{ "tc_result": [ { "organism_name": "Protaetiibacter intestinalis", "strain": "strain=2DFWR-13", "accession": "GCA_003627075.1", "taxid": 2419774, "species_taxid": 2419774, "relation_to_type": "type", "validated": true, "ani": 79.909, "matched_fragments": 207, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Protaetiibacter larvae", "strain": "strain=KACC 19322", "accession": "GCA_008365275.1", "taxid": 2592654, "species_taxid": 2592654, "relation_to_type": "type", "validated": true, "ani": 79.615, "matched_fragments": 174, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseoglobus frigidaquae", "strain": "strain=DSM 23889", "accession": "GCA_014200395.1", "taxid": 424758, "species_taxid": 424758, "relation_to_type": "type", "validated": true, "ani": 78.8055, "matched_fragments": 143, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chryseoglobus frigidaquae", "strain": "strain=DSM 23889", "accession": "GCA_009664385.2", "taxid": 424758, "species_taxid": 424758, "relation_to_type": "type", "validated": true, "ani": 78.7708, "matched_fragments": 144, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Galbitalea soli", "strain": "strain=DSM 105515", "accession": "GCA_013410525.1", "taxid": 1268042, "species_taxid": 1268042, "relation_to_type": "type", "validated": true, "ani": 78.2387, "matched_fragments": 129, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Galbitalea soli", "strain": "strain=NBRC 108727", "accession": "GCA_010686725.1", "taxid": 1268042, "species_taxid": 1268042, "relation_to_type": "type", "validated": true, "ani": 78.2092, "matched_fragments": 130, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conyzicola lurida", "strain": "strain=DSM 105784", "accession": "GCA_014204935.1", "taxid": 1172621, "species_taxid": 1172621, "relation_to_type": "type", "validated": true, "ani": 78.1652, "matched_fragments": 150, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 78.156, "matched_fragments": 162, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces luteolus", "strain": "strain=JCM 11431", "accession": "GCA_009729855.1", "taxid": 88373, "species_taxid": 88373, "relation_to_type": "type", "validated": true, "ani": 78.0817, "matched_fragments": 164, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conyzicola nivalis", "strain": "strain=CGMCC 1.12813", "accession": "GCA_014639655.1", "taxid": 1477021, "species_taxid": 1477021, "relation_to_type": "type", "validated": true, "ani": 77.9577, "matched_fragments": 140, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter californiensis", "strain": "strain=CFBP 8216", "accession": "GCA_003576155.1", "taxid": 1401995, "species_taxid": 1401995, "relation_to_type": "type", "validated": true, "ani": 77.9388, "matched_fragments": 105, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter zhangzhiyongii", "strain": "strain=DM1", "accession": "GCA_014775655.1", "taxid": 2768071, "species_taxid": 2768071, "relation_to_type": "type", "validated": true, "ani": 77.7924, "matched_fragments": 141, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter californiensis", "strain": "strain=CFBP 8216", "accession": "GCA_021952865.1", "taxid": 1401995, "species_taxid": 1401995, "relation_to_type": "type", "validated": true, "ani": 77.739, "matched_fragments": 127, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter phaseoli", "strain": "strain=LPPA 982", "accession": "GCA_021922925.1", "taxid": 1734031, "species_taxid": 1734031, "relation_to_type": "type", "validated": true, "ani": 77.7348, "matched_fragments": 135, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis subsp. tessellarius", "strain": "strain=ATCC 33566", "accession": "GCA_002240635.1", "taxid": 31965, "species_taxid": 28447, "relation_to_type": "type", "validated": true, "ani": 77.7335, "matched_fragments": 147, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microterricola viridarii", "strain": "strain=DSM 21772", "accession": "GCA_900104895.1", "taxid": 412690, "species_taxid": 412690, "relation_to_type": "type", "validated": true, "ani": 77.6918, "matched_fragments": 132, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium trichothecenolyticum", "strain": "strain=DSM 8608", "accession": "GCA_000956465.1", "taxid": 69370, "species_taxid": 69370, "relation_to_type": "type", "validated": true, "ani": 77.595, "matched_fragments": 129, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hibisci", "strain": "strain=CCTCC AB 2016180", "accession": "GCA_015278255.1", "taxid": 2036000, "species_taxid": 2036000, "relation_to_type": "type", "validated": true, "ani": 77.5362, "matched_fragments": 131, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=K-1", "accession": "GCA_008017435.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 77.4525, "matched_fragments": 118, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ureisolvens", "strain": "strain=CFH S00084", "accession": "GCA_015278315.1", "taxid": 2781186, "species_taxid": 2781186, "relation_to_type": "type", "validated": true, "ani": 77.4266, "matched_fragments": 145, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saccharophilum", "strain": "strain=NBRC 108778", "accession": "GCA_007992455.1", "taxid": 1213358, "species_taxid": 1213358, "relation_to_type": "type", "validated": true, "ani": 77.4035, "matched_fragments": 120, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus sediminis", "strain": "strain=NS18", "accession": "GCA_007923295.1", "taxid": 2599924, "species_taxid": 2599924, "relation_to_type": "type", "validated": true, "ani": 77.3783, "matched_fragments": 140, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus jenensis", "strain": "strain=DSM 9580", "accession": "GCA_003752465.1", "taxid": 46353, "species_taxid": 46353, "relation_to_type": "type", "validated": true, "ani": 77.3182, "matched_fragments": 144, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marisediminicola antarctica", "strain": "strain=ZS314", "accession": "GCA_009930795.1", "taxid": 674079, "species_taxid": 674079, "relation_to_type": "type", "validated": true, "ani": 77.2561, "matched_fragments": 122, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium flavum", "strain": "strain=DSM 18909", "accession": "GCA_018717645.1", "taxid": 415216, "species_taxid": 415216, "relation_to_type": "type", "validated": true, "ani": 77.0, "matched_fragments": 114, "total_fragments": 334, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 69.03, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014653215.1", "gtdb_species": "s__Pseudolysinimonas yzui", "ani": 84.5635, "matched_fragments": 255, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pseudolysinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003852775.1", "gtdb_species": "s__Protaetiibacter sp003852775", "ani": 80.2174, "matched_fragments": 186, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014483895.1", "gtdb_species": "s__Protaetiibacter sp014483895", "ani": 80.0164, "matched_fragments": 201, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003627075.1", "gtdb_species": "s__Protaetiibacter intestinalis", "ani": 79.9871, "matched_fragments": 204, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017308515.1", "gtdb_species": "s__Pseudolysinimonas sp017308515", "ani": 79.8275, "matched_fragments": 200, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pseudolysinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001898835.1", "gtdb_species": "s__Protaetiibacter sp001898835", "ani": 79.7611, "matched_fragments": 188, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008365275.1", "gtdb_species": "s__Protaetiibacter larvae", "ani": 79.615, "matched_fragments": 174, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004216815.1", "gtdb_species": "s__Protaetiibacter sp004216815", "ani": 79.6148, "matched_fragments": 174, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Protaetiibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905479755.1", "gtdb_species": "s__Pseudolysinimonas sp905479755", "ani": 79.3409, "matched_fragments": 156, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pseudolysinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002325245.1", "gtdb_species": "s__Pseudolysinimonas sp002325245", "ani": 79.3277, "matched_fragments": 159, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Pseudolysinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.78", "min_intra_species_ani": "99.17", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.89", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_014595885.1", "gtdb_species": "s__Yonghaparkia alkaliphila_A", "ani": 78.9507, "matched_fragments": 161, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Yonghaparkia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_012530535.1", "gtdb_species": "s__Yonghaparkia sp012530535", "ani": 78.7374, "matched_fragments": 172, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Yonghaparkia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009371975.2", "gtdb_species": "s__Marinisubtilis pacificus", "ani": 78.4119, "matched_fragments": 143, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Marinisubtilis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.81", "min_intra_species_ani": "97.81", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_005502445.1", "gtdb_species": "s__Yonghaparkia sp005502445", "ani": 78.3307, "matched_fragments": 143, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Yonghaparkia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000355695.1", "gtdb_species": "s__Clavibacter nebraskensis", "ani": 77.8824, "matched_fragments": 126, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.1408, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.95", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_015351075.1", "gtdb_species": "s__Clavibacter sp015351075", "ani": 77.7247, "matched_fragments": 137, "total_fragments": 334, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }