUS_6880	sequence013:373..663(+)	internal_stop_codon	661..663(+)		Q8CRH2	50S ribosomal protein L5	100.0	53.6	60.4
MGA_702	LOCUS_6940	sequence013:2764..3057(+)	internal_stop_codon	2695..2697(+),2701..2703(+)		Q18CH3	30S ribosomal protein S5	100.0	56.8	49.5
MGA_703	LOCUS_6950	sequence013:3067..3237(+)	internal_stop_codon	3235..3237(+)		A5I7I7	50S ribosomal protein L15	100.0	38.4	64.3
MGA_704	LOCUS_6960	sequence013:3271..3510(+)	internal_stop_codon	3235..3237(+)		B8E1F1	50S ribosomal protein L15	93.7	50.0	45.9
MGA_705	LOCUS_6970	sequence013:3607..3915(+)	internal_stop_codon	4012..4014(+),3913..3915(+)		Q59548	protein translocase subunit SecY	89.2	19.1	44.0
MGA_706	LOCUS_6980	sequence013:4057..4473(+)	internal_stop_codon	4471..4473(+),4012..4014(+),3913..3915(+)		Q6F1X5	protein translocase subunit SecY	93.5	26.7	43.1
MGA_707	LOCUS_6990	sequence013:4486..4932(+)	internal_stop_codon	4471..4473(+)		Q6MSP4	protein translocase subunit SecY	73.0	22.6	42.2
MGA_788	LOCUS_7570	sequence040:178..444(-)	partial			WP_011948820.1	haloacid dehalogenase	92.0	30.7	38.3
MGA_789	LOCUS_7580	sequence040:718..1053(-)	partial			P75399	putative phosphatase	70.3	26.6	46.2
