{ "tc_result": [ { "organism_name": "Amorphus coralli", "strain": "strain=DSM 19760", "accession": "GCA_000374525.1", "taxid": 340680, "species_taxid": 340680, "relation_to_type": "type", "validated": true, "ani": 85.6644, "matched_fragments": 1006, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_014197785.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 77.8641, "matched_fragments": 394, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_003258835.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 77.7986, "matched_fragments": 396, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus mangrovi", "strain": "strain=B2012", "accession": "GCA_016411865.1", "taxid": 2796142, "species_taxid": 2796142, "relation_to_type": "type", "validated": true, "ani": 77.6396, "matched_fragments": 419, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobrevis pamukkalensis", "strain": "strain=PK2", "accession": "GCA_001720135.1", "taxid": 1439726, "species_taxid": 1439726, "relation_to_type": "type", "validated": true, "ani": 77.5958, "matched_fragments": 353, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=SM30", "accession": "GCA_011317485.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 77.4947, "matched_fragments": 390, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia adipata", "strain": "strain=DSM 17808", "accession": "GCA_000423225.1", "taxid": 166954, "species_taxid": 166954, "relation_to_type": "type", "validated": true, "ani": 77.3675, "matched_fragments": 333, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hansschlegelia beijingensis", "strain": "strain=DSM 25481", "accession": "GCA_014196425.1", "taxid": 1133344, "species_taxid": 1133344, "relation_to_type": "type", "validated": true, "ani": 77.3171, "matched_fragments": 266, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus kandeliae", "strain": "strain=J103", "accession": "GCA_003073115.1", "taxid": 2073160, "species_taxid": 2073160, "relation_to_type": "type", "validated": true, "ani": 77.3103, "matched_fragments": 413, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus yangtzensis", "strain": "strain=JL1095", "accession": "GCA_003073145.1", "taxid": 1443441, "species_taxid": 1443441, "relation_to_type": "type", "validated": true, "ani": 77.2941, "matched_fragments": 359, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus sediminis", "strain": "strain=PTG4-2", "accession": "GCA_003258595.1", "taxid": 2184697, "species_taxid": 2184697, "relation_to_type": "type", "validated": true, "ani": 77.2898, "matched_fragments": 450, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acuticoccus yangtzensis", "strain": "strain=JL1095", "accession": "GCA_001927245.1", "taxid": 1443441, "species_taxid": 1443441, "relation_to_type": "type", "validated": true, "ani": 77.2701, "matched_fragments": 366, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris tepida", "strain": "strain=GI", "accession": "GCA_003966715.1", "taxid": 2233851, "species_taxid": 2233851, "relation_to_type": "type", "validated": true, "ani": 77.2601, "matched_fragments": 299, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=DSM 102969", "accession": "GCA_004362745.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 77.2499, "matched_fragments": 464, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelatococcus caeni", "strain": "strain=DSM 103737", "accession": "GCA_014196925.1", "taxid": 1348468, "species_taxid": 1348468, "relation_to_type": "type", "validated": true, "ani": 77.217, "matched_fragments": 374, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter tagetidis", "strain": "strain=ATCC 700314", "accession": "GCA_003667445.1", "taxid": 60216, "species_taxid": 60216, "relation_to_type": "type", "validated": true, "ani": 77.0998, "matched_fragments": 336, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phreatobacter cathodiphilus", "strain": "strain=S-12", "accession": "GCA_003008515.1", "taxid": 1868589, "species_taxid": 1868589, "relation_to_type": "type", "validated": true, "ani": 77.0779, "matched_fragments": 337, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter tagetidis", "strain": "strain=DSM 11105", "accession": "GCA_014206845.1", "taxid": 60216, "species_taxid": 60216, "relation_to_type": "type", "validated": true, "ani": 77.0624, "matched_fragments": 330, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor soli", "strain": "strain=ZZ-1", "accession": "GCA_001050155.1", "taxid": 1670619, "species_taxid": 1670619, "relation_to_type": "type", "validated": true, "ani": 76.7854, "matched_fragments": 279, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ancylobacter sonchi", "strain": "strain=VKM B-3145", "accession": "GCA_018390695.1", "taxid": 1937790, "species_taxid": 1937790, "relation_to_type": "type", "validated": true, "ani": 76.7531, "matched_fragments": 401, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoplanes roseus", "strain": "strain=DSM 5909", "accession": "GCA_003258865.1", "taxid": 29409, "species_taxid": 29409, "relation_to_type": "type", "validated": true, "ani": 76.7051, "matched_fragments": 349, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga ossetica", "strain": "strain=V5/3M", "accession": "GCA_002741015.1", "taxid": 1882682, "species_taxid": 1882682, "relation_to_type": "type", "validated": true, "ani": 76.5305, "matched_fragments": 251, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium cerastii", "strain": "strain=DSM 23679", "accession": "GCA_022179125.1", "taxid": 932741, "species_taxid": 932741, "relation_to_type": "type", "validated": true, "ani": 76.5025, "matched_fragments": 289, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium terricola", "strain": "strain=17Sr1-39", "accession": "GCA_006151805.1", "taxid": 2583531, "species_taxid": 2583531, "relation_to_type": "type", "validated": true, "ani": 76.5011, "matched_fragments": 394, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium hispanicum", "strain": "strain=DSM 16372", "accession": "GCA_022179285.1", "taxid": 270350, "species_taxid": 270350, "relation_to_type": "type", "validated": true, "ani": 76.4709, "matched_fragments": 299, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium gregans", "strain": "strain=NBRC 103626", "accession": "GCA_022179245.1", "taxid": 374424, "species_taxid": 374424, "relation_to_type": "type", "validated": true, "ani": 76.3091, "matched_fragments": 282, "total_fragments": 1429, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 88.89, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_000374525.1", "gtdb_species": "s__Amorphus coralli", "ani": 85.6378, "matched_fragments": 1009, "total_fragments": 1429, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Amorphus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003610575.1", "gtdb_species": "s__Stappia sp003610575", "ani": 77.7519, "matched_fragments": 376, "total_fragments": 1429, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pseudoxanthobacteraceae;g__Pseudoxanthobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900148505.1", "gtdb_species": "s__Pseudoxanthobacter soli", "ani": 77.5076, "matched_fragments": 332, "total_fragments": 1429, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pseudoxanthobacteraceae;g__Pseudoxanthobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015904235.1", "gtdb_species": "s__L22 sp015904235", "ani": 77.4615, "matched_fragments": 402, "total_fragments": 1429, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Starkeya", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002770725.1", "gtdb_species": "s__Pleomorphomonas carboxyditropha", "ani": 76.9464, "matched_fragments": 330, "total_fragments": 1429, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Pleomorphomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "98.10", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007922615.2", "gtdb_species": "s__Nitratireductor_D sp007922615", "ani": 76.9196, "matched_fragments": 262, "total_fragments": 1429, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }