{ "tc_result": [ { "organism_name": "Microbacterium profundi", "strain": "strain=Shh49", "accession": "GCA_000763375.1", "taxid": 450380, "species_taxid": 450380, "relation_to_type": "type", "validated": true, "ani": 98.3721, "matched_fragments": 589, "total_fragments": 670, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium murale", "strain": "strain=CCM 7640", "accession": "GCA_014635185.1", "taxid": 1081040, "species_taxid": 1081040, "relation_to_type": "type", "validated": true, "ani": 90.7708, "matched_fragments": 534, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aerolatum", "strain": "strain=NBRC 103071", "accession": "GCA_007988825.1", "taxid": 153731, "species_taxid": 153731, "relation_to_type": "type", "validated": true, "ani": 82.9112, "matched_fragments": 460, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aerolatum", "strain": "strain=CCM 4955", "accession": "GCA_014635005.1", "taxid": 153731, "species_taxid": 153731, "relation_to_type": "type", "validated": true, "ani": 82.848, "matched_fragments": 473, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=JCM 15516", "accession": "GCA_015278215.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 81.4287, "matched_fragments": 404, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=DSM 24823", "accession": "GCA_014205075.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 81.3836, "matched_fragments": 410, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium liquefaciens", "strain": "strain=JCM 3879", "accession": "GCA_014648755.1", "taxid": 33918, "species_taxid": 33918, "relation_to_type": "type", "validated": true, "ani": 80.8223, "matched_fragments": 357, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium liquefaciens", "strain": "strain=NBRC 15037", "accession": "GCA_006539765.1", "taxid": 33918, "species_taxid": 33918, "relation_to_type": "type", "validated": true, "ani": 80.7572, "matched_fragments": 360, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saperdae", "strain": "strain=JCM 1352", "accession": "GCA_014646775.1", "taxid": 69368, "species_taxid": 69368, "relation_to_type": "type", "validated": true, "ani": 80.4842, "matched_fragments": 382, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 80.4636, "matched_fragments": 334, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 78.7673, "matched_fragments": 274, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 78.6972, "matched_fragments": 240, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium atlanticum", "strain": "strain=WY121", "accession": "GCA_015277815.1", "taxid": 2782168, "species_taxid": 2782168, "relation_to_type": "type", "validated": true, "ani": 78.6292, "matched_fragments": 265, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium yannicii", "strain": "strain=DSM 23203", "accession": "GCA_024055635.1", "taxid": 671622, "species_taxid": 671622, "relation_to_type": "type", "validated": true, "ani": 78.3401, "matched_fragments": 274, "total_fragments": 670, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 45.83, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_000763375.1", "gtdb_species": "s__Microbacterium profundi", "ani": 98.3483, "matched_fragments": 589, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.00", "min_intra_species_ani": "98.00", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_014635185.1", "gtdb_species": "s__Microbacterium murale", "ani": 90.7602, "matched_fragments": 534, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007988825.1", "gtdb_species": "s__Microbacterium aerolatum", "ani": 82.9289, "matched_fragments": 459, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_015277895.1", "gtdb_species": "s__Microbacterium sp015277895", "ani": 82.4981, "matched_fragments": 447, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_903645325.1", "gtdb_species": "s__Microbacterium sp903645325", "ani": 82.4346, "matched_fragments": 394, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205075.1", "gtdb_species": "s__Microbacterium ginsengiterrae", "ani": 81.3668, "matched_fragments": 411, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.43", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000685355.1", "gtdb_species": "s__Microbacterium sp000685355", "ani": 80.9224, "matched_fragments": 401, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008868125.1", "gtdb_species": "s__Microbacterium maritypicum", "ani": 80.7651, "matched_fragments": 373, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.89", "min_intra_species_ani": "96.90", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.86", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002872075.1", "gtdb_species": "s__Microbacterium kitamiense", "ani": 80.7316, "matched_fragments": 367, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000956525.1", "gtdb_species": "s__Microbacterium oxydans_A", "ani": 80.6957, "matched_fragments": 388, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002979655.1", "gtdb_species": "s__Microbacterium sp002979655", "ani": 80.6047, "matched_fragments": 370, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.69", "min_intra_species_ani": "97.67", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_006716345.1", "gtdb_species": "s__Microbacterium saperdae", "ani": 80.5399, "matched_fragments": 377, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017744855.1", "gtdb_species": "s__Microbacterium sp017744855", "ani": 80.2285, "matched_fragments": 297, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007954505.1", "gtdb_species": "s__Microbacterium sp000800925", "ani": 80.0556, "matched_fragments": 381, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.26", "min_intra_species_ani": "97.84", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_003524435.1", "gtdb_species": "s__Microbacterium sp003524435", "ani": 79.5156, "matched_fragments": 297, "total_fragments": 670, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }