{ "tc_result": [ { "organism_name": "Devosia insulae", "strain": "strain=DS-56", "accession": "GCA_000970465.2", "taxid": 408174, "species_taxid": 408174, "relation_to_type": "type", "validated": true, "ani": 79.3577, "matched_fragments": 372, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia geojensis", "strain": "strain=BD-c194", "accession": "GCA_000969415.1", "taxid": 443610, "species_taxid": 443610, "relation_to_type": "type", "validated": true, "ani": 78.6942, "matched_fragments": 294, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia enhydra", "strain": "strain=ATCC 23634", "accession": "GCA_900119845.1", "taxid": 665118, "species_taxid": 665118, "relation_to_type": "type", "validated": true, "ani": 78.6261, "matched_fragments": 258, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Youhaiella tibetensis", "strain": "strain=fig4", "accession": "GCA_008000755.1", "taxid": 1447062, "species_taxid": 1447062, "relation_to_type": "type", "validated": true, "ani": 78.3793, "matched_fragments": 273, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Youhaiella tibetensis", "strain": "strain=CGMCC 1.12719", "accession": "GCA_014638565.1", "taxid": 1447062, "species_taxid": 1447062, "relation_to_type": "type", "validated": true, "ani": 78.3434, "matched_fragments": 285, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arsenicitalea aurantiaca", "strain": "strain=42-50", "accession": "GCA_003994485.1", "taxid": 1783274, "species_taxid": 1783274, "relation_to_type": "type", "validated": true, "ani": 78.2628, "matched_fragments": 221, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia beringensis", "strain": "strain=S02", "accession": "GCA_014926585.1", "taxid": 2657486, "species_taxid": 2657486, "relation_to_type": "type", "validated": true, "ani": 78.2044, "matched_fragments": 265, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia oryziradicis", "strain": "strain=G19", "accession": "GCA_016698645.1", "taxid": 2801335, "species_taxid": 2801335, "relation_to_type": "type", "validated": true, "ani": 78.1606, "matched_fragments": 246, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia limi", "strain": "strain=DSM 17137", "accession": "GCA_900128975.1", "taxid": 288995, "species_taxid": 288995, "relation_to_type": "type", "validated": true, "ani": 77.8457, "matched_fragments": 222, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia limi", "strain": "strain=DSM 17137", "accession": "GCA_000970435.1", "taxid": 288995, "species_taxid": 288995, "relation_to_type": "type", "validated": true, "ani": 77.8442, "matched_fragments": 218, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibacterium montanilacus", "strain": "strain=CCL18", "accession": "GCA_003992665.1", "taxid": 2185280, "species_taxid": 2185280, "relation_to_type": "type", "validated": true, "ani": 77.3397, "matched_fragments": 151, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibacterium lacus", "strain": "strain=XYN52", "accession": "GCA_003345525.1", "taxid": 2282655, "species_taxid": 2282655, "relation_to_type": "type", "validated": true, "ani": 77.1668, "matched_fragments": 187, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia pacifica", "strain": "strain=KCTC 32437", "accession": "GCA_014652635.1", "taxid": 1335967, "species_taxid": 1335967, "relation_to_type": "type", "validated": true, "ani": 77.1074, "matched_fragments": 140, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibacterium xiamenense", "strain": "strain=HS1C4-1", "accession": "GCA_021166475.1", "taxid": 2901140, "species_taxid": 2901140, "relation_to_type": "type", "validated": true, "ani": 77.0709, "matched_fragments": 160, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium nonmethylotrophicum", "strain": "strain=6HR-1", "accession": "GCA_004745635.1", "taxid": 1141884, "species_taxid": 1141884, "relation_to_type": "type", "validated": true, "ani": 76.3568, "matched_fragments": 149, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium oropedii", "strain": "strain=Pear76", "accession": "GCA_020889685.1", "taxid": 1571201, "species_taxid": 1571201, "relation_to_type": "type", "validated": true, "ani": 76.1417, "matched_fragments": 99, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylorubrum suomiense", "strain": "strain=DSM 14458", "accession": "GCA_022179765.1", "taxid": 144191, "species_taxid": 144191, "relation_to_type": "type", "validated": true, "ani": 76.1134, "matched_fragments": 105, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium cajani", "strain": "strain=1010", "accession": "GCA_009759665.1", "taxid": 1928661, "species_taxid": 1928661, "relation_to_type": "type", "validated": true, "ani": 76.1105, "matched_fragments": 124, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium longum", "strain": "strain=DSM 23933", "accession": "GCA_022179385.1", "taxid": 767694, "species_taxid": 767694, "relation_to_type": "type", "validated": true, "ani": 75.8578, "matched_fragments": 106, "total_fragments": 626, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 62.67, "contamination": 4.69, "strain_heterogeneity": 50.0 }, "gtdb_result": [ { "accession": "GCA_017307495.1", "gtdb_species": "s__Devosia_A sp017307495", "ani": 79.8034, "matched_fragments": 355, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.70", "min_intra_species_ani": "98.70", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014873135.1", "gtdb_species": "s__Devosia_A sp014873135", "ani": 79.6721, "matched_fragments": 364, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899085.1", "gtdb_species": "s__Devosia_A sp001899085", "ani": 79.6492, "matched_fragments": 380, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_016713105.1", "gtdb_species": "s__Devosia_A sp016713105", "ani": 79.6407, "matched_fragments": 364, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001402915.1", "gtdb_species": "s__Devosia_A sp001402915", "ani": 79.6149, "matched_fragments": 375, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001899075.1", "gtdb_species": "s__Devosia_A sp001899075", "ani": 79.4848, "matched_fragments": 351, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_016213505.1", "gtdb_species": "s__Devosia_A nanyangense", "ani": 79.3478, "matched_fragments": 334, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001425235.1", "gtdb_species": "s__Devosia_A sp001425235", "ani": 79.2455, "matched_fragments": 382, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.96", "min_intra_species_ani": "97.96", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903842455.1", "gtdb_species": "s__Devosia_A sp903842455", "ani": 79.0484, "matched_fragments": 348, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015657675.1", "gtdb_species": "s__Devosia_A sp015657675", "ani": 78.9136, "matched_fragments": 329, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004144345.1", "gtdb_species": "s__Devosia_A sp004144345", "ani": 78.826, "matched_fragments": 319, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000969415.1", "gtdb_species": "s__Devosia geojensis", "ani": 78.7232, "matched_fragments": 292, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900119845.1", "gtdb_species": "s__Devosia_A enhydra", "ani": 78.6006, "matched_fragments": 260, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018828145.1", "gtdb_species": "s__Devosia sp018828145", "ani": 78.3515, "matched_fragments": 270, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.98", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_014837245.1", "gtdb_species": "s__Devosia sp014837245", "ani": 78.2941, "matched_fragments": 194, "total_fragments": 626, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }