{ "tc_result": [ { "organism_name": "Oricola indica", "strain": "strain=JL-62", "accession": "GCA_019966595.1", "taxid": 2872591, "species_taxid": 2872591, "relation_to_type": "type", "validated": true, "ani": 76.2143, "matched_fragments": 91, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pannonibacter carbonis", "strain": "strain=Q4.6", "accession": "GCA_003012935.1", "taxid": 2067569, "species_taxid": 2067569, "relation_to_type": "type", "validated": true, "ani": 76.1023, "matched_fragments": 79, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_003258835.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 75.9885, "matched_fragments": 77, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium zundukense", "strain": "strain=Tri-48; RCAM 03910", "accession": "GCA_002764115.1", "taxid": 1867719, "species_taxid": 1867719, "relation_to_type": "type", "validated": true, "ani": 75.9221, "matched_fragments": 67, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stappia albiluteola", "strain": "strain=F7233", "accession": "GCA_014050225.1", "taxid": 2758565, "species_taxid": 2758565, "relation_to_type": "type", "validated": true, "ani": 75.9013, "matched_fragments": 59, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brucella suis", "strain": "strain=1330", "accession": "GCA_000007505.1", "taxid": 29461, "species_taxid": 29461, "relation_to_type": "suspected-type", "validated": true, "ani": 75.8116, "matched_fragments": 71, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brucella melitensis", "strain": "strain=16M", "accession": "GCA_000160295.1", "taxid": 29459, "species_taxid": 29459, "relation_to_type": "suspected-type", "validated": true, "ani": 75.7998, "matched_fragments": 71, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cucumibacter marinus", "strain": "strain=DSM 18995", "accession": "GCA_000429865.1", "taxid": 1121252, "species_taxid": 1121252, "relation_to_type": "type", "validated": true, "ani": 75.7955, "matched_fragments": 61, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brucella melitensis", "strain": "strain=16M", "accession": "GCA_000007125.1", "taxid": 29459, "species_taxid": 29459, "relation_to_type": "suspected-type", "validated": true, "ani": 75.7812, "matched_fragments": 72, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium sophorae", "strain": "strain=CCBAU 03422", "accession": "GCA_003010965.1", "taxid": 1520277, "species_taxid": 1520277, "relation_to_type": "type", "validated": true, "ani": 75.7623, "matched_fragments": 51, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia soli", "strain": "strain=DSM 19436", "accession": "GCA_900129325.1", "taxid": 446684, "species_taxid": 446684, "relation_to_type": "type", "validated": true, "ani": 75.757, "matched_fragments": 66, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pleomorphomonas koreensis", "strain": "strain=DSM 23070", "accession": "GCA_000425185.1", "taxid": 257440, "species_taxid": 257440, "relation_to_type": "type", "validated": true, "ani": 75.721, "matched_fragments": 53, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium pellucidum", "strain": "strain=BT25", "accession": "GCA_013327855.1", "taxid": 2740464, "species_taxid": 2740464, "relation_to_type": "type", "validated": true, "ani": 75.7159, "matched_fragments": 74, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brucella ovis", "strain": "strain=ATCC 25840", "accession": "GCA_000016845.1", "taxid": 236, "species_taxid": 236, "relation_to_type": "type", "validated": true, "ani": 75.6845, "matched_fragments": 72, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phyllobacterium phragmitis", "strain": "strain=1N-3", "accession": "GCA_002980495.1", "taxid": 2670329, "species_taxid": 2670329, "relation_to_type": "type", "validated": true, "ani": 75.6819, "matched_fragments": 89, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium metallidurans", "strain": "strain=STM 2683", "accession": "GCA_000350085.1", "taxid": 489722, "species_taxid": 489722, "relation_to_type": "type", "validated": true, "ani": 75.6683, "matched_fragments": 95, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pannonibacter indicus", "strain": "strain=DSM 23407", "accession": "GCA_001517385.1", "taxid": 466044, "species_taxid": 466044, "relation_to_type": "type", "validated": true, "ani": 75.639, "matched_fragments": 92, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pannonibacter indicus", "strain": "strain=DSM 23407", "accession": "GCA_001418225.1", "taxid": 466044, "species_taxid": 466044, "relation_to_type": "type", "validated": true, "ani": 75.639, "matched_fragments": 92, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium waimense", "strain": "strain=ICMP19557", "accession": "GCA_003601975.1", "taxid": 1300307, "species_taxid": 1300307, "relation_to_type": "type", "validated": true, "ani": 75.6126, "matched_fragments": 97, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Afifella pfennigii", "strain": "strain=DSM 17143", "accession": "GCA_000688515.1", "taxid": 209897, "species_taxid": 209897, "relation_to_type": "type", "validated": true, "ani": 75.5713, "matched_fragments": 66, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aureimonas psammosilenae", "strain": "strain=YIM DR1026", "accession": "GCA_009176975.1", "taxid": 2495496, "species_taxid": 2495496, "relation_to_type": "type", "validated": true, "ani": 75.5694, "matched_fragments": 55, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus lutimaris", "strain": "strain=CECT 8525", "accession": "GCA_003337565.1", "taxid": 1490030, "species_taxid": 1490030, "relation_to_type": "type", "validated": true, "ani": 75.5496, "matched_fragments": 56, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Breoghania corrubedonensis", "strain": "strain=DSM 23382", "accession": "GCA_003053845.1", "taxid": 665038, "species_taxid": 665038, "relation_to_type": "type", "validated": true, "ani": 75.5489, "matched_fragments": 70, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus zhejiangensis", "strain": "strain=J6", "accession": "GCA_002847445.1", "taxid": 1077935, "species_taxid": 1077935, "relation_to_type": "type", "validated": true, "ani": 75.5431, "matched_fragments": 56, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibium hamelinense", "strain": "strain=ATCC BAA-252", "accession": "GCA_007830545.1", "taxid": 150831, "species_taxid": 150831, "relation_to_type": "type", "validated": true, "ani": 75.5141, "matched_fragments": 55, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibium hamelinense", "strain": "strain=NBRC 16783", "accession": "GCA_009711505.1", "taxid": 150831, "species_taxid": 150831, "relation_to_type": "type", "validated": true, "ani": 75.475, "matched_fragments": 57, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibium polysiphoniae", "strain": "strain=KACC 19711", "accession": "GCA_014842925.1", "taxid": 2571221, "species_taxid": 2571221, "relation_to_type": "type", "validated": true, "ani": 75.4696, "matched_fragments": 56, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium huautlense", "strain": "strain=DSM 21817", "accession": "GCA_002968575.1", "taxid": 67774, "species_taxid": 67774, "relation_to_type": "type", "validated": true, "ani": 75.2209, "matched_fragments": 69, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_016865015.1", "gtdb_species": "s__GCA-2746425 sp016865015", "ani": 78.8113, "matched_fragments": 496, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__GCA-2746425;g__GCA-2746425", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002746425.1", "gtdb_species": "s__GCA-2746425 sp002746425", "ani": 76.6785, "matched_fragments": 148, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__GCA-2746425;g__GCA-2746425", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001305515.1", "gtdb_species": "s__Prosthecomicrobium_A hirschii", "ani": 76.1709, 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"total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.82", "min_intra_species_ani": "97.16", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003550135.1", "gtdb_species": "s__Ochrobactrum_B haematophila_B", "ani": 76.0712, "matched_fragments": 94, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales_A;f__Rhizobiaceae_A;g__Ochrobactrum_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014692675.1", "gtdb_species": "s__Roseibium aggregatum_C", "ani": 75.9272, "matched_fragments": 92, "total_fragments": 1354, 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__GCA-013693735", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }