{ "tc_result": [ { "organism_name": "Brevundimonas aurantiaca", "strain": "strain=DSM 4731", "accession": "GCA_014199955.1", "taxid": 74316, "species_taxid": 74316, "relation_to_type": "type", "validated": true, "ani": 97.2356, "matched_fragments": 595, "total_fragments": 640, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brevundimonas mediterranea", "strain": "strain=DSM 14878", "accession": "GCA_014196125.1", "taxid": 74329, "species_taxid": 74329, "relation_to_type": "type", "validated": true, "ani": 87.4978, "matched_fragments": 527, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas vesicularis", "strain": "strain=NBRC 12165", "accession": "GCA_001592205.1", "taxid": 41276, "species_taxid": 41276, "relation_to_type": "suspected-type", "validated": true, "ani": 84.9056, "matched_fragments": 504, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas huaxiensis", "strain": "strain=090558", "accession": "GCA_014218725.1", "taxid": 2725493, "species_taxid": 2725493, "relation_to_type": "type", "validated": true, "ani": 84.8918, "matched_fragments": 496, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas albigilva", "strain": "strain=KEME 9005-016", "accession": "GCA_023503965.1", "taxid": 1312364, "species_taxid": 1312364, "relation_to_type": "type", "validated": true, "ani": 84.3842, "matched_fragments": 486, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas nasdae", "strain": "strain=JCM 11415", "accession": "GCA_016654005.1", "taxid": 172043, "species_taxid": 172043, "relation_to_type": "type", "validated": true, "ani": 83.6794, "matched_fragments": 470, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas diminuta", "strain": "strain=ATCC 11568", "accession": "GCA_000204035.1", "taxid": 293, "species_taxid": 293, "relation_to_type": "type", "validated": true, "ani": 81.5286, "matched_fragments": 419, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas diminuta", "strain": "strain=NCTC8545", "accession": "GCA_900445995.1", "taxid": 293, "species_taxid": 293, "relation_to_type": "type", "validated": true, "ani": 81.5089, "matched_fragments": 419, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas guildfordensis", "strain": "strain=Sa3CVA3", "accession": "GCA_014836405.1", "taxid": 2762241, "species_taxid": 2762241, "relation_to_type": "type", "validated": true, "ani": 81.2927, "matched_fragments": 385, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas vitisensis", "strain": "strain=GR-TSA-9", "accession": "GCA_016656965.1", "taxid": 2800818, "species_taxid": 2800818, "relation_to_type": "type", "validated": true, "ani": 80.0541, "matched_fragments": 334, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas lutea", "strain": "strain=NS26", "accession": "GCA_003704105.1", "taxid": 2293980, "species_taxid": 2293980, "relation_to_type": "type", "validated": true, "ani": 79.937, "matched_fragments": 342, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas pishanensis", "strain": "strain=CHPC 1.3453", "accession": "GCA_022750635.1", "taxid": 2896315, "species_taxid": 2896315, "relation_to_type": "type", "validated": true, "ani": 78.2737, "matched_fragments": 229, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium aquaticum", "strain": "strain=KACC 18306", "accession": "GCA_022695515.1", "taxid": 1763816, "species_taxid": 1763816, "relation_to_type": "type", "validated": true, "ani": 77.8446, "matched_fragments": 234, "total_fragments": 640, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 64.58, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014199955.1", "gtdb_species": "s__Brevundimonas aurantiaca", "ani": 97.2356, "matched_fragments": 595, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.57", "min_intra_species_ani": "96.95", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.85", "num_clustered_genomes": 12, "status": "conclusive" }, { "accession": "GCA_001796045.1", "gtdb_species": "s__Brevundimonas sp001796045", "ani": 88.3897, "matched_fragments": 467, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011064825.1", "gtdb_species": "s__Brevundimonas mediterranea_A", "ani": 87.6154, "matched_fragments": 534, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0657, "mean_intra_species_ani": "98.11", "min_intra_species_ani": "97.23", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.83", "num_clustered_genomes": 17, "status": "-" }, { "accession": "GCF_014196125.1", "gtdb_species": "s__Brevundimonas mediterranea", "ani": 87.4978, "matched_fragments": 527, "total_fragments": 640, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017308115.1", "gtdb_species": "s__Brevundimonas sp017308115", "ani": 81.8119, "matched_fragments": 386, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004210735.1", "gtdb_species": "s__Brevundimonas sp004210735", "ani": 81.5032, "matched_fragments": 381, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002430835.1", "gtdb_species": "s__Brevundimonas sp002430835", "ani": 81.4709, "matched_fragments": 371, "total_fragments": 640, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.55", "min_intra_species_ani": "99.55", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" } ] }