{ "tc_result": [ { "organism_name": "Phenylobacterium aquaticum", "strain": "strain=KACC 18306", "accession": "GCA_022695515.1", "taxid": 1763816, "species_taxid": 1763816, "relation_to_type": "type", "validated": true, "ani": 80.8126, "matched_fragments": 700, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium glaciei", "strain": "strain=20VBR1", "accession": "GCA_016772415.2", "taxid": 2803784, "species_taxid": 2803784, "relation_to_type": "type", "validated": true, "ani": 80.6016, "matched_fragments": 664, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium hankyongense", "strain": "strain=HKS-05", "accession": "GCA_003254505.1", "taxid": 1813876, "species_taxid": 1813876, "relation_to_type": "type", "validated": true, "ani": 80.5734, "matched_fragments": 569, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium zucineum", "strain": "strain=HLK1", "accession": "GCA_000017265.1", "taxid": 284016, "species_taxid": 284016, "relation_to_type": "type", "validated": true, "ani": 79.9049, "matched_fragments": 598, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium soli", "strain": "strain=LX32", "accession": "GCA_003254475.1", "taxid": 2170551, "species_taxid": 2170551, "relation_to_type": "type", "validated": true, "ani": 79.8823, "matched_fragments": 584, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium haematophilum", "strain": "strain=DSM 21793", "accession": "GCA_014196295.1", "taxid": 98513, "species_taxid": 98513, "relation_to_type": "type", "validated": true, "ani": 79.6845, "matched_fragments": 596, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium deserti", "strain": "strain=YIM 73061", "accession": "GCA_003254705.1", "taxid": 1914756, "species_taxid": 1914756, "relation_to_type": "type", "validated": true, "ani": 79.5857, "matched_fragments": 455, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium parvum", "strain": "strain=HYN0004", "accession": "GCA_003150835.1", "taxid": 2201350, "species_taxid": 2201350, "relation_to_type": "type", "validated": true, "ani": 79.4122, "matched_fragments": 448, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium kunshanense", "strain": "strain=BUT-10", "accession": "GCA_003254525.1", "taxid": 1445034, "species_taxid": 1445034, "relation_to_type": "type", "validated": true, "ani": 79.3978, "matched_fragments": 522, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter rhizosphaerae", "strain": "strain=CGMCC 1.15915", "accession": "GCA_014645055.1", "taxid": 2010972, "species_taxid": 2010972, "relation_to_type": "type", "validated": true, "ani": 79.0276, "matched_fragments": 527, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter hibisci", "strain": "strain=KACC 18849", "accession": "GCA_016135805.1", "taxid": 2035993, "species_taxid": 2035993, "relation_to_type": "type", "validated": true, "ani": 78.9502, "matched_fragments": 530, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter flavus", "strain": "strain=RHGG3", "accession": "GCA_003722335.1", "taxid": 1679497, "species_taxid": 1679497, "relation_to_type": "type", "validated": true, "ani": 78.9321, "matched_fragments": 530, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter flavus", "strain": "strain=CGMCC1 15093", "accession": "GCA_002858845.1", "taxid": 1679497, "species_taxid": 1679497, "relation_to_type": "type", "validated": true, "ani": 78.9259, "matched_fragments": 520, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter mirabilis", "strain": "strain=FWC 38", "accession": "GCA_002749615.1", "taxid": 69666, "species_taxid": 69666, "relation_to_type": "type", "validated": true, "ani": 78.8641, "matched_fragments": 493, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas subvibrioides", "strain": "strain=ATCC 15264", "accession": "GCA_000144605.1", "taxid": 74313, "species_taxid": 74313, "relation_to_type": "type", "validated": true, "ani": 78.1108, "matched_fragments": 308, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda salina", "strain": "strain=WD6-1", "accession": "GCA_003122085.1", "taxid": 2135793, "species_taxid": 2135793, "relation_to_type": "type", "validated": true, "ani": 76.9624, "matched_fragments": 168, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 75.9968, "matched_fragments": 168, "total_fragments": 1156, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002363865.1", "gtdb_species": "s__Phenylobacterium sp002363865", "ani": 96.6271, "matched_fragments": 1053, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCA_002441055.1", "gtdb_species": "s__Phenylobacterium sp002441055", "ani": 89.3736, "matched_fragments": 706, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013911965.1", "gtdb_species": "s__Phenylobacterium sp013911965", "ani": 83.8165, "matched_fragments": 867, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.20", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018001015.1", "gtdb_species": "s__Phenylobacterium sp018001015", "ani": 80.6423, "matched_fragments": 686, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.74", "min_intra_species_ani": "99.70", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003254505.1", "gtdb_species": "s__Phenylobacterium hankyongense", "ani": 80.5492, "matched_fragments": 572, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004799515.1", "gtdb_species": "s__Phenylobacterium sp004799515", "ani": 79.9724, "matched_fragments": 562, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001425305.1", "gtdb_species": "s__Phenylobacterium sp001425305", "ani": 79.9041, "matched_fragments": 624, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000017265.1", "gtdb_species": "s__Phenylobacterium zucineum", "ani": 79.8996, "matched_fragments": 598, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.11", "min_intra_species_ani": "99.11", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003254475.1", "gtdb_species": "s__Phenylobacterium soli", "ani": 79.8713, "matched_fragments": 586, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003136395.1", "gtdb_species": "s__Phenylobacterium sp003136395", "ani": 79.5001, "matched_fragments": 494, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017418605.1", "gtdb_species": "s__CAISGS01 sp017418605", "ani": 79.4797, "matched_fragments": 513, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__CAISGS01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018135625.1", "gtdb_species": "s__BOG-935 sp018135625", "ani": 79.1359, "matched_fragments": 489, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__BOG-935", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903930545.1", "gtdb_species": "s__Phenylobacterium sp903930545", "ani": 79.1327, "matched_fragments": 399, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.53", "min_intra_species_ani": "99.48", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000426025.1", "gtdb_species": "s__Caulobacter sp000426025", "ani": 79.1271, "matched_fragments": 529, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016234625.1", "gtdb_species": "s__Caulobacter sp016234625", "ani": 78.6847, "matched_fragments": 454, "total_fragments": 1156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }