{ "tc_result": [ { "organism_name": "Aquibium oceanicum", "strain": "strain=B7", "accession": "GCA_001889605.1", "taxid": 1670800, "species_taxid": 1670800, "relation_to_type": "type", "validated": true, "ani": 96.5135, "matched_fragments": 1230, "total_fragments": 1370, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aquibium microcysteis", "strain": "strain=NIBR3", "accession": "GCA_014495845.1", "taxid": 675281, "species_taxid": 675281, "relation_to_type": "type", "validated": true, "ani": 81.5615, "matched_fragments": 830, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibium carbonis", "strain": "strain=B2.3", "accession": "GCA_003970795.1", "taxid": 2495581, "species_taxid": 2495581, "relation_to_type": "type", "validated": true, "ani": 80.8326, "matched_fragments": 720, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor alexandrii", "strain": "strain=Z3-1", "accession": "GCA_004000215.1", "taxid": 2448161, "species_taxid": 2448161, "relation_to_type": "type", "validated": true, "ani": 79.2522, "matched_fragments": 574, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium tamadayense", "strain": "strain=DSM 28320", "accession": "GCA_003863365.1", "taxid": 425306, "species_taxid": 425306, "relation_to_type": "type", "validated": true, "ani": 79.002, "matched_fragments": 532, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium atlanticum", "strain": "strain=CNPSo 3140", "accession": "GCA_003289965.1", "taxid": 2233532, "species_taxid": 2233532, "relation_to_type": "type", "validated": true, "ani": 78.8795, "matched_fragments": 532, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor arenosus", "strain": "strain=CAU 1489", "accession": "GCA_009742725.1", "taxid": 2682096, "species_taxid": 2682096, "relation_to_type": "type", "validated": true, "ani": 78.8378, "matched_fragments": 563, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium onobrychidis", "strain": "strain=OM4", "accession": "GCA_024707545.1", "taxid": 2775404, "species_taxid": 2775404, "relation_to_type": "type", "validated": true, "ani": 78.8232, "matched_fragments": 482, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sediminum", "strain": "strain=KCTC 42205", "accession": "GCA_013240295.1", "taxid": 1849104, "species_taxid": 1849104, "relation_to_type": "type", "validated": true, "ani": 78.7948, "matched_fragments": 509, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium comanense", "strain": "strain=3P27G6", "accession": "GCA_005503535.1", "taxid": 2502215, "species_taxid": 2502215, "relation_to_type": "type", "validated": true, "ani": 78.7893, "matched_fragments": 538, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium hawassense", "strain": "strain=AC99b", "accession": "GCA_003289945.1", "taxid": 1209954, "species_taxid": 1209954, "relation_to_type": "type", "validated": true, "ani": 78.7769, "matched_fragments": 545, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor pacificus", "strain": "strain=pht-3B", "accession": "GCA_000300335.1", "taxid": 1231180, "species_taxid": 1231180, "relation_to_type": "type", "validated": true, "ani": 78.7584, "matched_fragments": 443, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium neociceri", "strain": "strain=CCANP35", "accession": "GCA_013520985.1", "taxid": 1307853, "species_taxid": 1307853, "relation_to_type": "type", "validated": true, "ani": 78.6302, "matched_fragments": 518, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium albiziae", "strain": "strain=DSM 21822", "accession": "GCA_900114255.1", "taxid": 335020, "species_taxid": 335020, "relation_to_type": "type", "validated": true, "ani": 78.6133, "matched_fragments": 519, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelativorans xinjiangense", "strain": "strain=lm93", "accession": "GCA_009812055.1", "taxid": 2681485, "species_taxid": 2681485, "relation_to_type": "type", "validated": true, "ani": 78.5439, "matched_fragments": 450, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium australicum", "strain": "strain=WSM2073", "accession": "GCA_000230995.3", "taxid": 536018, "species_taxid": 536018, "relation_to_type": "type", "validated": true, "ani": 78.4446, "matched_fragments": 500, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor soli", "strain": "strain=ZZ-1", "accession": "GCA_001050155.1", "taxid": 1670619, "species_taxid": 1670619, "relation_to_type": "type", "validated": true, "ani": 78.3702, "matched_fragments": 439, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zhengella mangrovi", "strain": "strain=X9-2-2", "accession": "GCA_002727065.1", "taxid": 1982044, "species_taxid": 1982044, "relation_to_type": "type", "validated": true, "ani": 78.0044, "matched_fragments": 401, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ciceribacter ferrooxidans", "strain": "strain=F8825", "accession": "GCA_004137355.1", "taxid": 2509717, "species_taxid": 2509717, "relation_to_type": "type", "validated": true, "ani": 77.1984, "matched_fragments": 280, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquamicrobium zhengzhouense", "strain": "strain=cd-1", "accession": "GCA_016124105.1", "taxid": 2781738, "species_taxid": 2781738, "relation_to_type": "type", "validated": true, "ani": 76.8982, "matched_fragments": 188, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ancylobacter oerskovii", "strain": "strain=CCM 7435", "accession": "GCA_018390555.1", "taxid": 459519, "species_taxid": 459519, "relation_to_type": "type", "validated": true, "ani": 76.6877, "matched_fragments": 260, "total_fragments": 1370, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 51.56, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001889605.1", "gtdb_species": "s__Mesorhizobium_E oceanicum", "ani": 96.5135, "matched_fragments": 1230, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_014495845.1", "gtdb_species": "s__Mesorhizobium_E sp014495845", "ani": 81.5616, "matched_fragments": 831, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003970795.1", "gtdb_species": "s__Mesorhizobium_E carbonis", "ani": 80.8465, "matched_fragments": 718, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017305835.1", "gtdb_species": "s__RCIO01 sp017305835", "ani": 79.8382, "matched_fragments": 565, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__RCIO01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007922615.2", "gtdb_species": "s__Nitratireductor_D sp007922615", "ani": 79.5111, "matched_fragments": 664, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Nitratireductor_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905339215.1", "gtdb_species": "s__DUSC01 sp008933895", "ani": 79.4417, "matched_fragments": 612, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__DUSC01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.82", "min_intra_species_ani": "99.82", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_014860725.1", "gtdb_species": "s__Aquamicrobium_A sp014860725", "ani": 79.4064, "matched_fragments": 309, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aquamicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003577315.1", "gtdb_species": "s__Aquamicrobium_A sp003577315", "ani": 79.3488, "matched_fragments": 475, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aquamicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003012745.1", "gtdb_species": "s__Mesorhizobium_D ephedrae", "ani": 79.2952, "matched_fragments": 594, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016756535.1", "gtdb_species": "s__Mesorhizobium sp016756535", "ani": 79.1249, "matched_fragments": 579, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006442815.1", "gtdb_species": "s__Mesorhizobium sp006442815", "ani": 78.9587, "matched_fragments": 531, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001510895.1", "gtdb_species": "s__Mesorhizobium loti_A", "ani": 78.9492, "matched_fragments": 542, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003289965.1", "gtdb_species": "s__Mesorhizobium atlanticum", "ani": 78.8453, "matched_fragments": 537, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009742725.1", "gtdb_species": "s__Nitratireductor_D arenosus", "ani": 78.8423, "matched_fragments": 562, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Nitratireductor_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003289945.1", "gtdb_species": "s__Mesorhizobium hawassense", "ani": 78.7818, "matched_fragments": 545, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013240295.1", "gtdb_species": "s__Aquamicrobium_A sediminum", "ani": 78.7785, "matched_fragments": 512, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aquamicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004016445.2", "gtdb_species": "s__Mesorhizobium sp004016445", "ani": 78.7401, "matched_fragments": 547, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.24", "min_intra_species_ani": "96.92", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014873545.1", "gtdb_species": "s__OAS926 sp014873545", "ani": 78.6734, "matched_fragments": 507, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__OAS926", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013520985.1", "gtdb_species": "s__Mesorhizobium sp013520985", "ani": 78.6104, "matched_fragments": 522, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900185715.1", "gtdb_species": "s__Bosea sp900185715", "ani": 76.5243, "matched_fragments": 273, "total_fragments": 1370, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Bosea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }