{ "tc_result": [ { "organism_name": "Rubrivirga marina", "strain": "strain=SAORIC-28", "accession": "GCA_002283365.1", "taxid": 1196024, "species_taxid": 1196024, "relation_to_type": "type", "validated": true, "ani": 77.9404, "matched_fragments": 327, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubricoccus marinus", "strain": "strain=SG-29", "accession": "GCA_002257665.1", "taxid": 716817, "species_taxid": 716817, "relation_to_type": "type", "validated": true, "ani": 77.8461, "matched_fragments": 273, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocaloribacter litoris", "strain": "strain=ISCAR-4553", "accession": "GCA_011682235.2", "taxid": 2558931, "species_taxid": 2558931, "relation_to_type": "type", "validated": true, "ani": 76.0364, "matched_fragments": 113, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter jeollabukensis", "strain": "strain=1-3-3-8", "accession": "GCA_005771675.1", "taxid": 2025313, "species_taxid": 2025313, "relation_to_type": "type", "validated": true, "ani": 75.0358, "matched_fragments": 56, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glycomyces buryatensis", "strain": "strain=18", "accession": "GCA_004912275.1", "taxid": 2570927, "species_taxid": 2570927, "relation_to_type": "type", "validated": true, "ani": 74.983, "matched_fragments": 63, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas mephitis", "strain": "strain=DSM 12574", "accession": "GCA_000422305.1", "taxid": 83615, "species_taxid": 83615, "relation_to_type": "type", "validated": true, "ani": 74.903, "matched_fragments": 72, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gaiella occulta", "strain": "strain=F2-233", "accession": "GCA_003351045.1", "taxid": 1002870, "species_taxid": 1002870, "relation_to_type": "type", "validated": true, "ani": 74.889, "matched_fragments": 91, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmatirosa kalamazoonensis", "strain": "strain=KBS708", "accession": "GCA_000522985.1", "taxid": 861299, "species_taxid": 861299, "relation_to_type": "type", "validated": true, "ani": 74.8422, "matched_fragments": 233, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 74.8373, "matched_fragments": 127, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter caeli", "strain": "strain=9A", "accession": "GCA_013294115.1", "taxid": 2735894, "species_taxid": 2735894, "relation_to_type": "type", "validated": true, "ani": 74.8235, "matched_fragments": 51, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium iners", "strain": "strain=DSM 19015", "accession": "GCA_022179305.1", "taxid": 418707, "species_taxid": 418707, "relation_to_type": "type", "validated": true, "ani": 74.8071, "matched_fragments": 75, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=DSM 21585", "accession": "GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 74.806, "matched_fragments": 164, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=USBA 355", "accession": "GCA_900177295.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 74.8033, "matched_fragments": 165, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crenobacter intestini", "strain": "strain=GY 70310", "accession": "GCA_004919095.1", "taxid": 2563443, "species_taxid": 2563443, "relation_to_type": "type", "validated": true, "ani": 74.7746, "matched_fragments": 61, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptoalloteichus tenebrarius", "strain": "strain=DSM 40477", "accession": "GCA_024171885.1", "taxid": 1933, "species_taxid": 1933, "relation_to_type": "type", "validated": true, "ani": 74.7734, "matched_fragments": 119, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glycomyces salinus", "strain": "strain=YIM 93776", "accession": "GCA_016428645.1", "taxid": 980294, "species_taxid": 980294, "relation_to_type": "type", "validated": true, "ani": 74.7685, "matched_fragments": 79, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura rupiterrae", "strain": "strain=DSM 45251", "accession": "GCA_024172125.1", "taxid": 559627, "species_taxid": 559627, "relation_to_type": "type", "validated": true, "ani": 74.7681, "matched_fragments": 179, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gulosibacter faecalis", "strain": "strain=B187", "accession": "GCA_000381765.1", "taxid": 272240, "species_taxid": 272240, "relation_to_type": "type", "validated": true, "ani": 74.7337, "matched_fragments": 69, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium phasiani", "strain": "strain=6T3", "accession": "GCA_019331775.1", "taxid": 2834431, "species_taxid": 2834431, "relation_to_type": "type", "validated": true, "ani": 74.7303, "matched_fragments": 59, "total_fragments": 608, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 71.53, "contamination": 8.33, "strain_heterogeneity": 50.0 }, "gtdb_result": [ { "accession": "GCF_002283555.1", "gtdb_species": "s__Rubrivirga sp002283555", "ani": 78.8001, "matched_fragments": 334, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubrivirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.32", "min_intra_species_ani": "98.29", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_012960515.1", "gtdb_species": "s__Rubricoccus sp012960515", "ani": 78.0474, "matched_fragments": 244, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubricoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002283365.1", "gtdb_species": "s__Rubrivirga marina", "ani": 77.9243, "matched_fragments": 330, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubrivirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012269805.1", "gtdb_species": "s__Rubrivirga sp012269805", "ani": 77.8913, "matched_fragments": 263, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubrivirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002257665.1", "gtdb_species": "s__Rubricoccus marinus", "ani": 77.8116, "matched_fragments": 276, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubricoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013003465.1", "gtdb_species": "s__JABDIZ01 sp013003465", "ani": 77.3669, "matched_fragments": 145, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__JABDIZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000422305.1", "gtdb_species": "s__Luteimonas mephitis", "ani": 74.9102, "matched_fragments": 72, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017302215.1", "gtdb_species": "s__Dokdonella sp017302215", "ani": 74.7292, "matched_fragments": 79, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dokdonella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000381765.1", "gtdb_species": "s__Gulosibacter faecalis", "ani": 74.7207, "matched_fragments": 73, "total_fragments": 608, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Gulosibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }