{ "tc_result": [ { "organism_name": "Henriciella mobilis", "strain": "strain=M65", "accession": "GCA_003576315.1", "taxid": 2305467, "species_taxid": 2305467, "relation_to_type": "type", "validated": true, "ani": 77.1973, "matched_fragments": 165, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas johnsonii", "strain": "strain=MHS-2", "accession": "GCA_000685275.1", "taxid": 81031, "species_taxid": 81031, "relation_to_type": "type", "validated": true, "ani": 77.1402, "matched_fragments": 197, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella aquimarina", "strain": "strain=LMG 24711", "accession": "GCA_002088975.1", "taxid": 545261, "species_taxid": 545261, "relation_to_type": "type", "validated": true, "ani": 77.1199, "matched_fragments": 224, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas oceanitis", "strain": "strain=SCH89", "accession": "GCA_000685295.1", "taxid": 81033, "species_taxid": 81033, "relation_to_type": "type", "validated": true, "ani": 77.0158, "matched_fragments": 165, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas jannaschiana", "strain": "strain=VP2", "accession": "GCA_000685215.1", "taxid": 86, "species_taxid": 86, "relation_to_type": "type", "validated": true, "ani": 76.9889, "matched_fragments": 165, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas polymorpha", "strain": "strain=PS728", "accession": "GCA_000685315.1", "taxid": 74319, "species_taxid": 74319, "relation_to_type": "type", "validated": true, "ani": 76.9851, "matched_fragments": 159, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella pelagia", "strain": "strain=CGMCC 1.15928", "accession": "GCA_014644035.1", "taxid": 1977912, "species_taxid": 1977912, "relation_to_type": "type", "validated": true, "ani": 76.8684, "matched_fragments": 130, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella pelagia", "strain": "strain=LA220", "accession": "GCA_002088945.1", "taxid": 1977912, "species_taxid": 1977912, "relation_to_type": "type", "validated": true, "ani": 76.8522, "matched_fragments": 129, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=CGMCC 1.12921", "accession": "GCA_014640095.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.8421, "matched_fragments": 73, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_022559625.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.8358, "matched_fragments": 72, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas chukchiensis", "strain": "strain=BH-BN04-4", "accession": "GCA_000682695.1", "taxid": 1280947, "species_taxid": 1280947, "relation_to_type": "type", "validated": true, "ani": 76.7995, "matched_fragments": 184, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyphomonas sediminis", "strain": "strain=WL0036", "accession": "GCA_019679475.1", "taxid": 2866160, "species_taxid": 2866160, "relation_to_type": "type", "validated": true, "ani": 76.7236, "matched_fragments": 142, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella marina", "strain": "strain=DSM 19595", "accession": "GCA_000376805.1", "taxid": 453851, "species_taxid": 453851, "relation_to_type": "type", "validated": true, "ani": 76.6269, "matched_fragments": 136, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella algicola", "strain": "strain=CCUG67844", "accession": "GCA_003576245.1", "taxid": 1608422, "species_taxid": 1608422, "relation_to_type": "type", "validated": true, "ani": 76.5328, "matched_fragments": 140, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Henriciella barbarensis", "strain": "strain=CCUG66934", "accession": "GCA_003576345.1", "taxid": 86342, "species_taxid": 86342, "relation_to_type": "type", "validated": true, "ani": 76.1226, "matched_fragments": 110, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_003258835.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 76.0112, "matched_fragments": 86, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bosea caraganae", "strain": "strain=RCAM 04680", "accession": "GCA_003351345.1", "taxid": 2763117, "species_taxid": 2763117, "relation_to_type": "type", "validated": true, "ani": 76.0065, "matched_fragments": 114, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oricola indica", "strain": "strain=JL-62", "accession": "GCA_019966595.1", "taxid": 2872591, "species_taxid": 2872591, "relation_to_type": "type", "validated": true, "ani": 75.9661, "matched_fragments": 53, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=19-2017", "accession": "GCA_018310375.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 75.9566, "matched_fragments": 66, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=HC19", "accession": "GCA_014595955.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 75.9565, "matched_fragments": 66, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amaricoccus solimangrovi", "strain": "strain=HB172011", "accession": "GCA_006385685.1", "taxid": 2589815, "species_taxid": 2589815, "relation_to_type": "type", "validated": true, "ani": 75.7625, "matched_fragments": 88, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus mangrovi", "strain": "strain=B2012", "accession": "GCA_016411865.1", "taxid": 2796142, "species_taxid": 2796142, "relation_to_type": "type", "validated": true, "ani": 75.5913, "matched_fragments": 74, "total_fragments": 728, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 94.44, "contamination": 0.46, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003576285.1", "gtdb_species": "s__Henriciella sp003576285", "ani": 77.3366, "matched_fragments": 167, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.82", "min_intra_species_ani": "97.80", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002408125.1", "gtdb_species": "s__UBA5336 sp002408125", "ani": 77.2359, "matched_fragments": 205, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__UBA5336", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.87", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_002088975.1", "gtdb_species": "s__Henriciella aquimarina", "ani": 77.1419, "matched_fragments": 222, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000685275.1", "gtdb_species": "s__Hyphomonas johnsonii", "ani": 77.1418, "matched_fragments": 196, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000961795.1", "gtdb_species": "s__Hyphomonas sp000961795", "ani": 77.0014, "matched_fragments": 179, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014763715.1", "gtdb_species": "s__Hyphomonas sp014763715", "ani": 76.999, "matched_fragments": 174, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000685215.1", "gtdb_species": "s__Hyphomonas jannaschiana", "ani": 76.9889, "matched_fragments": 165, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016125515.1", "gtdb_species": "s__Hyphomonas sp016125515", "ani": 76.9522, "matched_fragments": 167, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000682735.1", "gtdb_species": "s__Hyphomonas sp000682735", "ani": 76.927, "matched_fragments": 169, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.43", "min_intra_species_ani": "99.16", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_018830285.1", "gtdb_species": "s__Hyphomonas sp018830285", "ani": 76.9164, "matched_fragments": 185, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013823385.1", "gtdb_species": "s__Hyphomonas sp013823385", "ani": 76.8932, "matched_fragments": 185, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018402285.1", "gtdb_species": "s__Hyphomonas sp018402285", "ani": 76.8683, "matched_fragments": 141, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000682695.1", "gtdb_species": "s__Hyphomonas chukchiensis", "ani": 76.7995, "matched_fragments": 184, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017792385.1", "gtdb_species": "s__Hyphomonas sp017792385", "ani": 76.7088, "matched_fragments": 161, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009909065.1", "gtdb_species": "s__UBA5336 sp009909065", "ani": 76.6862, "matched_fragments": 131, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__UBA5336", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003576245.1", "gtdb_species": "s__Henriciella algicola", "ani": 76.5443, "matched_fragments": 144, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016714495.1", "gtdb_species": "s__UBA7672 sp016714495", "ani": 76.3674, "matched_fragments": 73, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__UBA7672", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001854405.1", "gtdb_species": "s__Henriciella sp001854405", "ani": 75.9227, "matched_fragments": 95, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001767925.1", "gtdb_species": "s__CV81 sp001767925", "ani": 75.7362, "matched_fragments": 60, "total_fragments": 728, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }