{ "tc_result": [ { "organism_name": "Devosia marina", "strain": "strain=L53-10-65", "accession": "GCA_009758415.1", "taxid": 2683198, "species_taxid": 2683198, "relation_to_type": "type", "validated": true, "ani": 87.8568, "matched_fragments": 841, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia subaequoris", "strain": "strain=DSM 23447", "accession": "GCA_014197055.1", "taxid": 395930, "species_taxid": 395930, "relation_to_type": "type", "validated": true, "ani": 86.3853, "matched_fragments": 827, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia subaequoris", "strain": "strain=HST3-14", "accession": "GCA_024158985.1", "taxid": 395930, "species_taxid": 395930, "relation_to_type": "type", "validated": true, "ani": 86.3493, "matched_fragments": 830, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia indica", "strain": "strain=IO390501", "accession": "GCA_003056405.1", "taxid": 2079253, "species_taxid": 2079253, "relation_to_type": "type", "validated": true, "ani": 85.6152, "matched_fragments": 794, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia salina", "strain": "strain=SCS-3", "accession": "GCA_019504385.1", "taxid": 2860336, "species_taxid": 2860336, "relation_to_type": "type", "validated": true, "ani": 82.98, "matched_fragments": 723, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia elaeis", "strain": "strain=S37", "accession": "GCA_001650025.1", "taxid": 1770058, "species_taxid": 1770058, "relation_to_type": "type", "validated": true, "ani": 81.2486, "matched_fragments": 613, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia lucknowensis", "strain": "strain=L15", "accession": "GCA_900177655.1", "taxid": 1096929, "species_taxid": 1096929, "relation_to_type": "type", "validated": true, "ani": 80.3975, "matched_fragments": 609, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia faecipullorum", "strain": "strain=CC-YST696", "accession": "GCA_015158295.1", "taxid": 2755039, "species_taxid": 2755039, "relation_to_type": "type", "validated": true, "ani": 80.2423, "matched_fragments": 540, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia chinhatensis", "strain": "strain=IPL18", "accession": "GCA_000969445.1", "taxid": 429727, "species_taxid": 429727, "relation_to_type": "type", "validated": true, "ani": 80.1292, "matched_fragments": 544, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia rhizoryzae", "strain": "strain=LEGU1", "accession": "GCA_016698665.1", "taxid": 2774137, "species_taxid": 2774137, "relation_to_type": "type", "validated": true, "ani": 79.6932, "matched_fragments": 505, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia beringensis", "strain": "strain=S02", "accession": "GCA_014926585.1", "taxid": 2657486, "species_taxid": 2657486, "relation_to_type": "type", "validated": true, "ani": 79.4208, "matched_fragments": 545, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia oryziradicis", "strain": "strain=G19", "accession": "GCA_016698645.1", "taxid": 2801335, "species_taxid": 2801335, "relation_to_type": "type", "validated": true, "ani": 79.209, "matched_fragments": 489, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 70.83, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_009758415.1", "gtdb_species": "s__Devosia marina", "ani": 87.8568, "matched_fragments": 841, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.05", "min_intra_species_ani": "97.05", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014197055.1", "gtdb_species": "s__Devosia subaequoris", "ani": 86.376, "matched_fragments": 828, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003056405.1", "gtdb_species": "s__Devosia indica", "ani": 85.6102, "matched_fragments": 794, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016411825.1", "gtdb_species": "s__Devosia sp016411825", "ani": 81.5829, "matched_fragments": 683, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001650025.1", "gtdb_species": "s__Devosia elaeis", "ani": 81.2338, "matched_fragments": 615, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900631955.1", "gtdb_species": "s__Devosia sp001899045", "ani": 80.4971, "matched_fragments": 549, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "98.08", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_900177655.1", "gtdb_species": "s__Devosia lucknowensis", "ani": 80.4167, "matched_fragments": 607, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000969445.1", "gtdb_species": "s__Devosia chinhatensis", "ani": 80.1292, "matched_fragments": 544, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000743575.1", "gtdb_species": "s__Devosia riboflavina", "ani": 79.7466, "matched_fragments": 533, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001427605.1", "gtdb_species": "s__Devosia sp001427605", "ani": 79.6861, "matched_fragments": 538, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017307565.1", "gtdb_species": "s__Devosia sp017307565", "ani": 79.3145, "matched_fragments": 435, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002375765.1", "gtdb_species": "s__Pelagibacterium sp002375765", "ani": 77.29, "matched_fragments": 210, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Pelagibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.84", "min_intra_species_ani": "99.84", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" } ] }