{ "tc_result": [ { "organism_name": "Sinirhodobacter hankyongi", "strain": "strain=BO-81", "accession": "GCA_003664585.1", "taxid": 2294033, "species_taxid": 2294033, "relation_to_type": "type", "validated": true, "ani": 77.6983, "matched_fragments": 126, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava dalianensis", "strain": "strain=DLFJ1-1", "accession": "GCA_000715505.1", "taxid": 1185766, "species_taxid": 1185766, "relation_to_type": "type", "validated": true, "ani": 77.6429, "matched_fragments": 129, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava dalianensis", "strain": "strain=CGMCC 1.12325", "accession": "GCA_900115035.1", "taxid": 1185766, "species_taxid": 1185766, "relation_to_type": "type", "validated": true, "ani": 77.6118, "matched_fragments": 131, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava sediminum", "strain": "strain=TAW-CT134", "accession": "GCA_002020355.1", "taxid": 1915319, "species_taxid": 1915319, "relation_to_type": "type", "validated": true, "ani": 77.6114, "matched_fragments": 144, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava pacifica", "strain": "strain=DSM 10166", "accession": "GCA_000714535.1", "taxid": 285109, "species_taxid": 285109, "relation_to_type": "type", "validated": true, "ani": 77.5627, "matched_fragments": 131, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava atlantica", "strain": "strain=13D2W-2", "accession": "GCA_000737065.1", "taxid": 1317124, "species_taxid": 1317124, "relation_to_type": "type", "validated": true, "ani": 77.4583, "matched_fragments": 133, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava nitratireducens", "strain": "strain=25B10_4", "accession": "GCA_001940525.2", "taxid": 1915078, "species_taxid": 1915078, "relation_to_type": "type", "validated": true, "ani": 77.4562, "matched_fragments": 125, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sinirhodobacter huangdaonensis", "strain": "strain=CGMCC 1.12963", "accession": "GCA_004022465.1", "taxid": 2501515, "species_taxid": 2501515, "relation_to_type": "type", "validated": true, "ani": 77.4256, "matched_fragments": 147, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava marina", "strain": "strain=11.10-0-13", "accession": "GCA_002020135.1", "taxid": 1915077, "species_taxid": 1915077, "relation_to_type": "type", "validated": true, "ani": 77.355, "matched_fragments": 137, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioclava indica", "strain": "strain=DT23-4", "accession": "GCA_000714545.1", "taxid": 1353528, "species_taxid": 1353528, "relation_to_type": "type", "validated": true, "ani": 77.2595, "matched_fragments": 121, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter ruber", "strain": "strain=CCP-1", "accession": "GCA_009908315.1", "taxid": 1985673, "species_taxid": 1985673, "relation_to_type": "type", "validated": true, "ani": 77.2037, "matched_fragments": 84, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter aestuarii", "strain": "strain=JA296", "accession": "GCA_003053525.1", "taxid": 453582, "species_taxid": 453582, "relation_to_type": "type", "validated": true, "ani": 77.199, "matched_fragments": 112, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter aestuarii", "strain": "strain=DSM 19945", "accession": "GCA_900156655.1", "taxid": 453582, "species_taxid": 453582, "relation_to_type": "type", "validated": true, "ani": 77.1989, "matched_fragments": 112, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudogemmobacter bohemicus", "strain": "strain=Cd-10", "accession": "GCA_003290025.1", "taxid": 2250708, "species_taxid": 2250708, "relation_to_type": "type", "validated": true, "ani": 77.1654, "matched_fragments": 87, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus limosus", "strain": "strain=JCM 17370", "accession": "GCA_009711185.1", "taxid": 913252, "species_taxid": 913252, "relation_to_type": "type", "validated": true, "ani": 76.9151, "matched_fragments": 107, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudogemmobacter hezensis", "strain": "strain=D13-10-4-6", "accession": "GCA_013155295.1", "taxid": 2737662, "species_taxid": 2737662, "relation_to_type": "type", "validated": true, "ani": 76.8433, "matched_fragments": 91, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus mutanolyticus", "strain": "strain=RSP-02", "accession": "GCA_003285265.1", "taxid": 1499308, "species_taxid": 1499308, "relation_to_type": "type", "validated": true, "ani": 76.781, "matched_fragments": 63, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus nototheniae", "strain": "strain=I-41R45", "accession": "GCA_004335005.1", "taxid": 2489002, "species_taxid": 2489002, "relation_to_type": "type", "validated": true, "ani": 76.5812, "matched_fragments": 87, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimixticola soesokkakensis", "strain": "strain=CECT 8620", "accession": "GCA_900172375.1", "taxid": 1519096, "species_taxid": 1519096, "relation_to_type": "type", "validated": true, "ani": 76.31, "matched_fragments": 80, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=CGMCC 1.8894", "accession": "GCA_900107025.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 76.1027, "matched_fragments": 59, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=ZS2-28", "accession": "GCA_014681765.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 76.1027, "matched_fragments": 59, "total_fragments": 414, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 37.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001856665.1", "gtdb_species": "s__LPB0142 sp001856665", "ani": 78.4573, "matched_fragments": 168, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__LPB0142", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.52", "min_intra_species_ani": "98.52", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002358085.1", "gtdb_species": "s__Thioclava arenosa", "ani": 78.2265, "matched_fragments": 134, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002563775.1", "gtdb_species": "s__Thioclava sp002563775", "ani": 77.997, "matched_fragments": 136, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0406, "mean_intra_species_ani": "95.45", "min_intra_species_ani": "95.45", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002452815.1", "gtdb_species": "s__UBA6796 sp002452815", "ani": 77.8819, "matched_fragments": 149, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA6796", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.98", "min_intra_species_ani": "97.98", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003664585.1", "gtdb_species": "s__Paenirhodobacter hankyongi", "ani": 77.7187, "matched_fragments": 126, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paenirhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000715505.1", "gtdb_species": "s__Thioclava dalianensis", "ani": 77.6388, "matched_fragments": 130, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000737065.1", "gtdb_species": "s__Thioclava atlantica", "ani": 77.4816, "matched_fragments": 132, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005144475.1", "gtdb_species": "s__Rhodobacter capsulatus_C", "ani": 77.4687, "matched_fragments": 127, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001940525.2", "gtdb_species": "s__Thioclava nitratireducens", "ani": 77.4562, "matched_fragments": 125, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "98.50", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_004022265.1", "gtdb_species": "s__Paenirhodobacter ferrireducens", "ani": 77.4511, "matched_fragments": 143, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paenirhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.45", "min_intra_species_ani": "95.14", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000021865.1", "gtdb_species": "s__Rhodobacter capsulatus_B", "ani": 77.416, "matched_fragments": 125, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.13", "min_intra_species_ani": "98.02", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.92", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_900156655.1", "gtdb_species": "s__Rhodobacter aestuarii", "ani": 77.2232, "matched_fragments": 112, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.72", "min_intra_species_ani": "97.43", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004022215.1", "gtdb_species": "s__Paenirhodobacter populi", "ani": 77.2085, "matched_fragments": 112, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paenirhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.06", "min_intra_species_ani": "96.55", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.79", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000740785.1", "gtdb_species": "s__Paenirhodobacter enshiensis", "ani": 77.0542, "matched_fragments": 96, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paenirhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002842855.1", "gtdb_species": "s__Phaeovulum sp002842855", "ani": 76.695, "matched_fragments": 77, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeovulum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002421605.1", "gtdb_species": "s__Phaeovulum sp002421605", "ani": 76.6013, "matched_fragments": 65, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeovulum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900172375.1", "gtdb_species": "s__Aquimixticola soesokkakensis", "ani": 76.3197, "matched_fragments": 81, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aquimixticola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004153385.1", "gtdb_species": "s__Thioclava sp004153385", "ani": 76.2774, "matched_fragments": 77, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014681765.1", "gtdb_species": "s__Roseicitreum antarcticum", "ani": 76.1194, "matched_fragments": 60, "total_fragments": 414, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" } ] }