{ "tc_result": [ { "organism_name": "Microbacterium ureisolvens", "strain": "strain=CFH S00084", "accession": "GCA_015278315.1", "taxid": 2781186, "species_taxid": 2781186, "relation_to_type": "type", "validated": true, "ani": 79.3479, "matched_fragments": 376, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium trichothecenolyticum", "strain": "strain=DSM 8608", "accession": "GCA_000956465.1", "taxid": 69370, "species_taxid": 69370, "relation_to_type": "type", "validated": true, "ani": 79.2611, "matched_fragments": 387, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium sulfonylureivorans", "strain": "strain=LAM7116", "accession": "GCA_003999995.1", "taxid": 2486854, "species_taxid": 2486854, "relation_to_type": "type", "validated": true, "ani": 79.214, "matched_fragments": 360, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium thalassium", "strain": "strain=DSM 12511", "accession": "GCA_014208045.1", "taxid": 362649, "species_taxid": 362649, "relation_to_type": "type", "validated": true, "ani": 79.1953, "matched_fragments": 361, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium kyungheense", "strain": "strain=DSM 105492", "accession": "GCA_006783905.1", "taxid": 1263636, "species_taxid": 1263636, "relation_to_type": "type", "validated": true, "ani": 79.186, "matched_fragments": 357, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium yannicii", "strain": "strain=DSM 23203", "accession": "GCA_024055635.1", "taxid": 671622, "species_taxid": 671622, "relation_to_type": "type", "validated": true, "ani": 79.1718, "matched_fragments": 389, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium flavescens", "strain": "strain=JCM 3877", "accession": "GCA_018588945.1", "taxid": 69366, "species_taxid": 69366, "relation_to_type": "type", "validated": true, "ani": 79.1372, "matched_fragments": 372, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium cremeum", "strain": "strain=NY27", "accession": "GCA_015277855.1", "taxid": 2782169, "species_taxid": 2782169, "relation_to_type": "type", "validated": true, "ani": 79.1341, "matched_fragments": 387, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 79.0717, "matched_fragments": 386, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=JCM 17023", "accession": "GCA_015278285.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 78.9008, "matched_fragments": 322, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=DSM 19600", "accession": "GCA_023155715.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 78.8942, "matched_fragments": 323, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium wangchenii", "strain": "strain=dk512", "accession": "GCA_004564355.1", "taxid": 2541726, "species_taxid": 2541726, "relation_to_type": "type", "validated": true, "ani": 78.8747, "matched_fragments": 345, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium rhizomatis", "strain": "strain=JCM 30598", "accession": "GCA_008710745.1", "taxid": 1631477, "species_taxid": 1631477, "relation_to_type": "type", "validated": true, "ani": 78.8232, "matched_fragments": 358, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=NBRC 108778", "accession": "GCA_007992455.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 78.8218, "matched_fragments": 337, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=K-1", "accession": "GCA_008017435.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 78.8004, "matched_fragments": 336, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium lushaniae", "strain": "strain=L-031", "accession": "GCA_008727775.1", "taxid": 2614639, "species_taxid": 2614639, "relation_to_type": "type", "validated": true, "ani": 78.7615, "matched_fragments": 338, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 78.41, "matched_fragments": 287, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oxydans", "strain": "strain=NBRC 15586", "accession": "GCA_006540085.1", "taxid": 82380, "species_taxid": 82380, "relation_to_type": "suspected-type", "validated": true, "ani": 78.3837, "matched_fragments": 277, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oxydans", "strain": "strain=DSM 20578", "accession": "GCA_008868025.1", "taxid": 82380, "species_taxid": 82380, "relation_to_type": "suspected-type", "validated": true, "ani": 78.3695, "matched_fragments": 282, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium caowuchunii", "strain": "strain=ST-M6", "accession": "GCA_008727755.1", "taxid": 2614638, "species_taxid": 2614638, "relation_to_type": "type", "validated": true, "ani": 78.3425, "matched_fragments": 313, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium mangrovi", "strain": "strain=MUSC 115", "accession": "GCA_000802305.1", "taxid": 1348253, "species_taxid": 1348253, "relation_to_type": "type", "validated": true, "ani": 78.337, "matched_fragments": 302, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=DSM 15019", "accession": "GCA_900105335.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 78.2851, "matched_fragments": 289, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=NBRC 103076", "accession": "GCA_001552495.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 78.2084, "matched_fragments": 262, "total_fragments": 886, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 75.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002812805.1", "gtdb_species": "s__Microbacterium lacus", "ani": 97.3072, "matched_fragments": 719, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.80", "min_intra_species_ani": "97.80", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_002812725.1", "gtdb_species": "s__Microbacterium sp002812725", "ani": 85.6799, "matched_fragments": 640, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.24", "min_intra_species_ani": "99.24", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003476465.1", "gtdb_species": "s__Microbacterium sp003476465", "ani": 81.8738, "matched_fragments": 245, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003248605.1", "gtdb_species": "s__Microbacterium sp003248605", "ani": 80.2138, "matched_fragments": 396, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001427525.1", "gtdb_species": "s__Microbacterium sp001427525", "ani": 79.3991, "matched_fragments": 373, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017831975.1", "gtdb_species": "s__Microbacterium terrae", "ani": 79.3066, "matched_fragments": 361, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013409785.1", "gtdb_species": "s__Microbacterium immunditiarum", "ani": 79.2618, "matched_fragments": 365, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012524205.1", "gtdb_species": "s__Microbacterium sp012524205", "ani": 79.1732, "matched_fragments": 358, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007992455.1", "gtdb_species": "s__Microbacterium saccharophilum", "ani": 78.8281, "matched_fragments": 336, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.54", "min_intra_species_ani": "98.03", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000967865.1", "gtdb_species": "s__Microbacterium sp000967865", "ani": 78.574, "matched_fragments": 301, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105335.1", "gtdb_species": "s__Microbacterium paraoxydans", "ani": 78.293, "matched_fragments": 289, "total_fragments": 886, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.3631, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "98.76", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" } ] }