{ "tc_result": [ { "organism_name": "Microbacterium thalassium", "strain": "strain=DSM 12511", "accession": "GCA_014208045.1", "taxid": 362649, "species_taxid": 362649, "relation_to_type": "type", "validated": true, "ani": 79.9092, "matched_fragments": 450, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium telephonicum", "strain": "strain=S2T63", "accession": "GCA_003651225.1", "taxid": 1714841, "species_taxid": 1714841, "relation_to_type": "type", "validated": true, "ani": 79.8419, "matched_fragments": 400, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hominis", "strain": "strain=NBRC 15708", "accession": "GCA_001592125.1", "taxid": 162426, "species_taxid": 162426, "relation_to_type": "type", "validated": true, "ani": 79.7847, "matched_fragments": 391, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium kyungheense", "strain": "strain=DSM 105492", "accession": "GCA_006783905.1", "taxid": 1263636, "species_taxid": 1263636, "relation_to_type": "type", "validated": true, "ani": 79.716, "matched_fragments": 416, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ureisolvens", "strain": "strain=CFH S00084", "accession": "GCA_015278315.1", "taxid": 2781186, "species_taxid": 2781186, "relation_to_type": "type", "validated": true, "ani": 79.7012, "matched_fragments": 424, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium cremeum", "strain": "strain=NY27", "accession": "GCA_015277855.1", "taxid": 2782169, "species_taxid": 2782169, "relation_to_type": "type", "validated": true, "ani": 79.7004, "matched_fragments": 431, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hominis", "strain": "strain=LCDC 84-0209", "accession": "GCA_001553805.1", "taxid": 162426, "species_taxid": 162426, "relation_to_type": "type", "validated": true, "ani": 79.661, "matched_fragments": 401, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=K-1", "accession": "GCA_008017435.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 79.5841, "matched_fragments": 392, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=NBRC 108778", "accession": "GCA_007992455.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 79.5714, "matched_fragments": 401, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium imperiale", "strain": "strain=DSM 20530", "accession": "GCA_017876655.1", "taxid": 33884, "species_taxid": 33884, "relation_to_type": "type", "validated": true, "ani": 79.4969, "matched_fragments": 399, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium timonense", "strain": "strain=Marseille-P5731", "accession": "GCA_900292075.1", "taxid": 2086576, "species_taxid": 2086576, "relation_to_type": "type", "validated": true, "ani": 79.4683, "matched_fragments": 401, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium sulfonylureivorans", "strain": "strain=LAM7116", "accession": "GCA_003999995.1", "taxid": 2486854, "species_taxid": 2486854, "relation_to_type": "type", "validated": true, "ani": 79.4567, "matched_fragments": 419, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium immunditiarum", "strain": "strain=DSM 24662", "accession": "GCA_013409785.1", "taxid": 337480, "species_taxid": 337480, "relation_to_type": "type", "validated": true, "ani": 79.4339, "matched_fragments": 412, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium caowuchunii", "strain": "strain=ST-M6", "accession": "GCA_008727755.1", "taxid": 2614638, "species_taxid": 2614638, "relation_to_type": "type", "validated": true, "ani": 79.4301, "matched_fragments": 348, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 79.4221, "matched_fragments": 429, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium atlanticum", "strain": "strain=WY121", "accession": "GCA_015277815.1", "taxid": 2782168, "species_taxid": 2782168, "relation_to_type": "type", "validated": true, "ani": 79.3629, "matched_fragments": 421, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium trichothecenolyticum", "strain": "strain=DSM 8608", "accession": "GCA_000956465.1", "taxid": 69370, "species_taxid": 69370, "relation_to_type": "type", "validated": true, "ani": 79.351, "matched_fragments": 431, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium flavescens", "strain": "strain=JCM 3877", "accession": "GCA_018588945.1", "taxid": 69366, "species_taxid": 69366, "relation_to_type": "type", "validated": true, "ani": 79.3067, "matched_fragments": 407, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium enclense", "strain": "strain=NIO-1002", "accession": "GCA_001456955.1", "taxid": 993073, "species_taxid": 993073, "relation_to_type": "type", "validated": true, "ani": 79.286, "matched_fragments": 383, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hatanonis", "strain": "strain=JCM14558", "accession": "GCA_008017415.1", "taxid": 404366, "species_taxid": 404366, "relation_to_type": "type", "validated": true, "ani": 79.2645, "matched_fragments": 361, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=DSM 19600", "accession": "GCA_023155715.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 79.2623, "matched_fragments": 392, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=JCM 17023", "accession": "GCA_015278285.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 79.2548, "matched_fragments": 392, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium yannicii", "strain": "strain=DSM 23203", "accession": "GCA_024055635.1", "taxid": 671622, "species_taxid": 671622, "relation_to_type": "type", "validated": true, "ani": 79.2545, "matched_fragments": 420, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium luticocti", "strain": "strain=DSM 19459", "accession": "GCA_000422405.1", "taxid": 451764, "species_taxid": 451764, "relation_to_type": "type", "validated": true, "ani": 79.2532, "matched_fragments": 359, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium radiodurans", "strain": "strain=DSM 25564", "accession": "GCA_008710705.1", "taxid": 661398, "species_taxid": 661398, "relation_to_type": "type", "validated": true, "ani": 79.2519, "matched_fragments": 374, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium testaceum", "strain": "strain=NBRC 12675", "accession": "GCA_006539145.1", "taxid": 2033, "species_taxid": 2033, "relation_to_type": "suspected-type", "validated": true, "ani": 79.2311, "matched_fragments": 357, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aerolatum", "strain": "strain=NBRC 103071", "accession": "GCA_007988825.1", "taxid": 153731, "species_taxid": 153731, "relation_to_type": "type", "validated": true, "ani": 78.9848, "matched_fragments": 329, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium aerolatum", "strain": "strain=CCM 4955", "accession": "GCA_014635005.1", "taxid": 153731, "species_taxid": 153731, "relation_to_type": "type", "validated": true, "ani": 78.9582, "matched_fragments": 336, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 78.8379, "matched_fragments": 324, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 78.6797, "matched_fragments": 319, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002313585.1", "gtdb_species": "s__Microbacterium sp002313585", "ani": 99.942, "matched_fragments": 1003, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "97.87", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.79", "num_clustered_genomes": 16, "status": "conclusive" }, { "accession": "GCA_001898325.1", "gtdb_species": "s__Microbacterium sp001898325", "ani": 88.7449, "matched_fragments": 786, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015565955.1", "gtdb_species": "s__Microbacterium schleiferi", "ani": 85.9178, "matched_fragments": 792, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001652465.1", "gtdb_species": "s__Microbacterium chocolatum", "ani": 79.8634, "matched_fragments": 395, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.91", "min_intra_species_ani": "96.78", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.81", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_015277855.1", "gtdb_species": "s__Microbacterium sp015277855", "ani": 79.7318, "matched_fragments": 428, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000380605.1", "gtdb_species": "s__Microbacterium sp000380605", "ani": 79.5314, "matched_fragments": 439, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009858275.1", "gtdb_species": "s__Microbacterium sp009858275", "ani": 79.5189, "matched_fragments": 428, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_900078385.1", "gtdb_species": "s__Microbacterium sp900078385", "ani": 79.5129, "matched_fragments": 398, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001427145.1", "gtdb_species": "s__Microbacterium sp001427145", "ani": 79.486, "matched_fragments": 412, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001428485.1", "gtdb_species": "s__Microbacterium sp001428485", "ani": 79.4802, "matched_fragments": 403, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014837165.1", "gtdb_species": "s__Microbacterium sp014837165", "ani": 79.4332, "matched_fragments": 428, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013409785.1", "gtdb_species": "s__Microbacterium immunditiarum", "ani": 79.4213, "matched_fragments": 414, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013410955.1", "gtdb_species": "s__Microbacterium sp013410955", "ani": 79.2792, "matched_fragments": 380, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014197265.1", "gtdb_species": "s__Microbacterium invictum", "ani": 79.2535, "matched_fragments": 387, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000422405.1", "gtdb_species": "s__Microbacterium luticocti", "ani": 79.2266, "matched_fragments": 361, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902706225.1", "gtdb_species": "s__Microbacterium sp902706225", "ani": 79.1307, "matched_fragments": 385, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017306415.1", "gtdb_species": "s__Microbacterium sp001897105", "ani": 78.9743, "matched_fragments": 368, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.03", "min_intra_species_ani": "95.75", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.85", "num_clustered_genomes": 5, "status": "-" } ] }