{ "tc_result": [ { "organism_name": "Nisaea sediminum", "strain": "strain=NBU1469", "accession": "GCA_014904705.1", "taxid": 2775867, "species_taxid": 2775867, "relation_to_type": "type", "validated": true, "ani": 76.9867, "matched_fragments": 74, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum indicum", "strain": "strain=P24", "accession": "GCA_000299935.1", "taxid": 526216, "species_taxid": 526216, "relation_to_type": "type", "validated": true, "ani": 76.8093, "matched_fragments": 76, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=DSM 5900", "accession": "GCA_003751345.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 76.7223, "matched_fragments": 56, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=ATCC 43930", "accession": "GCA_006738645.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 76.6808, "matched_fragments": 57, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum nanhaiense", "strain": "strain=L54-1-50", "accession": "GCA_002148795.1", "taxid": 1909734, "species_taxid": 1909734, "relation_to_type": "type", "validated": true, "ani": 76.6667, "matched_fragments": 57, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium qingshengii", "strain": "strain=CGMCC 1.12097", "accession": "GCA_900103325.1", "taxid": 1165689, "species_taxid": 1165689, "relation_to_type": "type", "validated": true, "ani": 76.5929, "matched_fragments": 55, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobaculum fulvum", "strain": "strain=KCTC 42651", "accession": "GCA_014652915.1", "taxid": 1633335, "species_taxid": 1633335, "relation_to_type": "type", "validated": true, "ani": 76.5882, "matched_fragments": 92, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium australicum", "strain": "strain=WSM2073", "accession": "GCA_000230995.3", "taxid": 536018, "species_taxid": 536018, "relation_to_type": "type", "validated": true, "ani": 76.5621, "matched_fragments": 56, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oricola indica", "strain": "strain=JL-62", "accession": "GCA_019966595.1", "taxid": 2872591, "species_taxid": 2872591, "relation_to_type": "type", "validated": true, "ani": 76.5393, "matched_fragments": 52, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea nitritireducens", "strain": "strain=DSM 19540", "accession": "GCA_014904795.1", "taxid": 568392, "species_taxid": 568392, "relation_to_type": "type", "validated": true, "ani": 76.5312, "matched_fragments": 58, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 76.4856, "matched_fragments": 88, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inquilinus limosus", "strain": "strain=DSM 16000", "accession": "GCA_000423185.1", "taxid": 171674, "species_taxid": 171674, "relation_to_type": "type", "validated": true, "ani": 76.4754, "matched_fragments": 82, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marivibrio halodurans", "strain": "strain=CGMCC 1.15697", "accession": "GCA_017963645.1", "taxid": 2039722, "species_taxid": 2039722, "relation_to_type": "type", "validated": true, "ani": 76.4031, "matched_fragments": 58, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum pacificum", "strain": "strain=MCCC 1A02656", "accession": "GCA_001618175.1", "taxid": 580166, "species_taxid": 580166, "relation_to_type": "type", "validated": true, "ani": 76.3668, "matched_fragments": 63, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum brasilense", "strain": "strain=Sp 7", "accession": "GCA_002027385.1", "taxid": 192, "species_taxid": 192, "relation_to_type": "type", "validated": true, "ani": 76.2997, "matched_fragments": 58, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum brasilense", "strain": "strain=Sp 7", "accession": "GCA_007827425.1", "taxid": 192, "species_taxid": 192, "relation_to_type": "type", "validated": true, "ani": 76.2711, "matched_fragments": 59, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum brasilense", "strain": "strain=Sp 7", "accession": "GCA_008274945.1", "taxid": 192, "species_taxid": 192, "relation_to_type": "type", "validated": true, "ani": 76.2698, "matched_fragments": 58, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium comanense", "strain": "strain=3P27G6", "accession": "GCA_005503535.1", "taxid": 2502215, "species_taxid": 2502215, "relation_to_type": "type", "validated": true, "ani": 76.2618, "matched_fragments": 51, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sinorhizobium meliloti", "strain": "strain=USDA1002", "accession": "GCA_009601385.1", "taxid": 382, "species_taxid": 382, "relation_to_type": "type", "validated": true, "ani": 76.0851, "matched_fragments": 53, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium metallidurans", "strain": "strain=STM 2683", "accession": "GCA_000350085.1", "taxid": 489722, "species_taxid": 489722, "relation_to_type": "type", "validated": true, "ani": 76.0662, "matched_fragments": 53, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum palustre", "strain": "strain=B2", "accession": "GCA_002573965.1", "taxid": 2044885, "species_taxid": 2044885, "relation_to_type": "type", "validated": true, "ani": 76.0427, "matched_fragments": 63, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum soli", "strain": "strain=CC-LY788", "accession": "GCA_017876165.1", "taxid": 1304799, "species_taxid": 1304799, "relation_to_type": "type", "validated": true, "ani": 75.9863, "matched_fragments": 57, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sinorhizobium meliloti", "strain": "strain=NBRC 14782", "accession": "GCA_006539625.1", "taxid": 382, "species_taxid": 382, "relation_to_type": "type", "validated": true, "ani": 75.89, "matched_fragments": 51, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oryzihabitans", "strain": "strain=TER-1", "accession": "GCA_004004555.2", "taxid": 2499852, "species_taxid": 2499852, "relation_to_type": "type", "validated": true, "ani": 75.8681, "matched_fragments": 62, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sanjuanii", "strain": "strain=BSA136", "accession": "GCA_002529485.1", "taxid": 2037900, "species_taxid": 2037900, "relation_to_type": "type", "validated": true, "ani": 75.6513, "matched_fragments": 63, "total_fragments": 365, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 90.78, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_011522725.1", "gtdb_species": "s__UBA8309 sp001627655", "ani": 98.9155, "matched_fragments": 348, "total_fragments": 365, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Puniceispirillales;f__Puniceispirillaceae;g__UBA8309", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.91", "min_intra_species_ani": "98.58", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 8, "status": "conclusive" }, { "accession": "GCA_002457745.1", "gtdb_species": "s__UBA8309 sp002457745", "ani": 81.4258, "matched_fragments": 211, "total_fragments": 365, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Puniceispirillales;f__Puniceispirillaceae;g__UBA8309", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009920665.1", "gtdb_species": "s__UBA8309 sp009920665", "ani": 80.7951, "matched_fragments": 253, 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017305815.1", "gtdb_species": "s__Kaistia sp017305815", "ani": 75.5845, "matched_fragments": 53, "total_fragments": 365, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Kaistiaceae;g__Kaistia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }