{ "tc_result": [ { "organism_name": "Roseobacter cerasinus", "strain": "strain=AI77", "accession": "GCA_009811755.1", "taxid": 2602289, "species_taxid": 2602289, "relation_to_type": "type", "validated": true, "ani": 77.2305, "matched_fragments": 181, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseobacter denitrificans", "strain": "strain=OCh 114", "accession": "GCA_000014045.1", "taxid": 2434, "species_taxid": 2434, "relation_to_type": "type", "validated": true, "ani": 77.0605, "matched_fragments": 211, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseobacter denitrificans", "strain": "strain=DSM 7001", "accession": "GCA_900113215.1", "taxid": 2434, "species_taxid": 2434, "relation_to_type": "type", "validated": true, "ani": 77.0468, "matched_fragments": 216, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseobacter ponti", "strain": "strain=DSM 106830", "accession": "GCA_012932215.1", "taxid": 1891787, "species_taxid": 1891787, "relation_to_type": "type", "validated": true, "ani": 76.9606, "matched_fragments": 212, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseobacter litoralis", "strain": "strain=Och 149", "accession": "GCA_000154785.2", "taxid": 42443, "species_taxid": 42443, "relation_to_type": "type", "validated": true, "ani": 76.9334, "matched_fragments": 206, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter maritimus", "strain": "strain=S0837", "accession": "GCA_013346665.1", "taxid": 2741719, "species_taxid": 2741719, "relation_to_type": "type", "validated": true, "ani": 76.9198, "matched_fragments": 108, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter delicatus", "strain": "strain=DSM 16477", "accession": "GCA_900102535.1", "taxid": 218672, "species_taxid": 218672, "relation_to_type": "type", "validated": true, "ani": 76.7445, "matched_fragments": 123, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter sabulilitoris", "strain": "strain=HSMS-29", "accession": "GCA_005887615.1", "taxid": 2562655, "species_taxid": 2562655, "relation_to_type": "type", "validated": true, "ani": 76.572, "matched_fragments": 175, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobius aquimarinus", "strain": "strain=KMM 8518", "accession": "GCA_018219815.1", "taxid": 2785917, "species_taxid": 2785917, "relation_to_type": "type", "validated": true, "ani": 76.4404, "matched_fragments": 103, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter geojensis", "strain": "strain=DSM 101063", "accession": "GCA_013407805.1", "taxid": 1342299, "species_taxid": 1342299, "relation_to_type": "type", "validated": true, "ani": 76.3639, "matched_fragments": 115, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nioella sediminis", "strain": "strain=JS7-11", "accession": "GCA_001879695.1", "taxid": 1912092, "species_taxid": 1912092, "relation_to_type": "type", "validated": true, "ani": 76.3294, "matched_fragments": 91, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter indolifex", "strain": "strain=HEL-45", "accession": "GCA_000172095.1", "taxid": 225422, "species_taxid": 225422, "relation_to_type": "type", "validated": true, "ani": 76.3267, "matched_fragments": 120, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter indolifex", "strain": "strain=DSM 14862", "accession": "GCA_022788655.1", "taxid": 225422, "species_taxid": 225422, "relation_to_type": "type", "validated": true, "ani": 76.3247, "matched_fragments": 120, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfitobacter geojensis", "strain": "strain=MM-124", "accession": "GCA_000622325.1", "taxid": 1342299, "species_taxid": 1342299, "relation_to_type": "type", "validated": true, "ani": 76.2956, "matched_fragments": 118, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, "species_taxid": 2081710, "relation_to_type": "type", "validated": true, "ani": 76.1941, "matched_fragments": 97, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allosediminivita pacifica", "strain": "strain=CGMCC 1.12410", "accession": "GCA_014637495.1", "taxid": 1267769, "species_taxid": 1267769, "relation_to_type": "type", "validated": true, "ani": 75.9855, "matched_fragments": 76, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allosediminivita pacifica", "strain": "strain=DSM 29329", "accession": "GCA_003054175.1", "taxid": 1267769, "species_taxid": 1267769, "relation_to_type": "type", "validated": true, "ani": 75.9855, "matched_fragments": 76, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter ovatus", "strain": "strain=JA234", "accession": "GCA_900207575.1", "taxid": 439529, "species_taxid": 439529, "relation_to_type": "type", "validated": true, "ani": 75.9826, "matched_fragments": 63, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria meonggei", "strain": "strain=CECT 8411", "accession": "GCA_900172215.1", "taxid": 1446476, "species_taxid": 1446476, "relation_to_type": "type", "validated": true, "ani": 75.9571, "matched_fragments": 111, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Puniceibacterium sediminis", "strain": "strain=DSM 29052", "accession": "GCA_900188035.1", "taxid": 1608407, "species_taxid": 1608407, "relation_to_type": "type", "validated": true, "ani": 75.9042, "matched_fragments": 95, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhabdonatronobacter sediminivivens", "strain": "strain=IM2376", "accession": "GCA_013415485.1", "taxid": 2743469, "species_taxid": 2743469, "relation_to_type": "type", "validated": true, "ani": 75.8518, "matched_fragments": 54, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tropicimonas isoalkanivorans", "strain": "strain=DSM 19548", "accession": "GCA_900112335.1", "taxid": 441112, "species_taxid": 441112, "relation_to_type": "type", "validated": true, "ani": 75.7723, "matched_fragments": 69, "total_fragments": 1179, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 55.93, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_015644665.1", "gtdb_species": "s__Roseobacter sp015644665", "ani": 77.2569, "matched_fragments": 228, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009811755.1", "gtdb_species": "s__Roseobacter cerasinus", "ani": 77.2305, "matched_fragments": 181, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012932215.1", "gtdb_species": "s__Roseobacter ponti", "ani": 76.9536, "matched_fragments": 211, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000154785.2", "gtdb_species": "s__Roseobacter litoralis", "ani": 76.9347, "matched_fragments": 205, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001969365.1", "gtdb_species": "s__Tateyamaria omphalii_A", "ani": 76.7953, "matched_fragments": 148, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tateyamaria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014337925.1", "gtdb_species": "s__Roseobacter litoralis_A", "ani": 76.7722, "matched_fragments": 164, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900102535.1", "gtdb_species": "s__Sulfitobacter delicatus", "ani": 76.7445, "matched_fragments": 123, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003335585.1", "gtdb_species": "s__Sulfitobacter sp003335585", "ani": 76.7263, "matched_fragments": 187, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003352045.1", "gtdb_species": "s__JL08 sp003352045", "ani": 76.594, "matched_fragments": 148, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__JL08", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005887615.1", "gtdb_species": "s__Sulfitobacter_E sabulilitoris", "ani": 76.572, "matched_fragments": 175, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001886735.1", "gtdb_species": "s__Sulfitobacter alexandrii", "ani": 76.5646, "matched_fragments": 142, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001634885.1", "gtdb_species": "s__Sulfitobacter sp001634885", "ani": 76.5246, "matched_fragments": 139, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.85", "min_intra_species_ani": "95.06", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.78", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_003511785.1", "gtdb_species": "s__UBA7951 sp003511785", "ani": 76.3468, "matched_fragments": 77, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA7951", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000172095.1", "gtdb_species": "s__Sulfitobacter indolifex", "ani": 76.3267, "matched_fragments": 120, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000622325.1", "gtdb_species": "s__Sulfitobacter geojensis", "ani": 76.2956, "matched_fragments": 118, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.34", "min_intra_species_ani": "96.22", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 35, "status": "-" }, { "accession": "GCF_000743705.1", "gtdb_species": "s__Ruegeria halocynthiae_B", "ani": 76.2931, "matched_fragments": 106, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016019955.1", "gtdb_species": "s__Shimia sp016019955", "ani": 76.2424, "matched_fragments": 112, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.56", "min_intra_species_ani": "99.56", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001292625.1", "gtdb_species": "s__Shimia sp001292625", "ani": 76.0042, "matched_fragments": 82, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Shimia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003054175.1", "gtdb_species": "s__Allosediminivita pacifica", "ani": 75.9855, "matched_fragments": 76, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Allosediminivita", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900207575.1", "gtdb_species": "s__Cereibacter_A ovatus", "ani": 75.9826, "matched_fragments": 63, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cereibacter_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017811755.1", "gtdb_species": "s__Pararhodobacter sp017811755", "ani": 75.7925, "matched_fragments": 61, "total_fragments": 1179, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }