{ "tc_result": [ { "organism_name": "Candidatus Mycolicibacterium alkanivorans", "strain": "", "accession": "GCA_022760805.1", "taxid": 2954114, "species_taxid": 2954114, "relation_to_type": "type", "validated": true, "ani": 79.1386, "matched_fragments": 497, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium anyangense", "strain": "strain=JCM 30275", "accession": "GCA_010731855.1", "taxid": 1431246, "species_taxid": 1431246, "relation_to_type": "type", "validated": true, "ani": 78.9398, "matched_fragments": 537, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium pallens", "strain": "strain=JCM 16370", "accession": "GCA_019456675.1", "taxid": 370524, "species_taxid": 370524, "relation_to_type": "type", "validated": true, "ani": 78.7379, "matched_fragments": 516, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium crocinum", "strain": "strain=JCM 16369", "accession": "GCA_022370635.3", "taxid": 388459, "species_taxid": 388459, "relation_to_type": "type", "validated": true, "ani": 78.7091, "matched_fragments": 535, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium vinylchloridicum", "strain": "strain=CECT 8761", "accession": "GCA_013404075.1", "taxid": 2736928, "species_taxid": 2736928, "relation_to_type": "type", "validated": true, "ani": 78.6783, "matched_fragments": 516, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=DSM 44179", "accession": "GCA_002101995.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 78.6068, "matched_fragments": 422, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fallax", "strain": "strain=JCM 6405", "accession": "GCA_010726955.1", "taxid": 1793, "species_taxid": 1793, "relation_to_type": "type", "validated": true, "ani": 78.5938, "matched_fragments": 429, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium palauense", "strain": "strain=CECT 8779", "accession": "GCA_002592005.1", "taxid": 2034511, "species_taxid": 2034511, "relation_to_type": "type", "validated": true, "ani": 78.4898, "matched_fragments": 463, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium helvum", "strain": "strain=JCM 30396", "accession": "GCA_010731895.1", "taxid": 1534349, "species_taxid": 1534349, "relation_to_type": "type", "validated": true, "ani": 78.4525, "matched_fragments": 509, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium aromaticivorans", "strain": "strain=JS19b1", "accession": "GCA_000559085.2", "taxid": 318425, "species_taxid": 318425, "relation_to_type": "type", "validated": true, "ani": 78.4469, "matched_fragments": 523, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium canariasense", "strain": "strain=JCM15298", "accession": "GCA_001570445.1", "taxid": 228230, "species_taxid": 228230, "relation_to_type": "type", "validated": true, "ani": 78.2821, "matched_fragments": 427, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium canariasense", "strain": "strain=CCUG 47953", "accession": "GCA_002101555.1", "taxid": 228230, "species_taxid": 228230, "relation_to_type": "type", "validated": true, "ani": 78.2699, "matched_fragments": 419, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=NCTC10409", "accession": "GCA_900187065.1", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.1183, "matched_fragments": 423, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=ATCC 19527", "accession": "GCA_000234585.2", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.1137, "matched_fragments": 429, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium thermoresistibile", "strain": "strain=JCM6362", "accession": "GCA_001570505.1", "taxid": 1797, "species_taxid": 1797, "relation_to_type": "type", "validated": true, "ani": 78.095, "matched_fragments": 425, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium sarraceniae", "strain": "strain=JCM 30395", "accession": "GCA_010731875.1", "taxid": 1534348, "species_taxid": 1534348, "relation_to_type": "type", "validated": true, "ani": 78.0717, "matched_fragments": 466, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium arosiense", "strain": "strain=DSM 45069", "accession": "GCA_002086125.1", "taxid": 425468, "species_taxid": 425468, "relation_to_type": "type", "validated": true, "ani": 77.9451, "matched_fragments": 368, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium arabiense", "strain": "strain=JCM 18538", "accession": "GCA_010731815.2", "taxid": 1286181, "species_taxid": 1286181, "relation_to_type": "type", "validated": true, "ani": 77.9412, "matched_fragments": 410, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium pulveris", "strain": "strain=JCM 6370", "accession": "GCA_010725725.1", "taxid": 36813, "species_taxid": 36813, "relation_to_type": "type", "validated": true, "ani": 77.9372, "matched_fragments": 414, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium boenickei", "strain": "strain=JCM 15653", "accession": "GCA_010731295.1", "taxid": 146017, "species_taxid": 146017, "relation_to_type": "type", "validated": true, "ani": 77.9194, "matched_fragments": 428, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium malmesburyense", "strain": "strain=WCM 7299", "accession": "GCA_001050015.1", "taxid": 1566886, "species_taxid": 1566886, "relation_to_type": "type", "validated": true, "ani": 77.9175, "matched_fragments": 390, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium lacusdiani", "strain": "strain=JXJ CY 35", "accession": "GCA_021916785.1", "taxid": 2895283, "species_taxid": 2895283, "relation_to_type": "type", "validated": true, "ani": 77.912, "matched_fragments": 413, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium llatzerense", "strain": "strain=MG13", "accession": "GCA_025331195.1", "taxid": 280871, "species_taxid": 280871, "relation_to_type": "type", "validated": true, "ani": 77.8221, "matched_fragments": 386, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium saskatchewanense", "strain": "strain=DSM 44616", "accession": "GCA_002101875.1", "taxid": 220927, "species_taxid": 220927, "relation_to_type": "type", "validated": true, "ani": 77.8058, "matched_fragments": 372, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium saskatchewanense", "strain": "strain=JCM 13016", "accession": "GCA_010729105.1", "taxid": 220927, "species_taxid": 220927, "relation_to_type": "type", "validated": true, "ani": 77.8015, "matched_fragments": 383, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycobacterium noviomagense", "strain": "strain=DSM 45145", "accession": "GCA_002086415.1", "taxid": 459858, "species_taxid": 459858, "relation_to_type": "type", "validated": true, "ani": 77.603, "matched_fragments": 327, "total_fragments": 989, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 97.22, "contamination": 2.08, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_018401645.1", "gtdb_species": "s__Mycobacterium sp018401645", "ani": 98.5426, "matched_fragments": 804, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { 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"gtdb_species": "s__Mycobacterium sp016462945", "ani": 81.0073, "matched_fragments": 647, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001510415.1", "gtdb_species": "s__Mycobacterium sp001510415", "ani": 79.9831, "matched_fragments": 361, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017853185.1", "gtdb_species": "s__Mycobacterium sp017853185", "ani": 79.8668, "matched_fragments": 538, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903884065.1", "gtdb_species": "s__Mycobacterium sp903884065", "ani": 79.638, "matched_fragments": 619, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.70", "min_intra_species_ani": "99.70", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903877095.1", "gtdb_species": "s__Mycobacterium sp903877095", "ani": 79.3104, "matched_fragments": 562, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.94", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.96", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_018883075.1", "gtdb_species": "s__Mycobacterium sp018883075", "ani": 79.1579, "matched_fragments": 442, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903862565.1", "gtdb_species": "s__Mycobacterium sp903862565", "ani": 79.0105, "matched_fragments": 520, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002723835.1", "gtdb_species": "s__Mycobacterium sp002723835", "ani": 78.8411, "matched_fragments": 561, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004745805.1", "gtdb_species": "s__Mycobacterium sp004745805", "ani": 78.8406, "matched_fragments": 528, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018882545.1", "gtdb_species": "s__Mycobacterium sp018882545", "ani": 78.7014, "matched_fragments": 343, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001886515.1", "gtdb_species": "s__Mycobacterium sp001886515", "ani": 78.6973, "matched_fragments": 513, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.54", "min_intra_species_ani": "98.54", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_900078375.1", "gtdb_species": "s__Mycobacterium sp900078375", "ani": 78.4935, "matched_fragments": 517, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018455725.1", "gtdb_species": "s__Mycobacterium sp018455725", "ani": 78.3407, "matched_fragments": 393, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002101555.1", "gtdb_species": "s__Mycobacterium canariasense", "ani": 78.287, "matched_fragments": 417, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008329565.1", "gtdb_species": "s__Mycobacterium sp008329565", "ani": 78.2569, "matched_fragments": 493, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001722335.1", "gtdb_species": "s__Mycobacterium flavescens_A", "ani": 78.2218, "matched_fragments": 439, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900187065.1", "gtdb_species": "s__Mycobacterium thermoresistibile", "ani": 78.1239, "matched_fragments": 423, "total_fragments": 989, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.97", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" } ] }