# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence001:496..816(+)	frameshift,internal_stop_codon	423..425(+),870..872(+),281..283(+),320..322(+),942..944(+),858..860(+)	352,497,812,479	Q8P993	DNA translocase FtsK	97.2	13.5	46.7
MGA_31	LOCUS_00310	sequence001:37376..38005(-)	frameshift		38085,38021	WP_008769324.1	GntR family transcriptional regulator	99.5	73.8	43.3
MGA_38	LOCUS_00380	sequence001:48144..48617(+)	partial			WP_002216672.1	cytochrome	89.2	47.3	37.2
MGA_49	LOCUS_00490	sequence001:63145..63357(-)	partial			Q8ZJ07	UvrABC system protein A	80.0	5.9	57.1
MGA_58	LOCUS_00580	sequence001:74412..74948(+)	frameshift		74217	WP_003815212.1	endonuclease	96.6	67.2	52.8
MGA_59	LOCUS_00590	sequence001:75770..76525(-)	partial			B1GRJ9	pseudouridine synthase	89.6	55.4	54.0
MGA_86	LOCUS_00860	sequence001:115093..115485(-)	frameshift,internal_stop_codon	115582..115584(-)	115624	Q87S91	riboflavin biosynthesis protein	96.9	40.5	54.0
MGA_95	LOCUS_00950	sequence001:127131..128015(+)	partial			WP_011260947.1	DNA polymerase I	95.6	29.8	58.4
MGA_102	LOCUS_01020	sequence002:5691..7037(+)	partial			WP_011039015.1	two-component sensor histidine kinase	69.4	67.1	34.6
MGA_110	LOCUS_01100	sequence002:15944..16531(-)	frameshift		16547	WP_005771252.1	hypothetical protein	98.5	75.3	51.0
MGA_111	LOCUS_01110	sequence002:16515..16712(-)	frameshift		16547	WP_005771252.1	hypothetical protein	95.4	25.1	43.8
MGA_114	LOCUS_01140	sequence002:18458..19402(-)	partial			WP_003104128.1	hypothetical protein	79.9	71.6	50.6
MGA_185	LOCUS_01850	sequence002:104410..105570(-)	partial			WP_003090946.1	hypothetical protein	61.7	72.4	45.0
MGA_191	LOCUS_01910	sequence002:110797..111291(+)	internal_stop_codon	111289..111291(+)		Q4ZZH7	proline iminopeptidase	96.3	47.1	57.0
MGA_192	LOCUS_01920	sequence002:111355..111777(+)	internal_stop_codon	111289..111291(+)		Q4ZZH7	proline iminopeptidase	85.0	37.5	40.5
MGA_194	LOCUS_01940	sequence002:113091..113264(-)	partial			WP_010967319.1	cytochrome oxidase maturation protein, cbb3-type	57.9	38.4	63.6
MGA_200	LOCUS_01980	sequence003:5556..6845(+)	partial			Q8EJN8	acetyltransferase component of pyruvate dehydrogenase complex	98.8	64.7	48.9
MGA_216	LOCUS_02140	sequence003:30359..30694(+)	frameshift,internal_stop_codon	30287..30289(+),30226..30228(+),30356..30358(+),30678..30680(+)	30661,30158,30231	WP_011037914.1	AI-2E family transporter	86.5	26.0	44.6
MGA_225	LOCUS_02230	sequence003:39354..40331(-)	partial			WP_004198416.1	folate-binding protein YgfZ	68.6	71.3	35.2
MGA_258	LOCUS_02560	sequence003:87472..87648(-)	frameshift,internal_stop_codon	87714..87716(-),87204..87206(-),87471..87473(-)	87242,87419,87860,87191	Q5ZUD2	elongation factor 4	94.8	9.0	56.4
MGA_272	LOCUS_02700	sequence004:441..1007(-)	partial			Q8EER3	DNA translocase FtsK	92.0	18.4	38.5
MGA_274	LOCUS_02720	sequence004:4582..5127(+)	partial			WP_009940415.1	thiamine phosphate synthase	46.4	42.2	44.0
MGA_281	LOCUS_02790	sequence004:15416..16111(+)	partial			WP_010947301.1	protein TolA	94.4	64.8	29.5
MGA_283	LOCUS_02810	sequence004:17456..18052(+)	partial			WP_002118513.1	peptidoglycan-associated lipoprotein	53.0	56.5	49.5
MGA_284	LOCUS_02820	sequence004:18056..18922(+)	partial			WP_010939216.1	tol-pal system protein YbgF	81.6	69.2	22.1
MGA_299	LOCUS_02970	sequence004:40958..41515(-)	internal_stop_codon	40958..40960(-),40799..40801(-)		Q9HUL8	DNA mismatch repair protein MutL	100.0	29.9	48.7
MGA_311	LOCUS_03090	sequence004:56076..56915(-)	partial			Q88AG3	signal recognition particle receptor FtsY	98.9	53.8	63.4
MGA_349	LOCUS_03470	sequence005:25453..26151(+)	partial			Q9HVU1	cell shape-determining protein MreC	91.4	64.8	48.6
MGA_362	LOCUS_03600	sequence005:41118..42764(+)	partial			WP_011267265.1	DNA polymerase III subunit gamma/tau	66.1	48.9	58.0
MGA_375	LOCUS_03730	sequence005:59846..60715(+)	partial			WP_011268562.1	prephenate dehydrogenase	93.4	50.6	47.8
MGA_376	LOCUS_03740	sequence005:60734..62068(+)	internal_stop_codon	60713..60715(+),60716..60718(+)		F0KJ26	3-phosphoshikimate 1-carboxyvinyltransferase	95.9	57.9	56.8
MGA_412	LOCUS_04080	sequence006:31018..32598(+)	partial			WP_011073743.1	peptidase M16	98.3	54.4	28.4
MGA_418	LOCUS_04140	sequence006:41326..41910(+)	partial			WP_011268429.1	cytochrome biogenesis protein	88.7	68.7	40.7
MGA_420	LOCUS_04160	sequence006:44788..45480(-)	partial			WP_003094103.1	hypothetical protein	93.0	70.7	39.0
MGA_424	LOCUS_04200	sequence006:49632..50285(-)	partial			G3XDA7	cell division protein FtsQ	94.0	71.1	31.4
MGA_435	LOCUS_04310	sequence006:62908..63168(-)	partial			Q83F34	cell division protein FtsL	83.7	62.6	38.9
MGA_449	LOCUS_04440	sequence007:18895..20373(+)	partial			Q9HYB8	electron transport complex subunit C	99.0	62.8	45.7
MGA_457	LOCUS_04520	sequence007:31747..31983(-)	partial			NP_708853.1	hypothetical protein	100.0	67.2	51.3
MGA_497	LOCUS_04920	sequence008:25805..26293(-)	partial			Q5ZT09	glycerol-3-phosphate acyltransferase	98.1	57.4	45.3
MGA_498	LOCUS_04930	sequence008:26450..26818(+)	frameshift		26797	Q8RH42	7,8-dihydroneopterin aldolase	81.1	36.5	33.0
MGA_509	LOCUS_05040	sequence008:37527..37814(-)	partial			Q8P3H9	sec-independent protein translocase protein TatB	69.5	33.8	51.5
MGA_569	LOCUS_05630	sequence009:42032..42346(-)	partial			A0KF20	30S ribosomal protein S10	96.2	74.6	88.0
MGA_592	LOCUS_05840	sequence010:22951..23175(-)	partial			WP_010958034.1	preprotein translocase subunit YajC	98.6	62.9	54.8
MGA_628	LOCUS_06190	sequence011:29622..29849(+)	frameshift,internal_stop_codon	30054..30056(+)	29834,30074	Q83JK8	DNA topoisomerase 4 subunit B	94.7	11.3	52.1
MGA_629	LOCUS_06200	sequence011:29840..30055(+)	frameshift,internal_stop_codon	30054..30056(+)	29834,30236,30074	Q8EAK3	DNA topoisomerase 4 subunit B	98.6	11.1	60.0
MGA_630	LOCUS_06210	sequence011:31076..31291(+)	frameshift,internal_stop_codon	30882..30884(+),31333..31335(+),31297..31299(+)	31001,31247	Q5ZXP0	DNA topoisomerase 4 subunit B	97.2	11.0	44.9
MGA_631	LOCUS_06220	sequence011:32029..32457(+)	frameshift,internal_stop_codon	32485..32487(+),31929..31931(+)	32544,31793,31946,32426,32556	A0A0H3CRH6	DNA topoisomerase 4 subunit A	93.0	17.6	57.6
MGA_643	LOCUS_06330	sequence012:13947..14264(-)	internal_stop_codon	14265..14267(-)		K0M8F0	fumarate hydratase class I	94.3	19.7	54.0
MGA_644	LOCUS_06340	sequence012:14265..14603(-)	frameshift,internal_stop_codon	14264..14266(-)	14686	Q87NJ5	fumarate hydratase class I	99.1	22.0	63.1
MGA_645	LOCUS_06350	sequence012:14615..14893(-)	frameshift		14897,14684,14909	Q8PAR2	fumarate hydratase class I	79.3	14.1	53.4
MGA_646	LOCUS_06360	sequence012:14880..15245(-)	frameshift,internal_stop_codon	15378..15380(-)	14897,14684,14909	Q9HW68	fumarate hydratase class I	92.6	22.3	54.9
MGA_674	LOCUS_06630	sequence013:25098..25538(-)	frameshift,internal_stop_codon	25691..25693(-),25538..25540(-)	25645,25111	O24913	malate:quinone oxidoreductase	99.3	32.7	53.4
MGA_676	LOCUS_06650	sequence013:25831..26109(-)	frameshift,internal_stop_codon	25689..25691(-)	26192,25868,25646	P56954	putative malate:quinone oxidoreductase	94.6	19.4	43.7
MGA_677	LOCUS_06660	sequence013:28068..28388(-)	frameshift,internal_stop_codon	27975..27977(-),27891..27893(-),27915..27917(-),27813..27815(-)	28482,28595,28089,28410,28588	WP_011072574.1	ATP-dependent Clp protease ATP-binding subunit ClpA	93.4	13.1	50.5
MGA_678	LOCUS_06670	sequence013:28669..28986(-)	frameshift,internal_stop_codon	29052..29054(-)	28400,28673,29042,28484,28600,28587	WP_011037131.1	ATP-dependent Clp protease ATP-binding subunit ClpA	98.1	13.6	55.3
MGA_681	LOCUS_06700	sequence013:30429..>31253(-)	partial			WP_011203968.1	phosphoserine phosphatase SerB	74.5	36.1	54.1
MGA_700	LOCUS_06890	sequence014:25032..>25623(-)	partial			A0A0H3EP11	ATP synthase subunit beta	100.0	42.6	87.8
MGA_721	LOCUS_07100	sequence016:7036..7407(-)	partial			Q2RTQ3	S-adenosylmethionine decarboxylase proenzyme	75.6	54.1	38.7
MGA_724	LOCUS_07130	sequence016:10560..12917(-)	partial			Q51484	hypothetical protein	30.1	38.4	35.2
MGA_732	LOCUS_07210	sequence016:21530..21955(-)	partial			WP_002399687.1	DNA polymerase	84.4	17.5	39.5
MGA_736	LOCUS_07250	sequence017:5729..6373(+)	frameshift,internal_stop_codon	5605..5607(+)	5724	WP_011084482.1	hypothetical protein	88.3	63.9	38.2
MGA_768	LOCUS_07570	sequence019:12941..13123(-)	frameshift,internal_stop_codon	12941..12943(-),12851..12853(-)	12898,13148	WP_001389365.1	IS6 family transposase	98.3	22.8	55.7
MGA_771	LOCUS_07600	sequence019:16765..17097(+)	frameshift		17067	P94614	ribosomal RNA small subunit methyltransferase G	92.7	50.0	50.0
MGA_772	LOCUS_07610	sequence019:17121..17387(+)	frameshift		17082	Q8P3N0	ribosomal RNA small subunit methyltransferase G	97.7	41.0	36.8
MGA_773	LOCUS_07620	sequence019:18549..19034(+)	internal_stop_codon	18522..18524(+),18456..18458(+),18315..18317(+)		WP_001389365.1	IS6 family transposase	82.6	52.4	45.9
MGA_796	LOCUS_07840	sequence021:8775..9455(+)	partial			WP_000867994.1	acetyltransferase	63.7	51.7	41.7
MGA_801	LOCUS_07890	sequence021:13298..13954(+)	partial			WP_011073174.1	IS5 family transposase	97.2	71.0	57.3
MGA_815	LOCUS_08020	sequence023:1..1924(+)	partial			A0A0H2WF59	outer membrane protein assembly factor BamA	14.5	12.5	40.4
MGA_833	LOCUS_08190	sequence025:1122..1448(-)	partial			Q9HV52	protein-export membrane protein SecG	69.4	56.6	33.3
MGA_838	LOCUS_08240	sequence025:7693..8484(-)	internal_stop_codon	8533..8535(-)		Q4ZNQ1	carbamoyl-phosphate synthase (glutamine-hydrolyzing)	98.1	24.0	64.0
MGA_848	LOCUS_08330	sequence028:3210..3461(+)	internal_stop_codon	3459..3461(+)		WP_003689448.1	hypothetical protein	62.7	41.3	51.9
MGA_855	LOCUS_08360	sequence031:681..1187(+)	internal_stop_codon	669..671(+)		WP_010956917.1	hypothetical protein	75.6	47.6	52.8
MGA_859	LOCUS_08400	sequence032:890..3118(-)	partial			P44443	ribonuclease E	81.3	65.6	53.6
MGA_861	LOCUS_08410	sequence033:605..1849(-)	partial			WP_002213256.1	DDE transposase	45.4	24.4	62.8
MGA_901	LOCUS_08710	sequence043:1558..1908(+)	partial			WP_010871021.1	site-specific DNA-methyltransferase	58.6	26.4	39.0
MGA_945	LOCUS_09000	sequence055:384..1205(+)	internal_stop_codon	366..368(+),378..380(+)		Q9HX33	leucine--tRNA ligase	98.2	35.7	43.8
MGA_994	LOCUS_09280	sequence074:345..983(+)	partial			WP_010947086.1	hypothetical protein	78.3	44.1	45.8
MGA_1014	LOCUS_09370	sequence086:54..827(+)	internal_stop_codon	825..827(+)		WP_011108633.1	hybrid sensor histidine kinase/response regulator	100.0	22.2	20.9
MGA_1052	LOCUS_09510	sequence109:279..>1100(-)	partial			WP_000273909.1	type II restriction endonuclease subunit R	82.1	26.8	32.1