{ "tc_result": [ { "organism_name": "Pseudodesulfovibrio profundus", "strain": "strain=500-1", "accession": "GCA_900217235.1", "taxid": 57320, "species_taxid": 57320, "relation_to_type": "type", "validated": true, "ani": 98.1334, "matched_fragments": 972, "total_fragments": 1048, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudodesulfovibrio cashew", "strain": "strain=SRB007", "accession": "GCA_009762795.1", "taxid": 2678688, "species_taxid": 2678688, "relation_to_type": "type", "validated": true, "ani": 78.6709, "matched_fragments": 344, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio piezophilus", "strain": "strain=type strain: C1TLV30", "accession": "GCA_000341895.1", "taxid": 879567, "species_taxid": 879567, "relation_to_type": "type", "validated": true, "ani": 78.4432, "matched_fragments": 210, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio indicus", "strain": "strain=J2", "accession": "GCA_001563225.1", "taxid": 1716143, "species_taxid": 1716143, "relation_to_type": "type", "validated": true, "ani": 78.3783, "matched_fragments": 274, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio indicus", "strain": "strain=DSM 101483", "accession": "GCA_004365595.1", "taxid": 1716143, "species_taxid": 1716143, "relation_to_type": "type", "validated": true, "ani": 78.2998, "matched_fragments": 277, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio sediminis", "strain": "strain=SF6", "accession": "GCA_020886695.1", "taxid": 2810563, "species_taxid": 2810563, "relation_to_type": "type", "validated": true, "ani": 78.235, "matched_fragments": 283, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio hydrargyri", "strain": "strain=BerOc1", "accession": "GCA_001874525.1", "taxid": 2125990, "species_taxid": 2125990, "relation_to_type": "type", "validated": true, "ani": 78.121, "matched_fragments": 256, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio alkaliphilus", "strain": "strain=F-1", "accession": "GCA_009729555.1", "taxid": 2661613, "species_taxid": 2661613, "relation_to_type": "type", "validated": true, "ani": 77.9149, "matched_fragments": 196, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio aespoeensis", "strain": "strain=Aspo-2", "accession": "GCA_000176915.2", "taxid": 182210, "species_taxid": 182210, "relation_to_type": "type", "validated": true, "ani": 77.8849, "matched_fragments": 252, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodesulfovibrio tunisiensis", "strain": "strain=RB22", "accession": "GCA_022809775.1", "taxid": 463192, "species_taxid": 463192, "relation_to_type": "type", "validated": true, "ani": 77.2476, "matched_fragments": 171, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.46, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_900217235.1", "gtdb_species": "s__Pseudodesulfovibrio profundus", "ani": 98.1334, "matched_fragments": 972, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.02", "min_intra_species_ani": "97.98", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.83", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_012516435.1", "gtdb_species": "s__Pseudodesulfovibrio sp012516435", "ani": 79.1912, "matched_fragments": 359, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009762795.1", "gtdb_species": "s__Pseudodesulfovibrio cashew", "ani": 78.6709, "matched_fragments": 344, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016744135.1", "gtdb_species": "s__Pseudodesulfovibrio sp016744135", "ani": 78.4637, "matched_fragments": 198, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000341895.1", "gtdb_species": "s__Pseudodesulfovibrio piezophilus", "ani": 78.4448, "matched_fragments": 210, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001563225.1", "gtdb_species": "s__Pseudodesulfovibrio indicus", "ani": 78.3783, "matched_fragments": 274, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001874525.1", "gtdb_species": "s__Pseudodesulfovibrio hydrargyri", "ani": 78.121, "matched_fragments": 256, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_010468615.1", "gtdb_species": "s__Pseudodesulfovibrio sp010468615", "ani": 78.0869, "matched_fragments": 193, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009729555.1", "gtdb_species": "s__Pseudodesulfovibrio sp009729555", "ani": 77.9149, "matched_fragments": 196, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017351175.1", "gtdb_species": "s__Pseudodesulfovibrio sp017351175", "ani": 77.898, "matched_fragments": 238, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000176915.2", "gtdb_species": "s__Pseudodesulfovibrio aespoeensis", "ani": 77.8849, "matched_fragments": 252, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.94", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.98", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_015709315.1", "gtdb_species": "s__Pseudodesulfovibrio sp015709315", "ani": 77.8831, "matched_fragments": 251, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008830225.1", "gtdb_species": "s__Pseudodesulfovibrio senegalensis", "ani": 77.2373, "matched_fragments": 152, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_I;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }