{ "tc_result": [ { "organism_name": "Marinicauda algicola", "strain": "strain=RMAR8-3", "accession": "GCA_017161425.1", "taxid": 2029849, "species_taxid": 2029849, "relation_to_type": "type", "validated": true, "ani": 78.2652, "matched_fragments": 370, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda algicola", "strain": "strain=JCM 31718", "accession": "GCA_004793685.1", "taxid": 2029849, "species_taxid": 2029849, "relation_to_type": "type", "validated": true, "ani": 78.2352, "matched_fragments": 377, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda salina", "strain": "strain=WD6-1", "accession": "GCA_003122085.1", "taxid": 2135793, "species_taxid": 2135793, "relation_to_type": "type", "validated": true, "ani": 77.8328, "matched_fragments": 377, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda pacifica", "strain": "strain=P-1 km-3", "accession": "GCA_004793635.1", "taxid": 1133559, "species_taxid": 1133559, "relation_to_type": "type", "validated": true, "ani": 77.8118, "matched_fragments": 322, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda pacifica", "strain": "strain=CGMCC 1.11031", "accession": "GCA_014636415.1", "taxid": 1133559, "species_taxid": 1133559, "relation_to_type": "type", "validated": true, "ani": 77.8026, "matched_fragments": 318, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinicauda pacifica", "strain": "strain=P-1 km-3", "accession": "GCA_009806145.1", "taxid": 1133559, "species_taxid": 1133559, "relation_to_type": "type", "validated": true, "ani": 77.8005, "matched_fragments": 319, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maricaulis alexandrii", "strain": "strain=LZ-16-1", "accession": "GCA_005871165.1", "taxid": 2570354, "species_taxid": 2570354, "relation_to_type": "type", "validated": true, "ani": 77.3778, "matched_fragments": 229, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maricaulis maris", "strain": "strain=DSM 4734", "accession": "GCA_003634045.1", "taxid": 74318, "species_taxid": 74318, "relation_to_type": "type", "validated": true, "ani": 77.1328, "matched_fragments": 213, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium symbioticum", "strain": "strain=SB0023/3", "accession": "GCA_902141845.1", "taxid": 2584084, "species_taxid": 2584084, "relation_to_type": "type", "validated": true, "ani": 76.6692, "matched_fragments": 112, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium glaciei", "strain": "strain=20VBR1", "accession": "GCA_016772415.2", "taxid": 2803784, "species_taxid": 2803784, "relation_to_type": "type", "validated": true, "ani": 76.3888, "matched_fragments": 130, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter aminoxidans", "strain": "strain=ATCC BAA-299", "accession": "GCA_023571765.1", "taxid": 186280, "species_taxid": 186280, "relation_to_type": "type", "validated": true, "ani": 76.2246, "matched_fragments": 121, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oryzihabitans", "strain": "strain=TER-1", "accession": "GCA_004004555.2", "taxid": 2499852, "species_taxid": 2499852, "relation_to_type": "type", "validated": true, "ani": 75.9935, "matched_fragments": 121, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium cajani", "strain": "strain=1010", "accession": "GCA_009759665.1", "taxid": 1928661, "species_taxid": 1928661, "relation_to_type": "type", "validated": true, "ani": 75.8784, "matched_fragments": 121, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovarius crocodyli", "strain": "strain=CCP-6", "accession": "GCA_004005855.1", "taxid": 1979269, "species_taxid": 1979269, "relation_to_type": "type", "validated": true, "ani": 75.7622, "matched_fragments": 108, "total_fragments": 971, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.07, "contamination": 0.46, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000152745.1", "gtdb_species": "s__Oceanicaulis sp000152745", "ani": 98.5955, "matched_fragments": 880, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 7, "status": "conclusive" }, { "accession": "GCF_000420265.1", "gtdb_species": "s__Oceanicaulis alexandrii", "ani": 84.5307, "matched_fragments": 757, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.56", "min_intra_species_ani": "97.05", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.85", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_003046365.1", "gtdb_species": "s__Oceanicaulis sp003046365", "ani": 83.8934, "matched_fragments": 719, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.56", "min_intra_species_ani": "96.56", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008630495.1", "gtdb_species": "s__Oceanicaulis satelles", "ani": 78.8009, "matched_fragments": 408, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001657295.1", "gtdb_species": "s__Oceanicaulis sp001657295", "ani": 78.5231, "matched_fragments": 379, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016124675.1", "gtdb_species": "s__Oceanicaulis sp016124675", "ani": 78.3914, "matched_fragments": 393, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017161425.1", "gtdb_species": "s__Marinicauda algicola", "ani": 78.2797, "matched_fragments": 368, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Marinicauda", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003122085.1", "gtdb_species": "s__WD6-1 sp003122085", "ani": 77.8533, "matched_fragments": 376, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__WD6-1", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004793635.1", "gtdb_species": "s__Marinicauda pacifica", "ani": 77.8011, "matched_fragments": 323, "total_fragments": 971, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Marinicauda", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" } ] }