{ "tc_result": [ { "organism_name": "Marinicaulis flavus", "strain": "strain=SY-3-19", "accession": "GCA_002943565.1", "taxid": 2058213, "species_taxid": 2058213, "relation_to_type": "type", "validated": true, "ani": 79.1419, "matched_fragments": 443, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=CGMCC 1.12921", "accession": "GCA_014640095.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.9063, "matched_fragments": 98, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_022559625.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.9021, "matched_fragments": 95, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=CGMCC 1.12710", "accession": "GCA_900199215.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 76.7673, "matched_fragments": 167, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=DSM 105738", "accession": "GCA_014199495.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 76.7403, "matched_fragments": 173, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium aethiopicum", "strain": "strain=HBR26", "accession": "GCA_900094625.1", "taxid": 1138170, "species_taxid": 1138170, "relation_to_type": "type", "validated": true, "ani": 76.2587, "matched_fragments": 51, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium acaciae", "strain": "strain=10BB", "accession": "GCA_020889785.1", "taxid": 2683706, "species_taxid": 2683706, "relation_to_type": "type", "validated": true, "ani": 76.0578, "matched_fragments": 58, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_012848855.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 75.9569, "matched_fragments": 51, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_014640905.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 75.9277, "matched_fragments": 52, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella pollutisoli", "strain": "strain=KCTC 52677", "accession": "GCA_024609765.1", "taxid": 2250594, "species_taxid": 2250594, "relation_to_type": "type", "validated": true, "ani": 75.8808, "matched_fragments": 74, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=GYP-11", "accession": "GCA_009910475.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 75.8765, "matched_fragments": 51, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium intechi", "strain": "strain=BD68", "accession": "GCA_002879535.2", "taxid": 537601, "species_taxid": 537601, "relation_to_type": "type", "validated": true, "ani": 75.8, "matched_fragments": 57, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alsobacter metallidurans", "strain": "strain=CGMCC 1.12214", "accession": "GCA_014636935.1", "taxid": 340221, "species_taxid": 340221, "relation_to_type": "type", "validated": true, "ani": 75.7751, "matched_fragments": 52, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium oropedii", "strain": "strain=Pear76", "accession": "GCA_020889685.1", "taxid": 1571201, "species_taxid": 1571201, "relation_to_type": "type", "validated": true, "ani": 75.756, "matched_fragments": 75, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium daqingense", "strain": "strain=CCBAU 15774", "accession": "GCA_021044685.1", "taxid": 993502, "species_taxid": 993502, "relation_to_type": "type", "validated": true, "ani": 75.6562, "matched_fragments": 55, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas oryzicola", "strain": "strain=KCTC 22478", "accession": "GCA_012163135.1", "taxid": 535904, "species_taxid": 535904, "relation_to_type": "type", "validated": true, "ani": 75.4172, "matched_fragments": 56, "total_fragments": 1000, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002943565.1", "gtdb_species": "s__Marinicaulis flavus", "ani": 79.1424, "matched_fragments": 443, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002704915.1", "gtdb_species": "s__Marinicaulis sp002704915", "ani": 79.0779, "matched_fragments": 443, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002388885.1", "gtdb_species": "s__Marinicaulis sp002388885", "ani": 78.1226, "matched_fragments": 295, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001657385.1", "gtdb_species": "s__Marinicaulis sp001657385", "ani": 77.2142, "matched_fragments": 227, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016125425.1", "gtdb_species": "s__Amphiplicatus sp016125425", "ani": 77.0823, "matched_fragments": 136, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000733125.1", "gtdb_species": "s__Parvularcula oceani", "ani": 76.886, "matched_fragments": 71, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001767925.1", "gtdb_species": "s__CV81 sp001767925", "ani": 76.8451, "matched_fragments": 164, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902826095.1", "gtdb_species": "s__CV81 sp902826095", "ani": 76.7604, "matched_fragments": 159, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900199215.1", "gtdb_species": "s__Amphiplicatus metriothermophilus", "ani": 76.7534, "matched_fragments": 168, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_013002535.1", "gtdb_species": "s__Marinicaulis sp013002535", "ani": 76.6919, "matched_fragments": 133, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.52", "min_intra_species_ani": "99.49", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.96", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_013151255.1", "gtdb_species": "s__Marinicaulis sp013151255", "ani": 76.5063, "matched_fragments": 189, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013151435.1", "gtdb_species": "s__Marinicaulis sp013151435", "ani": 76.2874, "matched_fragments": 97, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.18", "min_intra_species_ani": "97.18", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_012848855.1", "gtdb_species": "s__Pyruvatibacter mobilis", "ani": 75.9569, "matched_fragments": 51, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__CGMCC-115125;g__Pyruvatibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000516555.1", "gtdb_species": "s__P52-10 sp000516555", "ani": 75.9502, "matched_fragments": 54, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__P52-10", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009792355.1", "gtdb_species": "s__Terricaulis silvestris", "ani": 75.9344, "matched_fragments": 54, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014645695.1", "gtdb_species": "s__Salinarimonas ramus", "ani": 75.5176, "matched_fragments": 52, "total_fragments": 1000, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }