{ "tc_result": [ { "organism_name": "Roseovarius mucosus", "strain": "strain=DSM 17069", "accession": "GCA_000768555.3", "taxid": 215743, "species_taxid": 215743, "relation_to_type": "type", "validated": true, "ani": 87.8913, "matched_fragments": 1113, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius azorensis", "strain": "strain=DSM 100674", "accession": "GCA_900109455.1", "taxid": 1287727, "species_taxid": 1287727, "relation_to_type": "type", "validated": true, "ani": 80.6811, "matched_fragments": 697, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius tolerans", "strain": "strain=DSM 11457", "accession": "GCA_900109855.1", "taxid": 74031, "species_taxid": 74031, "relation_to_type": "type", "validated": true, "ani": 80.6095, "matched_fragments": 696, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius lutimaris", "strain": "strain=DSM 28463", "accession": "GCA_900115165.1", "taxid": 1005928, "species_taxid": 1005928, "relation_to_type": "type", "validated": true, "ani": 79.4722, "matched_fragments": 648, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius gaetbuli", "strain": "strain=CECT 8370", "accession": "GCA_900172365.1", "taxid": 1356575, "species_taxid": 1356575, "relation_to_type": "type", "validated": true, "ani": 79.4597, "matched_fragments": 668, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius marisflavi", "strain": "strain=DSM 29327", "accession": "GCA_900142625.1", "taxid": 1054996, "species_taxid": 1054996, "relation_to_type": "type", "validated": true, "ani": 79.4557, "matched_fragments": 642, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius litoreus", "strain": "strain=DSM 28249", "accession": "GCA_900142765.1", "taxid": 1155722, "species_taxid": 1155722, "relation_to_type": "type", "validated": true, "ani": 78.6678, "matched_fragments": 493, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius pacificus", "strain": "strain=DSM 29589", "accession": "GCA_900142665.1", "taxid": 337701, "species_taxid": 337701, "relation_to_type": "type", "validated": true, "ani": 78.3753, "matched_fragments": 473, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius pacificus", "strain": "strain=CGMCC 1.7083", "accession": "GCA_014645335.1", "taxid": 337701, "species_taxid": 337701, "relation_to_type": "type", "validated": true, "ani": 78.3477, "matched_fragments": 480, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagivirga sediminicola", "strain": "strain=BH-SD19", "accession": "GCA_003072125.1", "taxid": 2170575, "species_taxid": 2170575, "relation_to_type": "type", "validated": true, "ani": 77.9259, "matched_fragments": 407, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger marinus", "strain": "strain=DSM 26424", "accession": "GCA_900100085.1", "taxid": 555512, "species_taxid": 555512, "relation_to_type": "type", "validated": true, "ani": 77.7309, "matched_fragments": 383, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marivita lacus", "strain": "strain=CGMCC 1.12478", "accession": "GCA_014637725.1", "taxid": 1323742, "species_taxid": 1323742, "relation_to_type": "type", "validated": true, "ani": 77.6483, "matched_fragments": 346, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum steppense", "strain": "strain=DSM 21153", "accession": "GCA_004339675.1", "taxid": 540251, "species_taxid": 540251, "relation_to_type": "type", "validated": true, "ani": 77.3858, "matched_fragments": 283, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 77.2899, "matched_fragments": 292, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola antarcticus", "strain": "strain=Ar-45", "accession": "GCA_002786285.1", "taxid": 1247613, "species_taxid": 1247613, "relation_to_type": "type", "validated": true, "ani": 77.0104, "matched_fragments": 246, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, "species_taxid": 2081710, "relation_to_type": "type", "validated": true, "ani": 76.9396, "matched_fragments": 256, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudooceanicola onchidii", "strain": "strain=XY-99", "accession": "GCA_004959925.1", "taxid": 2562279, "species_taxid": 2562279, "relation_to_type": "type", "validated": true, "ani": 76.8531, "matched_fragments": 262, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger pallidus", "strain": "strain=CGMCC 1.15762", "accession": "GCA_014643635.1", "taxid": 1775170, "species_taxid": 1775170, "relation_to_type": "type", "validated": true, "ani": 76.7085, "matched_fragments": 232, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudophaeobacter flagellatus", "strain": "strain=MA21411-1", "accession": "GCA_021228235.1", "taxid": 2899119, "species_taxid": 2899119, "relation_to_type": "type", "validated": true, "ani": 76.6772, "matched_fragments": 240, "total_fragments": 1278, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002080415.1", "gtdb_species": "s__Roseovarius mucosus_A", "ani": 98.3388, "matched_fragments": 1243, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.86", "min_intra_species_ani": "96.11", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.79", "num_clustered_genomes": 6, "status": "conclusive" }, { "accession": "GCA_018066915.1", "gtdb_species": "s__Roseovarius sp018066915", "ani": 88.1483, "matched_fragments": 932, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.88", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000768555.3", "gtdb_species": "s__Roseovarius mucosus", "ani": 87.895, "matched_fragments": 1113, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.95", "min_intra_species_ani": "96.93", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000152845.1", "gtdb_species": "s__Roseovarius sp000152845", "ani": 85.7599, "matched_fragments": 1016, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.99", "min_intra_species_ani": "97.99", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000744325.1", "gtdb_species": "s__Roseovarius sp000744325", "ani": 83.6146, "matched_fragments": 925, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900109455.1", "gtdb_species": "s__Roseovarius azorensis", "ani": 80.69, "matched_fragments": 696, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002720475.1", "gtdb_species": "s__Roseovarius sp002720475", "ani": 78.8465, "matched_fragments": 424, "total_fragments": 1278, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.80", "min_intra_species_ani": "99.74", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.71", "num_clustered_genomes": 3, "status": "-" } ] }