{ "tc_result": [ { "organism_name": "Tistlia consotensis", "strain": "strain=USBA 355", "accession": "GCA_900177295.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 76.7963, "matched_fragments": 297, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=DSM 21585", "accession": "GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 76.7428, "matched_fragments": 298, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibius marinus", "strain": "strain=NBU2595", "accession": "GCA_014925385.1", "taxid": 2762760, "species_taxid": 2762760, "relation_to_type": "type", "validated": true, "ani": 76.742, "matched_fragments": 239, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hypericibacter adhaerens", "strain": "strain=R5959", "accession": "GCA_008728835.1", "taxid": 2602016, "species_taxid": 2602016, "relation_to_type": "type", "validated": true, "ani": 76.5962, "matched_fragments": 241, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum picis", "strain": "strain=IMMIB TAR-3", "accession": "GCA_017876115.1", "taxid": 488438, "species_taxid": 488438, "relation_to_type": "type", "validated": true, "ani": 76.5742, "matched_fragments": 200, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella pratensis", "strain": "strain=W17", "accession": "GCA_008843145.1", "taxid": 2233999, "species_taxid": 2233999, "relation_to_type": "type", "validated": true, "ani": 76.5491, "matched_fragments": 178, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum tabaci", "strain": "strain=W712", "accession": "GCA_014596085.1", "taxid": 2752310, "species_taxid": 2752310, "relation_to_type": "type", "validated": true, "ani": 76.5305, "matched_fragments": 202, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum moscoviense", "strain": "strain=BB-1", "accession": "GCA_001650635.1", "taxid": 1437059, "species_taxid": 1437059, "relation_to_type": "type", "validated": true, "ani": 76.4112, "matched_fragments": 138, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum argentinense", "strain": "strain=Az39", "accession": "GCA_000632475.2", "taxid": 2970906, "species_taxid": 2970906, "relation_to_type": "type", "validated": true, "ani": 76.3924, "matched_fragments": 208, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Reyranella aquatilis", "strain": "strain=KCTC 52223", "accession": "GCA_020880995.1", "taxid": 2035356, "species_taxid": 2035356, 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"matched_fragments": 116, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vineibacter terrae", "strain": "strain=CC-CFT640", "accession": "GCA_008039615.1", "taxid": 2586908, "species_taxid": 2586908, "relation_to_type": "type", "validated": true, "ani": 76.3053, "matched_fragments": 234, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marivibrio halodurans", "strain": "strain=CGMCC 1.15697", "accession": "GCA_017963645.1", "taxid": 2039722, "species_taxid": 2039722, "relation_to_type": "type", "validated": true, "ani": 76.2779, "matched_fragments": 129, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum caucaseum", "strain": "strain=SO-1", "accession": "GCA_000342045.1", "taxid": 1244869, "species_taxid": 1244869, "relation_to_type": "type", "validated": true, "ani": 76.2764, "matched_fragments": 158, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=CGMCC 1.3455", "accession": "GCA_900100725.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1163, "matched_fragments": 126, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Yangia pacifica", "strain": "strain=DSM 26894", "accession": "GCA_900116195.1", "taxid": 311180, "species_taxid": 311180, "relation_to_type": "suspected-type", "validated": true, "ani": 76.0913, "matched_fragments": 129, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methyloceanibacter superfactus", "strain": "strain=R-67175", "accession": "GCA_001723305.1", "taxid": 1774969, "species_taxid": 1774969, "relation_to_type": "type", "validated": true, "ani": 76.0641, "matched_fragments": 89, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium cajani", "strain": "strain=1010", "accession": "GCA_009759665.1", "taxid": 1928661, "species_taxid": 1928661, "relation_to_type": "type", "validated": true, "ani": 76.041, "matched_fragments": 156, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas rhizosphaerae", "strain": "strain=YW11", "accession": "GCA_002631185.1", "taxid": 1335062, "species_taxid": 1335062, "relation_to_type": "type", "validated": true, "ani": 76.0161, "matched_fragments": 178, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia oryziradicis", "strain": "strain=G19", "accession": "GCA_016698645.1", "taxid": 2801335, "species_taxid": 2801335, "relation_to_type": "type", "validated": true, "ani": 75.9559, "matched_fragments": 66, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovarius crocodyli", "strain": "strain=CCP-6", "accession": "GCA_004005855.1", "taxid": 1979269, "species_taxid": 1979269, "relation_to_type": "type", "validated": true, "ani": 75.9391, "matched_fragments": 145, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azorhizobium caulinodans", "strain": "strain=ORS 571", "accession": "GCA_000010525.1", "taxid": 7, "species_taxid": 7, "relation_to_type": "type", "validated": true, "ani": 75.91, "matched_fragments": 136, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oryzihabitans", "strain": "strain=TER-1", "accession": "GCA_004004555.2", "taxid": 2499852, "species_taxid": 2499852, "relation_to_type": "type", "validated": true, "ani": 75.8822, "matched_fragments": 190, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter oligotrophicus", "strain": "strain=29k", "accession": "GCA_008364685.1", "taxid": 2607286, "species_taxid": 2607286, "relation_to_type": "type", "validated": true, "ani": 75.8737, "matched_fragments": 130, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lichenibacterium ramalinae", "strain": "strain=RmlP001", "accession": "GCA_004137085.1", "taxid": 2316527, "species_taxid": 2316527, "relation_to_type": "type", "validated": true, "ani": 75.8538, "matched_fragments": 159, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Elioraea rosea", "strain": "strain=PF-30", "accession": "GCA_007644105.1", "taxid": 2492390, "species_taxid": 2492390, "relation_to_type": "type", "validated": true, "ani": 75.8379, "matched_fragments": 120, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pontivivens ytuae", "strain": "strain=MT2928", "accession": "GCA_015679265.1", "taxid": 2789856, "species_taxid": 2789856, "relation_to_type": "type", "validated": true, "ani": 75.8329, "matched_fragments": 94, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania gaetbuli", "strain": "strain=DSM 16225", "accession": "GCA_009827315.1", "taxid": 266952, "species_taxid": 266952, "relation_to_type": "type", "validated": true, "ani": 75.8239, "matched_fragments": 62, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania proteolytica", "strain": "strain=6B39", "accession": "GCA_019711565.1", "taxid": 2867239, "species_taxid": 2867239, "relation_to_type": "type", "validated": true, "ani": 75.7869, "matched_fragments": 62, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoligotrophos defluvii", "strain": "strain=lm1", "accession": "GCA_005281615.1", "taxid": 2561934, "species_taxid": 2561934, "relation_to_type": "type", "validated": true, "ani": 75.6588, "matched_fragments": 108, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phreatobacter stygius", "strain": "strain=KCTC 52518", "accession": "GCA_005144885.1", "taxid": 1940610, "species_taxid": 1940610, "relation_to_type": "type", "validated": true, "ani": 75.6553, "matched_fragments": 162, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermithiobacillus tepidarius", "strain": "strain=DSM 3134", "accession": "GCA_000423825.1", "taxid": 929, "species_taxid": 929, "relation_to_type": "type", "validated": true, "ani": 75.338, "matched_fragments": 50, "total_fragments": 1182, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 62.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_014323865.1", "gtdb_species": "s__SP197 sp014323865", "ani": 78.3703, "matched_fragments": 350, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__SP197;f__SP197;g__SP197", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002722885.1", "gtdb_species": "s__SP197 sp002722885", "ani": 78.163, "matched_fragments": 415, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__SP197;f__SP197;g__SP197", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018700655.1", "gtdb_species": "s__SP197 sp018700655", "ani": 77.9369, "matched_fragments": 402, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__SP197;f__SP197;g__SP197", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.23", "min_intra_species_ani": "99.15", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.82", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_900102465.1", "gtdb_species": "s__Thalassobaculum litoreum", "ani": 76.8054, "matched_fragments": 185, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Thalassobaculales;f__Thalassobaculaceae;g__Thalassobaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177295.1", "gtdb_species": "s__Tistlia consotensis", "ani": 76.8043, "matched_fragments": 296, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__DSM-21159;g__Tistlia", "ani_circumscription_radius": 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"accession": "GCF_016467395.1", "gtdb_species": "s__Reyranella sp016467395", "ani": 76.435, "matched_fragments": 216, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Reyranellales;f__Reyranellaceae;g__Reyranella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900172325.1", "gtdb_species": "s__Oceanibacterium hippocampi", "ani": 76.4254, "matched_fragments": 162, "total_fragments": 1182, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sneathiellales;f__Sneathiellaceae;g__Oceanibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015232025.1", 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }