{ "tc_result": [ { "organism_name": "Parvibaculum indicum", "strain": "strain=DSM 25305", "accession": "GCA_011762095.1", "taxid": 562969, "species_taxid": 562969, "relation_to_type": "type", "validated": true, "ani": 90.4864, "matched_fragments": 892, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvibaculum lavamentivorans", "strain": "strain=DS-1", "accession": "GCA_000017565.1", "taxid": 256618, "species_taxid": 256618, "relation_to_type": "type", "validated": true, "ani": 78.9095, "matched_fragments": 451, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parvibaculum sedimenti", "strain": "strain=HXT-9", "accession": "GCA_009184905.1", "taxid": 2608632, "species_taxid": 2608632, "relation_to_type": "type", "validated": true, "ani": 78.479, "matched_fragments": 395, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tepidicaulis marinus", "strain": "strain=MA2", "accession": "GCA_000739695.1", "taxid": 1333998, "species_taxid": 1333998, "relation_to_type": "type", "validated": true, "ani": 77.6421, "matched_fragments": 315, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_012848855.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 77.2507, "matched_fragments": 215, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=GYP-11", "accession": "GCA_009910475.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 77.2484, "matched_fragments": 213, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_014640905.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 77.2055, "matched_fragments": 220, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sophorae", "strain": "strain=ICMP 19535", "accession": "GCA_002270415.1", "taxid": 1300294, "species_taxid": 1300294, "relation_to_type": "type", "validated": true, "ani": 76.8412, "matched_fragments": 116, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia adipata", "strain": "strain=DSM 17808", "accession": "GCA_000423225.1", "taxid": 166954, "species_taxid": 166954, "relation_to_type": "type", "validated": true, "ani": 76.7188, "matched_fragments": 145, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrobacterium leguminum", "strain": "strain=MOPV5", "accession": "GCA_015704895.1", "taxid": 2792015, "species_taxid": 2792015, "relation_to_type": "type", "validated": true, "ani": 76.7101, "matched_fragments": 110, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus trichosporium", "strain": "strain=OB3b", "accession": "GCA_000178815.2", "taxid": 426, "species_taxid": 426, "relation_to_type": "type", "validated": true, "ani": 76.6657, "matched_fragments": 111, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus trichosporium", "strain": "strain=OB3b", "accession": "GCA_002752655.1", "taxid": 426, "species_taxid": 426, "relation_to_type": "type", "validated": true, "ani": 76.645, "matched_fragments": 114, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter aminoxidans", "strain": "strain=ATCC BAA-299", "accession": "GCA_023571765.1", "taxid": 186280, "species_taxid": 186280, "relation_to_type": "type", "validated": true, "ani": 76.6432, "matched_fragments": 135, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium opportunistum", "strain": "strain=WSM2075", "accession": "GCA_000176035.2", "taxid": 593909, "species_taxid": 593909, "relation_to_type": "type", "validated": true, "ani": 76.6321, "matched_fragments": 123, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga splendida", "strain": "strain=BT325", "accession": "GCA_016427565.1", "taxid": 2795727, "species_taxid": 2795727, "relation_to_type": "type", "validated": true, "ani": 76.4979, "matched_fragments": 98, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter agilis", "strain": "strain=LMG 16336", "accession": "GCA_021730435.1", "taxid": 47492, "species_taxid": 47492, "relation_to_type": "type", "validated": true, "ani": 76.4817, "matched_fragments": 123, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris viridis", "strain": "strain=DSM 133", "accession": "GCA_001548155.2", "taxid": 1079, "species_taxid": 1079, "relation_to_type": "type", "validated": true, "ani": 76.4813, "matched_fragments": 104, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris viridis", "strain": "strain=ATCC 19567", "accession": "GCA_001402875.1", "taxid": 1079, "species_taxid": 1079, "relation_to_type": "type", "validated": true, "ani": 76.4619, "matched_fragments": 105, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium onobrychidis", "strain": "strain=OM4", "accession": "GCA_024707545.1", "taxid": 2775404, "species_taxid": 2775404, "relation_to_type": "type", "validated": true, "ani": 76.3956, "matched_fragments": 106, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiella endophytica", "strain": "strain=CBS5Q-3", "accession": "GCA_004519335.1", "taxid": 2558362, "species_taxid": 2558362, "relation_to_type": "type", "validated": true, "ani": 76.3069, "matched_fragments": 124, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoligotrophos defluvii", "strain": "strain=lm1", "accession": "GCA_005281615.1", "taxid": 2561934, "species_taxid": 2561934, "relation_to_type": "type", "validated": true, "ani": 76.2048, "matched_fragments": 103, "total_fragments": 1006, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 79.17, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002684405.1", "gtdb_species": "s__Parvibaculum sp002684405", "ani": 99.9419, "matched_fragments": 929, "total_fragments": 1006, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_011762095.1", "gtdb_species": "s__Parvibaculum indicum", "ani": 90.4864, "matched_fragments": 892, "total_fragments": 1006, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002480495.1", "gtdb_species": "s__Parvibaculum sp002480495", "ani": 79.1576, "matched_fragments": 459, "total_fragments": 1006, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_014359855.1", "gtdb_species": "s__Parvibaculum sp014359855", "ani": 78.7607, "matched_fragments": 272, "total_fragments": 1006, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002841195.1", "gtdb_species": "s__Parvibaculum sp002841195", "ani": 78.6616, "matched_fragments": 390, "total_fragments": 1006, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aureimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004519335.1", "gtdb_species": "s__Jiella endophytica", "ani": 76.3069, "matched_fragments": 124, "total_fragments": 1006, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Jiella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }