{ "tc_result": [ { "organism_name": "Parvularcula dongshanensis", "strain": "strain=DSM 102850", "accession": "GCA_014199615.1", "taxid": 1173995, "species_taxid": 1173995, "relation_to_type": "type", "validated": true, "ani": 78.6406, "matched_fragments": 391, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula oceani", "strain": "strain=JLT2013", "accession": "GCA_000733125.1", "taxid": 1247963, "species_taxid": 1247963, "relation_to_type": "type", "validated": true, "ani": 78.0345, "matched_fragments": 355, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula mediterranea", "strain": "strain=ZS-1/3", "accession": "GCA_013085255.1", "taxid": 2732508, "species_taxid": 2732508, "relation_to_type": "type", "validated": true, "ani": 76.5117, "matched_fragments": 137, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvularcula lutaonensis", "strain": "strain=KCTC 22245", "accession": "GCA_014651915.1", "taxid": 491923, "species_taxid": 491923, "relation_to_type": "type", "validated": true, "ani": 76.4165, "matched_fragments": 130, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_022559625.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.3044, "matched_fragments": 87, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=D11M-2", "accession": "GCA_014534785.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.2764, "matched_fragments": 91, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalinus flavus", "strain": "strain=CGMCC 1.12921", "accession": "GCA_014640095.1", "taxid": 1526572, "species_taxid": 1526572, "relation_to_type": "type", "validated": true, "ani": 76.249, "matched_fragments": 90, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=DSM 105738", "accession": "GCA_014199495.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 75.7223, "matched_fragments": 139, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caulobacter flavus", "strain": "strain=CGMCC1 15093", "accession": "GCA_002858845.1", "taxid": 1679497, "species_taxid": 1679497, "relation_to_type": "type", "validated": true, "ani": 75.6991, "matched_fragments": 155, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amphiplicatus metriothermophilus", "strain": "strain=CGMCC 1.12710", "accession": "GCA_900199215.1", "taxid": 1519374, "species_taxid": 1519374, "relation_to_type": "type", "validated": true, "ani": 75.6783, "matched_fragments": 142, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium aquaticum", "strain": "strain=KACC 18306", "accession": "GCA_022695515.1", "taxid": 1763816, "species_taxid": 1763816, "relation_to_type": "type", "validated": true, "ani": 75.6514, "matched_fragments": 128, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium hispanicum", "strain": "strain=DSM 16372", "accession": "GCA_022179285.1", "taxid": 270350, "species_taxid": 270350, "relation_to_type": "type", "validated": true, "ani": 75.5469, "matched_fragments": 176, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylorubrum suomiense", "strain": "strain=DSM 14458", "accession": "GCA_022179765.1", "taxid": 144191, "species_taxid": 144191, "relation_to_type": "type", "validated": true, "ani": 75.4903, "matched_fragments": 118, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigidibacter albus", "strain": "strain=CGMCC 1.13995", "accession": "GCA_014640395.1", "taxid": 1465486, "species_taxid": 1465486, "relation_to_type": "type", "validated": true, "ani": 75.1582, "matched_fragments": 94, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigidibacter albus", "strain": "strain=SP32", "accession": "GCA_009881095.1", "taxid": 1465486, "species_taxid": 1465486, "relation_to_type": "type", "validated": true, "ani": 75.1153, "matched_fragments": 92, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigidibacter albus", "strain": "strain=SP32", "accession": "GCA_009908165.1", "taxid": 1465486, "species_taxid": 1465486, "relation_to_type": "type", "validated": true, "ani": 75.109, "matched_fragments": 92, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frigidibacter albus", "strain": "strain=SP32", "accession": "GCA_010993795.1", "taxid": 1465486, "species_taxid": 1465486, "relation_to_type": "type", "validated": true, "ani": 75.1069, "matched_fragments": 93, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas haemaphysalidis", "strain": "strain=546", "accession": "GCA_017355405.1", "taxid": 2768162, "species_taxid": 2768162, "relation_to_type": "type", "validated": true, "ani": 75.0277, "matched_fragments": 127, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 74.9746, "matched_fragments": 132, "total_fragments": 858, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 73.19, "contamination": 12.5, "strain_heterogeneity": 33.33 }, "gtdb_result": [ { "accession": "GCF_014199615.1", "gtdb_species": "s__Parvularcula dongshanensis", "ani": 78.6306, "matched_fragments": 391, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000733125.1", "gtdb_species": "s__Parvularcula oceani", "ani": 78.0897, "matched_fragments": 353, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013085255.1", "gtdb_species": "s__Parvularcula mediterranea", "ani": 76.4962, "matched_fragments": 138, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014651915.1", "gtdb_species": "s__Parvularcula lutaonensis", "ani": 76.4165, "matched_fragments": 130, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014640095.1", "gtdb_species": "s__Aquisalinus flavus", "ani": 76.249, "matched_fragments": 90, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Aquisalinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017307205.1", "gtdb_species": "s__Caulobacter sp001896875", "ani": 76.1261, "matched_fragments": 72, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.25", "min_intra_species_ani": "99.25", "mean_intra_species_af": "0.75", "min_intra_species_af": "0.75", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003399445.1", "gtdb_species": "s__Parvularcula sp003399445", "ani": 75.9933, "matched_fragments": 62, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003722335.1", "gtdb_species": "s__Caulobacter flavus", "ani": 75.7378, "matched_fragments": 151, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900199215.1", "gtdb_species": "s__Amphiplicatus metriothermophilus", "ani": 75.6651, "matched_fragments": 143, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001657385.1", "gtdb_species": "s__Marinicaulis sp001657385", "ani": 75.6622, "matched_fragments": 154, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Marinicaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004004555.2", "gtdb_species": "s__Methylobacterium sp004004555", "ani": 75.616, "matched_fragments": 187, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000442255.1", "gtdb_species": "s__Salipiger mucosus", "ani": 75.5654, "matched_fragments": 127, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899075.1", "gtdb_species": "s__Devosia_A sp001899075", "ani": 75.4949, "matched_fragments": 98, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001314805.1", "gtdb_species": "s__Roseicyclus sp001314805", "ani": 75.4789, "matched_fragments": 74, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicyclus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017745235.1", "gtdb_species": "s__Caulobacter sp017745235", "ani": 75.4749, "matched_fragments": 125, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900177295.1", "gtdb_species": "s__Tistlia consotensis", "ani": 75.4164, "matched_fragments": 192, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__DSM-21159;g__Tistlia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001720135.1", "gtdb_species": "s__Methylobrevis pamukkalensis", "ani": 75.3685, "matched_fragments": 132, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Methylobrevis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011046725.1", "gtdb_species": "s__DSPG01 sp011046725", "ani": 75.3063, "matched_fragments": 144, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__DSPG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003506635.1", "gtdb_species": "s__CV81 sp003506635", "ani": 75.2026, "matched_fragments": 75, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__CV81", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009908165.1", "gtdb_species": "s__Frigidibacter albus", "ani": 75.109, "matched_fragments": 92, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Frigidibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.99", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_016106005.1", "gtdb_species": "s__Roseomonas_B sp016106005", "ani": 74.9939, "matched_fragments": 141, "total_fragments": 858, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }