{ "tc_result": [ { "organism_name": "Sphingobium jiangsuense", "strain": "strain=DSM 26189", "accession": "GCA_014196495.1", "taxid": 870476, "species_taxid": 870476, "relation_to_type": "type", "validated": true, "ani": 81.3415, "matched_fragments": 457, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium fluviale", "strain": "strain=CHR27", "accession": "GCA_004122115.1", "taxid": 2506423, "species_taxid": 2506423, "relation_to_type": "type", "validated": true, "ani": 80.557, "matched_fragments": 368, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium xenophagum", "strain": "strain=NBRC 107872", "accession": "GCA_000367345.1", "taxid": 121428, "species_taxid": 121428, "relation_to_type": "type", "validated": true, "ani": 79.6277, "matched_fragments": 354, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium 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"strain=SC_3", "accession": "GCA_001757355.1", "taxid": 1592790, "species_taxid": 1592790, "relation_to_type": "type", "validated": true, "ani": 79.1006, "matched_fragments": 335, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium indicum", "strain": "strain=B90A", "accession": "GCA_000264945.2", "taxid": 332055, "species_taxid": 332055, "relation_to_type": "type", "validated": true, "ani": 79.0183, "matched_fragments": 332, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium yanoikuyae", "strain": "strain=ATCC 51230", "accession": "GCA_000315525.1", "taxid": 13690, "species_taxid": 13690, "relation_to_type": "suspected-type", "validated": true, "ani": 78.9102, "matched_fragments": 342, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium quisquiliarum", "strain": "strain=P25", "accession": "GCA_000445065.1", "taxid": 538379, "species_taxid": 538379, "relation_to_type": "type", "validated": true, "ani": 78.8795, "matched_fragments": 298, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium estronivorans", "strain": "strain=AXB", "accession": "GCA_008692605.1", "taxid": 1577690, "species_taxid": 1577690, "relation_to_type": "type", "validated": true, "ani": 78.8443, "matched_fragments": 317, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chungbukense", "strain": "strain=DJ77", "accession": "GCA_001005725.1", "taxid": 56193, "species_taxid": 56193, "relation_to_type": "type", "validated": true, "ani": 78.7677, "matched_fragments": 345, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium terrigena", "strain": "strain=EO9", "accession": "GCA_003591655.1", "taxid": 2304063, "species_taxid": 2304063, "relation_to_type": "type", 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"total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas baiyangensis", "strain": "strain=L-1-4 w-11", "accession": "GCA_005144715.1", "taxid": 2572576, "species_taxid": 2572576, "relation_to_type": "type", "validated": true, "ani": 77.8177, "matched_fragments": 227, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas alpina", "strain": "strain=DSM 22537", "accession": "GCA_025370095.1", "taxid": 653931, "species_taxid": 653931, "relation_to_type": "type", "validated": true, "ani": 77.6728, "matched_fragments": 214, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas alpina", "strain": "strain=DSM 22537", "accession": "GCA_014490665.1", "taxid": 653931, "species_taxid": 653931, "relation_to_type": "type", "validated": true, "ani": 77.6331, "matched_fragments": 217, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas glacialis", "strain": "strain=CGMCC 1.8957", "accession": "GCA_014653575.1", "taxid": 658225, "species_taxid": 658225, "relation_to_type": "type", "validated": true, "ani": 77.5141, "matched_fragments": 206, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas morindae", "strain": "strain=NBD5", "accession": "GCA_023822065.1", "taxid": 1541170, "species_taxid": 1541170, "relation_to_type": "type", "validated": true, "ani": 77.4916, "matched_fragments": 224, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas flavalba", "strain": "strain=ZLT-5", "accession": "GCA_004796535.1", "taxid": 2559804, "species_taxid": 2559804, "relation_to_type": "type", "validated": true, "ani": 77.4561, "matched_fragments": 212, "total_fragments": 706, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 71.76, 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"s__Sphingomonas glacialis_A", "ani": 77.6117, "matched_fragments": 217, "total_fragments": 706, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013409985.1", "gtdb_species": "s__Sphingomonas melonis_A", "ani": 77.4624, "matched_fragments": 233, "total_fragments": 706, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004345855.1", "gtdb_species": "s__Sphingomonas sp004345855", "ani": 77.3486, "matched_fragments": 214, "total_fragments": 706, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001421805.1", "gtdb_species": "s__Sphingomonas sp001421805", "ani": 77.2073, "matched_fragments": 179, "total_fragments": 706, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.24", "min_intra_species_ani": "98.24", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" } ] }