{ "tc_result": [ { "organism_name": "Notoacmeibacter ruber", "strain": "strain=M2BS9Y-3-1", "accession": "GCA_003668555.1", "taxid": 2670375, "species_taxid": 2670375, "relation_to_type": "type", "validated": true, "ani": 78.7053, "matched_fragments": 384, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Notoacmeibacter marinus", "strain": "strain=XMTR2A4", "accession": "GCA_002238045.1", "taxid": 1876515, "species_taxid": 1876515, "relation_to_type": "type", "validated": true, "ani": 78.6858, "matched_fragments": 427, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zhengella mangrovi", "strain": "strain=X9-2-2", "accession": "GCA_002727065.1", "taxid": 1982044, "species_taxid": 1982044, "relation_to_type": "type", "validated": true, "ani": 77.1552, "matched_fragments": 201, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor pacificus", "strain": "strain=pht-3B", "accession": "GCA_000300335.1", "taxid": 1231180, "species_taxid": 1231180, "relation_to_type": "type", "validated": true, "ani": 77.146, "matched_fragments": 197, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor alexandrii", "strain": "strain=Z3-1", "accession": "GCA_004000215.1", "taxid": 2448161, "species_taxid": 2448161, "relation_to_type": "type", "validated": true, "ani": 77.0649, "matched_fragments": 179, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium camelthorni", "strain": "strain=CCNWXJ 40-4", "accession": "GCA_011045125.1", "taxid": 475069, "species_taxid": 475069, "relation_to_type": "type", "validated": true, "ani": 76.968, "matched_fragments": 198, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oricola thermophila", "strain": "strain=MEBiC13590", "accession": "GCA_013358405.1", "taxid": 2742145, "species_taxid": 2742145, "relation_to_type": "type", "validated": true, "ani": 76.9389, "matched_fragments": 156, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibium microcysteis", "strain": "strain=NIBR3", "accession": "GCA_014495845.1", "taxid": 675281, "species_taxid": 675281, "relation_to_type": "type", "validated": true, "ani": 76.8637, "matched_fragments": 203, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sophorae", "strain": "strain=ICMP 19535", "accession": "GCA_002270415.1", "taxid": 1300294, "species_taxid": 1300294, "relation_to_type": "type", "validated": true, "ani": 76.8588, "matched_fragments": 191, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium metallidurans", "strain": "strain=STM 2683", "accession": "GCA_000350085.1", "taxid": 489722, "species_taxid": 489722, "relation_to_type": "type", "validated": true, "ani": 76.8309, "matched_fragments": 179, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibium carbonis", "strain": "strain=B2.3", "accession": "GCA_003970795.1", "taxid": 2495581, "species_taxid": 2495581, "relation_to_type": "type", "validated": true, "ani": 76.8158, "matched_fragments": 167, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium temperatum", "strain": "strain=SDW018", "accession": "GCA_002284575.1", "taxid": 241416, "species_taxid": 241416, "relation_to_type": "type", "validated": true, "ani": 76.7815, "matched_fragments": 185, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium qingshengii", "strain": "strain=CGMCC 1.12097", "accession": "GCA_900103325.1", "taxid": 1165689, "species_taxid": 1165689, "relation_to_type": "type", "validated": true, "ani": 76.7735, "matched_fragments": 183, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium waimense", "strain": "strain=ICMP19557", "accession": "GCA_003601975.1", "taxid": 1300307, "species_taxid": 1300307, "relation_to_type": "type", "validated": true, "ani": 76.7274, "matched_fragments": 200, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sangaii", "strain": "strain=DSM 100039", "accession": "GCA_014207355.1", "taxid": 505389, "species_taxid": 505389, "relation_to_type": "type", "validated": true, "ani": 76.7239, "matched_fragments": 190, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquamicrobium defluvii", "strain": "strain=DSM 11603", "accession": "GCA_004363725.1", "taxid": 69279, "species_taxid": 69279, "relation_to_type": "type", "validated": true, "ani": 76.7104, "matched_fragments": 171, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=HC19", "accession": "GCA_014595955.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 76.6679, "matched_fragments": 150, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=19-2017", "accession": "GCA_018310375.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 76.6679, "matched_fragments": 150, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aminobacter niigataensis", "strain": "strain=DSM 7050", "accession": "GCA_014200015.1", "taxid": 83265, "species_taxid": 83265, "relation_to_type": "type", "validated": true, "ani": 76.6556, "matched_fragments": 187, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelativorans intermedius", "strain": "strain=LMG 28482", "accession": "GCA_025398255.1", "taxid": 515947, "species_taxid": 515947, "relation_to_type": "type", "validated": true, "ani": 76.6262, "matched_fragments": 156, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jiella sonneratiae", "strain": "strain=MQZ13P-4", "accession": "GCA_017353515.1", "taxid": 2816856, "species_taxid": 2816856, "relation_to_type": "type", "validated": true, "ani": 76.5728, "matched_fragments": 179, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium alkalisoli", "strain": "strain=DSM 21826", "accession": "GCA_002968635.1", "taxid": 528178, "species_taxid": 528178, "relation_to_type": "type", "validated": true, "ani": 76.3672, "matched_fragments": 130, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium tubonense", "strain": "strain=CCBAU 85046", "accession": "GCA_003240585.1", "taxid": 484088, "species_taxid": 484088, "relation_to_type": "type", "validated": true, "ani": 76.1724, "matched_fragments": 125, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Afipia felis", "strain": "strain=ATCC 53690", "accession": "GCA_000314735.2", "taxid": 1035, "species_taxid": 1035, "relation_to_type": "type", "validated": true, "ani": 76.1579, "matched_fragments": 81, "total_fragments": 947, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003668555.1", "gtdb_species": "s__Notoacmeibacter ruber", "ani": 78.7053, "matched_fragments": 384, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Notoacmeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002238045.1", "gtdb_species": "s__Notoacmeibacter marinus", "ani": 78.6762, "matched_fragments": 428, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Notoacmeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.91", "min_intra_species_ani": "97.88", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002708825.1", "gtdb_species": "s__Zhengella sp002708825", "ani": 77.49, "matched_fragments": 214, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Zhengella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002727065.1", "gtdb_species": "s__Zhengella mangrovi", "ani": 77.1552, "matched_fragments": 201, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Zhengella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000300335.1", "gtdb_species": "s__Nitratireductor pacificus", "ani": 77.146, "matched_fragments": 197, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Nitratireductor", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001014615.2", "gtdb_species": "s__Aquamicrobium_A sp001014615", "ani": 77.0697, "matched_fragments": 206, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aquamicrobium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009749525.1", "gtdb_species": "s__Im94 sp009749525", "ani": 76.9951, "matched_fragments": 179, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Im94", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014904745.1", "gtdb_species": "s__Oricola sp014904745", "ani": 76.9897, "matched_fragments": 195, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Oricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013358405.1", "gtdb_species": "s__Oricola thermophila", "ani": 76.9549, "matched_fragments": 155, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Oricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007922615.2", "gtdb_species": "s__Nitratireductor_D sp007922615", "ani": 76.9089, "matched_fragments": 188, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Nitratireductor_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000359125.1", "gtdb_species": "s__Mesorhizobium sp000359125", "ani": 76.9046, "matched_fragments": 178, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014495845.1", "gtdb_species": "s__Mesorhizobium_E sp014495845", "ani": 76.8756, "matched_fragments": 202, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000350085.1", "gtdb_species": "s__Mesorhizobium metallidurans", "ani": 76.8309, "matched_fragments": 179, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007829525.1", "gtdb_species": "s__VLJP01 sp007829525", "ani": 76.8172, "matched_fragments": 142, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__VLJP01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003970795.1", "gtdb_species": "s__Mesorhizobium_E carbonis", "ani": 76.8158, "matched_fragments": 167, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003012745.1", "gtdb_species": "s__Mesorhizobium_D ephedrae", "ani": 76.8105, "matched_fragments": 201, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900115245.1", "gtdb_species": "s__Mesorhizobium sp900115245", "ani": 76.7907, "matched_fragments": 176, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003253745.1", "gtdb_species": "s__Mesorhizobium kowhaii", "ani": 76.7471, "matched_fragments": 197, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003601975.1", "gtdb_species": "s__Mesorhizobium waimense", "ani": 76.716, "matched_fragments": 201, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014207355.1", "gtdb_species": "s__Mesorhizobium sangaii", "ani": 76.7122, "matched_fragments": 191, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014200015.1", "gtdb_species": "s__Aminobacter niigataensis", "ani": 76.656, "matched_fragments": 187, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aminobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.01", "min_intra_species_ani": "98.00", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002700095.1", "gtdb_species": "s__Jiella sp002700095", "ani": 76.5782, "matched_fragments": 172, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Jiella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002968635.1", "gtdb_species": "s__Neorhizobium alkalisoli", "ani": 76.3672, "matched_fragments": 130, "total_fragments": 947, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }