{ "tc_result": [ { "organism_name": "Roseovarius gaetbuli", "strain": "strain=CECT 8370", "accession": "GCA_900172365.1", "taxid": 1356575, "species_taxid": 1356575, "relation_to_type": "type", "validated": true, "ani": 76.6635, "matched_fragments": 79, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius lutimaris", "strain": "strain=DSM 28463", "accession": "GCA_900115165.1", "taxid": 1005928, "species_taxid": 1005928, "relation_to_type": "type", "validated": true, "ani": 76.6441, "matched_fragments": 70, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius marisflavi", "strain": "strain=DSM 29327", "accession": "GCA_900142625.1", "taxid": 1054996, "species_taxid": 1054996, "relation_to_type": "type", "validated": true, "ani": 76.6063, "matched_fragments": 80, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudosulfitobacter pseudonitzschiae", "strain": "strain=H3", "accession": "GCA_000712315.1", "taxid": 1402135, "species_taxid": 1402135, "relation_to_type": "type", "validated": true, "ani": 76.5274, "matched_fragments": 57, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudosulfitobacter pseudonitzschiae", "strain": "strain=DSM 26824", "accession": "GCA_900129395.1", "taxid": 1402135, "species_taxid": 1402135, "relation_to_type": "type", "validated": true, "ani": 76.4983, "matched_fragments": 58, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Antarcticimicrobium luteum", "strain": "strain=318-1", "accession": "GCA_004358185.1", "taxid": 2547397, "species_taxid": 2547397, "relation_to_type": "type", "validated": true, "ani": 76.4866, "matched_fragments": 64, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria atlantica", "strain": "strain=CECT 4292", "accession": "GCA_001458195.1", "taxid": 81569, "species_taxid": 81569, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4696, "matched_fragments": 55, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobius mediterraneus", "strain": "strain=CECT 5383", "accession": "GCA_001458435.1", "taxid": 340021, "species_taxid": 340021, "relation_to_type": "type", "validated": true, "ani": 76.4276, "matched_fragments": 53, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobius mediterraneus", "strain": "strain=DSM 16398", "accession": "GCA_900156595.1", "taxid": 340021, "species_taxid": 340021, "relation_to_type": "type", "validated": true, "ani": 76.3855, "matched_fragments": 51, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagimonas varians", "strain": "strain=DSM 23678", "accession": "GCA_003208435.1", "taxid": 696760, "species_taxid": 696760, "relation_to_type": "type", "validated": true, "ani": 76.3465, "matched_fragments": 56, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudophaeobacter flagellatus", "strain": "strain=MA21411-1", "accession": "GCA_021228235.1", "taxid": 2899119, "species_taxid": 2899119, "relation_to_type": "type", "validated": true, "ani": 76.2751, "matched_fragments": 82, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Profundibacter amoris", "strain": "strain=BAR1", "accession": "GCA_003544895.1", "taxid": 2171755, "species_taxid": 2171755, "relation_to_type": "type", "validated": true, "ani": 76.2475, "matched_fragments": 53, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius albus", "strain": "strain=CECT 7450", "accession": "GCA_900172335.1", "taxid": 1247867, "species_taxid": 1247867, "relation_to_type": "type", "validated": true, "ani": 76.2412, "matched_fragments": 59, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodonghicola xiamenensis", "strain": "strain=DSM 18339", "accession": "GCA_000429365.1", "taxid": 337702, "species_taxid": 337702, "relation_to_type": "type", "validated": true, "ani": 76.2305, "matched_fragments": 55, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoprimorskyibacter insulae", "strain": "strain=CECT 8871", "accession": "GCA_900302505.1", "taxid": 1695997, "species_taxid": 1695997, "relation_to_type": "type", "validated": true, "ani": 76.1895, "matched_fragments": 69, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria pomeroyi", "strain": "strain=DSS-3", "accession": "GCA_000011965.2", "taxid": 89184, "species_taxid": 89184, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1543, "matched_fragments": 73, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudodonghicola xiamenensis", "strain": "strain=CGMCC 1.7081", "accession": "GCA_014653505.1", "taxid": 337702, "species_taxid": 337702, "relation_to_type": "type", "validated": true, "ani": 76.1527, "matched_fragments": 55, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shimia gijangensis", "strain": "strain=DSM 100564", "accession": "GCA_900142085.1", "taxid": 1470563, "species_taxid": 1470563, "relation_to_type": "type", "validated": true, "ani": 76.0982, "matched_fragments": 53, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius gahaiensis", "strain": "strain=GH877", "accession": "GCA_011601345.1", "taxid": 2716691, "species_taxid": 2716691, "relation_to_type": "type", "validated": true, "ani": 76.0761, "matched_fragments": 72, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leisingera caerulea", "strain": "strain=DSM 24564", "accession": "GCA_000473325.1", "taxid": 506591, "species_taxid": 506591, "relation_to_type": "type", "validated": true, "ani": 75.9838, "matched_fragments": 57, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudophaeobacter arcticus", "strain": "strain=DSM 23566", "accession": "GCA_000473205.1", "taxid": 385492, "species_taxid": 385492, "relation_to_type": "type", "validated": true, "ani": 75.9772, "matched_fragments": 64, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phaeobacter inhibens", "strain": "strain=DSM 16374", "accession": "GCA_000473105.1", "taxid": 221822, "species_taxid": 221822, "relation_to_type": "type", "validated": true, "ani": 75.9438, "matched_fragments": 55, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudophaeobacter leonis", "strain": "strain=306", "accession": "GCA_002087335.1", "taxid": 1144477, "species_taxid": 1144477, "relation_to_type": "type", "validated": true, "ani": 75.8767, "matched_fragments": 63, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phaeobacter porticola", "strain": "strain=P97", "accession": "GCA_001888185.1", "taxid": 1844006, "species_taxid": 1844006, "relation_to_type": "type", "validated": true, "ani": 75.859, "matched_fragments": 61, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter fulva", "strain": "strain=con5", "accession": "GCA_018798885.1", "taxid": 2840474, "species_taxid": 2840474, "relation_to_type": "type", "validated": true, "ani": 75.5971, "matched_fragments": 54, "total_fragments": 800, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_902512685.1", "gtdb_species": "s__CABZJG01 sp902512685", "ani": 97.7772, "matched_fragments": 456, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__CABZJG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.75", "min_intra_species_ani": "97.42", "mean_intra_species_af": "0.59", "min_intra_species_af": "0.54", "num_clustered_genomes": 7, "status": "conclusive" }, { "accession": "GCA_902525995.1", "gtdb_species": "s__CABZJG01 sp902525995", "ani": 86.065, "matched_fragments": 304, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__CABZJG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002726375.1", "gtdb_species": "s__CABZJG01 sp002726375", "ani": 85.8505, "matched_fragments": 425, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__CABZJG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.70", "min_intra_species_ani": "96.98", "mean_intra_species_af": "0.64", "min_intra_species_af": "0.64", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_001642945.1", "gtdb_species": "s__LGRT01 sp001642945", "ani": 77.0172, "matched_fragments": 103, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__LGRT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.21", "min_intra_species_ani": "98.81", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.88", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCA_002684375.1", "gtdb_species": "s__CPC320 sp002684375", "ani": 76.7048, "matched_fragments": 65, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__CPC320", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.52", "min_intra_species_ani": "98.26", "mean_intra_species_af": "0.79", "min_intra_species_af": "0.72", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_900115165.1", "gtdb_species": "s__Roseovarius lutimaris", "ani": 76.6409, "matched_fragments": 68, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900327775.1", "gtdb_species": "s__Roseovarius sp900327775", "ani": 76.5775, "matched_fragments": 51, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001458195.1", "gtdb_species": "s__Ruegeria atlantica", "ani": 76.4696, "matched_fragments": 55, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.59", "min_intra_species_ani": "95.51", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.83", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_001510135.1", "gtdb_species": "s__LFER01 sp001510135", "ani": 76.3191, "matched_fragments": 71, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__LFER01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "96.26", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.78", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_000429365.1", "gtdb_species": "s__Pseudodonghicola xiamenensis", "ani": 76.2305, "matched_fragments": 55, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudodonghicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900172335.1", "gtdb_species": "s__Roseovarius albus", "ani": 76.23, "matched_fragments": 58, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000814005.1", "gtdb_species": "s__Ruegeria sp000814005", "ani": 76.1608, "matched_fragments": 51, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900302505.1", "gtdb_species": "s__Pseudoprimorskyibacter insulae", "ani": 76.1531, "matched_fragments": 68, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoprimorskyibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013032505.1", "gtdb_species": "s__Ruegeria atlantica_F", "ani": 76.1403, "matched_fragments": 56, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013032025.1", "gtdb_species": "s__Ruegeria atlantica_C", "ani": 76.0901, "matched_fragments": 50, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002222635.1", "gtdb_species": "s__Ascidiaceihabitans pseudonitzschiae_A", "ani": 76.0781, "matched_fragments": 65, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ascidiaceihabitans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.92", "min_intra_species_ani": "99.92", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900142085.1", "gtdb_species": "s__Shimia gijangensis", "ani": 76.0488, "matched_fragments": 52, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000473205.1", "gtdb_species": "s__Pseudophaeobacter arcticus", "ani": 75.9346, "matched_fragments": 63, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudophaeobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002087335.1", "gtdb_species": "s__Pseudophaeobacter leonis", "ani": 75.8318, "matched_fragments": 62, "total_fragments": 800, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudophaeobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }