{ "tc_result": [ { "organism_name": "Phenylobacterium glaciei", "strain": "strain=20VBR1", "accession": "GCA_016772415.2", "taxid": 2803784, "species_taxid": 2803784, "relation_to_type": "type", "validated": true, "ani": 81.0431, "matched_fragments": 677, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium aquaticum", "strain": "strain=KACC 18306", "accession": "GCA_022695515.1", "taxid": 1763816, "species_taxid": 1763816, "relation_to_type": "type", "validated": true, "ani": 81.0186, "matched_fragments": 676, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium hankyongense", "strain": "strain=HKS-05", "accession": "GCA_003254505.1", "taxid": 1813876, "species_taxid": 1813876, "relation_to_type": "type", "validated": true, "ani": 80.8389, "matched_fragments": 612, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium zucineum", "strain": "strain=HLK1", "accession": "GCA_000017265.1", "taxid": 284016, "species_taxid": 284016, "relation_to_type": "type", "validated": true, "ani": 80.2629, "matched_fragments": 618, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium haematophilum", "strain": "strain=DSM 21793", "accession": "GCA_014196295.1", "taxid": 98513, "species_taxid": 98513, "relation_to_type": "type", "validated": true, "ani": 80.1708, "matched_fragments": 613, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium soli", "strain": "strain=LX32", "accession": "GCA_003254475.1", "taxid": 2170551, "species_taxid": 2170551, "relation_to_type": "type", "validated": true, "ani": 80.144, "matched_fragments": 593, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium parvum", "strain": "strain=HYN0004", "accession": "GCA_003150835.1", "taxid": 2201350, "species_taxid": 2201350, "relation_to_type": "type", "validated": true, "ani": 79.6123, "matched_fragments": 448, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium kunshanense", "strain": "strain=BUT-10", "accession": "GCA_003254525.1", "taxid": 1445034, "species_taxid": 1445034, "relation_to_type": "type", "validated": true, "ani": 79.4246, "matched_fragments": 557, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter rhizosphaerae", "strain": "strain=CGMCC 1.15915", "accession": "GCA_014645055.1", "taxid": 2010972, "species_taxid": 2010972, "relation_to_type": "type", "validated": true, "ani": 79.1987, "matched_fragments": 566, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter hibisci", "strain": "strain=KACC 18849", "accession": "GCA_016135805.1", "taxid": 2035993, "species_taxid": 2035993, "relation_to_type": "type", "validated": true, "ani": 79.1595, "matched_fragments": 581, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter soli", "strain": "strain=Ji-3-8", "accession": "GCA_011045195.1", "taxid": 2708539, "species_taxid": 2708539, "relation_to_type": "type", "validated": true, "ani": 79.0518, "matched_fragments": 588, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter radicis", "strain": "strain=695", "accession": "GCA_003094615.1", "taxid": 2172650, "species_taxid": 2172650, "relation_to_type": "type", "validated": true, "ani": 79.0185, "matched_fragments": 582, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter zeae", "strain": "strain=410", "accession": "GCA_002858925.1", "taxid": 2055137, "species_taxid": 2055137, "relation_to_type": "type", "validated": true, "ani": 78.948, "matched_fragments": 583, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter endophyticus", "strain": "strain=774", "accession": "GCA_003116815.1", "taxid": 2172652, "species_taxid": 2172652, "relation_to_type": "type", "validated": true, "ani": 78.9435, "matched_fragments": 594, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oryzihabitans", "strain": "strain=TER-1", "accession": "GCA_004004555.2", "taxid": 2499852, "species_taxid": 2499852, "relation_to_type": "type", "validated": true, "ani": 76.0435, "matched_fragments": 275, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 75.7776, "matched_fragments": 193, "total_fragments": 1113, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.04, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002363865.1", "gtdb_species": "s__Phenylobacterium sp002363865", "ani": 87.6554, "matched_fragments": 899, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002441055.1", "gtdb_species": "s__Phenylobacterium sp002441055", "ani": 86.0628, "matched_fragments": 650, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013911965.1", "gtdb_species": "s__Phenylobacterium sp013911965", "ani": 84.5458, "matched_fragments": 865, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018001015.1", "gtdb_species": "s__Phenylobacterium sp018001015", "ani": 81.0126, "matched_fragments": 647, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.74", "min_intra_species_ani": "99.70", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003254505.1", "gtdb_species": "s__Phenylobacterium hankyongense", "ani": 80.8912, "matched_fragments": 607, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018240795.1", "gtdb_species": "s__Phenylobacterium sp018240795", "ani": 80.5294, "matched_fragments": 596, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001425305.1", "gtdb_species": "s__Phenylobacterium sp001425305", "ani": 80.3833, "matched_fragments": 636, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000017265.1", "gtdb_species": "s__Phenylobacterium zucineum", "ani": 80.2671, "matched_fragments": 618, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.11", "min_intra_species_ani": "99.11", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_004799515.1", "gtdb_species": "s__Phenylobacterium sp004799515", "ani": 80.2552, "matched_fragments": 577, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003254475.1", "gtdb_species": "s__Phenylobacterium soli", "ani": 80.2019, "matched_fragments": 586, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013822795.1", "gtdb_species": "s__Phenylobacterium sp013822795", "ani": 80.1521, "matched_fragments": 629, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004297125.1", "gtdb_species": "s__Phenylobacterium sp004297125", "ani": 79.8121, "matched_fragments": 617, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000281955.1", "gtdb_species": "s__Caulobacter sp000281955", "ani": 79.657, "matched_fragments": 541, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016124325.1", "gtdb_species": "s__Phenylobacterium sp016124325", "ani": 79.6439, "matched_fragments": 588, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000745545.1", "gtdb_species": "s__Caulobacter henricii_C", "ani": 79.4179, "matched_fragments": 562, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.38", "min_intra_species_ani": "99.38", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001427665.1", "gtdb_species": "s__Caulobacter sp001427665", "ani": 79.2073, "matched_fragments": 602, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003185805.1", "gtdb_species": "s__Caulobacter sp003185805", "ani": 79.1835, "matched_fragments": 518, "total_fragments": 1113, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }