{ "tc_result": [ { "organism_name": "Cognatishimia activa", "strain": "strain=CECT 5113", "accession": "GCA_001458335.1", "taxid": 1715691, "species_taxid": 1715691, "relation_to_type": "type", "validated": true, "ani": 77.99, "matched_fragments": 217, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cognatishimia maritima", "strain": "strain=DSM 28223", "accession": "GCA_900129685.1", "taxid": 870908, "species_taxid": 870908, "relation_to_type": "type", "validated": true, "ani": 77.8654, "matched_fragments": 251, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tritonibacter multivorans", "strain": "strain=DSM 26470", "accession": "GCA_900112515.1", "taxid": 928856, "species_taxid": 928856, "relation_to_type": "type", "validated": true, "ani": 77.7058, "matched_fragments": 204, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tritonibacter multivorans", "strain": "strain=CECT 7557", "accession": "GCA_001458415.1", "taxid": 928856, "species_taxid": 928856, "relation_to_type": "type", "validated": true, "ani": 77.6149, "matched_fragments": 207, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia marina", "strain": "strain=CECT 7688", "accession": "GCA_001458175.1", "taxid": 321267, "species_taxid": 321267, "relation_to_type": "type", "validated": true, "ani": 77.4853, "matched_fragments": 197, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia marina", "strain": "strain=DSM 26895", "accession": "GCA_900112745.1", "taxid": 321267, "species_taxid": 321267, "relation_to_type": "type", "validated": true, "ani": 77.4184, "matched_fragments": 198, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia haliotis", "strain": "strain=DSM 28453", "accession": "GCA_900114415.1", "taxid": 1280847, "species_taxid": 1280847, "relation_to_type": "type", "validated": true, "ani": 77.158, "matched_fragments": 216, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia thalassica", "strain": "strain=CECT 7735", "accession": "GCA_001458215.1", "taxid": 1715693, "species_taxid": 1715693, "relation_to_type": "type", "validated": true, "ani": 77.0644, "matched_fragments": 180, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobius mangrovi", "strain": "strain=GS-10", "accession": "GCA_009857745.1", "taxid": 2692236, "species_taxid": 2692236, "relation_to_type": "type", "validated": true, "ani": 76.9578, "matched_fragments": 181, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Donghicola tyrosinivorans", "strain": "strain=DSM 100212", "accession": "GCA_003003355.1", "taxid": 1652492, "species_taxid": 1652492, "relation_to_type": "type", "validated": true, "ani": 76.9397, "matched_fragments": 149, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Falsiruegeria mediterranea", "strain": "strain=CECT 7615", "accession": "GCA_900302455.1", "taxid": 1280832, "species_taxid": 1280832, "relation_to_type": "type", "validated": true, "ani": 76.7498, "matched_fragments": 192, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phaeobacter piscinae", "strain": "strain=P14", "accession": "GCA_002407245.1", "taxid": 1580596, "species_taxid": 1580596, "relation_to_type": "type", "validated": true, "ani": 76.709, "matched_fragments": 178, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Celeribacter litoreus", "strain": "strain=ASW11-22", "accession": "GCA_020165855.1", "taxid": 2876714, "species_taxid": 2876714, "relation_to_type": "type", "validated": true, "ani": 76.6965, "matched_fragments": 94, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tritonibacter mobilis", "strain": "strain=NBRC101030", "accession": "GCA_001681715.1", "taxid": 379347, "species_taxid": 379347, "relation_to_type": "type", "validated": true, "ani": 76.6918, "matched_fragments": 177, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tritonibacter mobilis", "strain": "strain=DSM 23403", "accession": "GCA_900106635.1", "taxid": 379347, "species_taxid": 379347, "relation_to_type": "type", "validated": true, "ani": 76.6685, "matched_fragments": 181, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia abyssi", "strain": "strain=DSM 100673", "accession": "GCA_003014475.1", "taxid": 1662395, "species_taxid": 1662395, "relation_to_type": "type", "validated": true, "ani": 76.6628, "matched_fragments": 152, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter indolifex", "strain": "strain=DSM 14862", "accession": "GCA_022788655.1", "taxid": 225422, "species_taxid": 225422, "relation_to_type": "type", "validated": true, "ani": 76.6502, "matched_fragments": 126, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudophaeobacter flagellatus", "strain": "strain=MA21411-1", "accession": "GCA_021228235.1", "taxid": 2899119, "species_taxid": 2899119, "relation_to_type": "type", "validated": true, "ani": 76.5891, "matched_fragments": 129, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobius aquimarinus", "strain": "strain=KMM 8518", "accession": "GCA_018219815.1", "taxid": 2785917, "species_taxid": 2785917, "relation_to_type": "type", "validated": true, "ani": 76.5538, "matched_fragments": 149, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leisingera caerulea", "strain": "strain=DSM 24564", "accession": "GCA_000473325.1", "taxid": 506591, "species_taxid": 506591, "relation_to_type": "type", "validated": true, "ani": 76.5424, "matched_fragments": 179, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zongyanglinia marina", "strain": "strain=DSW4-44", "accession": "GCA_005771405.1", "taxid": 2578117, "species_taxid": 2578117, "relation_to_type": "type", "validated": true, "ani": 76.4584, "matched_fragments": 109, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zongyanglinia huanghaiensis", "strain": "strain=CY05", "accession": "GCA_009753675.1", "taxid": 2682100, "species_taxid": 2682100, "relation_to_type": "type", "validated": true, "ani": 76.3732, "matched_fragments": 102, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=DSM 26894", "accession": "GCA_900116195.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1233, "matched_fragments": 115, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger pallidus", "strain": "strain=CGMCC 1.15762", "accession": "GCA_014643635.1", "taxid": 1775170, "species_taxid": 1775170, "relation_to_type": "type", "validated": true, "ani": 76.0799, "matched_fragments": 94, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibacterium elongatum", "strain": "strain=DFL-43", "accession": "GCA_000590925.1", "taxid": 159346, "species_taxid": 159346, "relation_to_type": "type", "validated": true, "ani": 76.0685, "matched_fragments": 91, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, "species_taxid": 2081710, "relation_to_type": "type", "validated": true, "ani": 76.0154, "matched_fragments": 103, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola antarcticus", "strain": "strain=Ar-45", "accession": "GCA_002786285.1", "taxid": 1247613, "species_taxid": 1247613, "relation_to_type": "type", "validated": true, "ani": 75.947, "matched_fragments": 111, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola antarcticus", "strain": "strain=CGMCC 1.12662", "accession": "GCA_900215355.1", "taxid": 1247613, "species_taxid": 1247613, "relation_to_type": "type", "validated": true, "ani": 75.9342, "matched_fragments": 112, "total_fragments": 853, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 63.49, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_013215215.1", "gtdb_species": "s__Cognatishimia sp013215215", "ani": 81.0874, "matched_fragments": 509, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cognatishimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017798205.1", "gtdb_species": "s__Cognatishimia activa_A", "ani": 81.0297, "matched_fragments": 545, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cognatishimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001458335.1", "gtdb_species": "s__Cognatishimia activa", "ani": 77.99, "matched_fragments": 217, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cognatishimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900129685.1", "gtdb_species": "s__Cognatishimia maritima", "ani": 77.8654, "matched_fragments": 251, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cognatishimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001458175.1", "gtdb_species": "s__Shimia marina", "ani": 77.4706, "matched_fragments": 198, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.13", "min_intra_species_ani": "96.28", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_017744095.1", "gtdb_species": "s__Shimia sp017744095", "ani": 77.4418, "matched_fragments": 218, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900114635.1", "gtdb_species": "s__Shimia aestuarii", "ani": 77.2621, "matched_fragments": 195, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009496005.1", "gtdb_species": "s__Epibacterium litoralis", "ani": 77.119, "matched_fragments": 137, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Epibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009857745.1", "gtdb_species": "s__Thalassobius mangrovi", "ani": 76.9448, "matched_fragments": 182, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900172225.1", "gtdb_species": "s__Ruegeria_E litorea", "ani": 76.8961, "matched_fragments": 196, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016888515.1", "gtdb_species": "s__Shimia_A biformata", "ani": 76.889, "matched_fragments": 203, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018678075.1", "gtdb_species": "s__Epibacterium ulvae_A", "ani": 76.7763, "matched_fragments": 151, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Epibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000203975.2", "gtdb_species": "s__Leisingera sp000203975", "ani": 76.7632, "matched_fragments": 185, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.92", "min_intra_species_ani": "98.17", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.94", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_900302455.1", "gtdb_species": "s__Ruegeria_E mediterranea", "ani": 76.7509, "matched_fragments": 191, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.84", "min_intra_species_ani": "99.84", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000152625.1", "gtdb_species": "s__Roseovarius nubinhibens", "ani": 76.7011, "matched_fragments": 147, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.78", "min_intra_species_ani": "96.50", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.84", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001681715.1", "gtdb_species": "s__Epibacterium mobile", "ani": 76.6918, "matched_fragments": 177, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Epibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.01", "min_intra_species_ani": "96.41", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 56, "status": "-" }, { "accession": "GCF_018219815.1", "gtdb_species": "s__Thalassobius aquimarinus", "ani": 76.5452, "matched_fragments": 151, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000473325.1", "gtdb_species": "s__Leisingera caerulea", "ani": 76.5424, "matched_fragments": 179, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000813965.1", "gtdb_species": "s__Leisingera sp000813965", "ani": 76.5339, "matched_fragments": 169, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004123675.1", "gtdb_species": "s__Leisingera sp004123675", "ani": 76.5332, "matched_fragments": 177, "total_fragments": 853, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.03", "min_intra_species_ani": "97.97", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }