{ "tc_result": [ { "organism_name": "Sphingobium abikonense", "strain": "strain=NBRC 16140", "accession": "GCA_001598335.1", "taxid": 86193, "species_taxid": 86193, "relation_to_type": "type", "validated": true, "ani": 97.5817, "matched_fragments": 973, "total_fragments": 1049, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Sphingobium lactosutens", "strain": "strain=DS20", "accession": "GCA_000445105.1", "taxid": 522773, "species_taxid": 522773, "relation_to_type": "type", "validated": true, "ani": 95.5946, "matched_fragments": 913, "total_fragments": 1049, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Sphingobium limneticum", "strain": "strain=DSM 25076", "accession": "GCA_008710155.1", "taxid": 1007511, "species_taxid": 1007511, "relation_to_type": "type", "validated": true, "ani": 82.9861, "matched_fragments": 732, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium cupriresistens", "strain": "strain=CCTCC AB 2011146", "accession": "GCA_004152865.1", "taxid": 1132417, "species_taxid": 1132417, "relation_to_type": "type", "validated": true, "ani": 82.901, "matched_fragments": 703, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium amiense", "strain": "strain=NBRC 102518", "accession": "GCA_001591305.1", "taxid": 135719, "species_taxid": 135719, "relation_to_type": "type", "validated": true, "ani": 82.8828, "matched_fragments": 642, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium amiense", "strain": "strain=DSM 16289", "accession": "GCA_003967075.1", "taxid": 135719, "species_taxid": 135719, "relation_to_type": "type", "validated": true, "ani": 82.8249, "matched_fragments": 657, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium psychrophilum", "strain": "strain=AR-3-1", "accession": "GCA_012927105.1", "taxid": 2728834, "species_taxid": 2728834, "relation_to_type": "type", "validated": true, "ani": 82.7975, "matched_fragments": 717, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium yanoikuyae", "strain": "strain=ATCC 51230", "accession": "GCA_000315525.1", "taxid": 13690, "species_taxid": 13690, "relation_to_type": "suspected-type", "validated": true, "ani": 82.5785, "matched_fragments": 741, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium terrigena", "strain": "strain=EO9", "accession": "GCA_003591655.1", "taxid": 2304063, "species_taxid": 2304063, "relation_to_type": "type", "validated": true, "ani": 82.043, "matched_fragments": 680, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium indicum", "strain": "strain=B90A", "accession": "GCA_000264945.2", "taxid": 332055, "species_taxid": 332055, "relation_to_type": "type", "validated": true, "ani": 81.7259, "matched_fragments": 621, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium chungbukense", "strain": "strain=DJ77", "accession": "GCA_001005725.1", "taxid": 56193, "species_taxid": 56193, "relation_to_type": "type", "validated": true, "ani": 81.6837, "matched_fragments": 624, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium ummariense", "strain": "strain=RL-3", "accession": "GCA_000447205.1", "taxid": 420994, "species_taxid": 420994, "relation_to_type": "type", "validated": true, "ani": 81.5392, "matched_fragments": 642, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium estronivorans", "strain": "strain=AXB", "accession": "GCA_008692605.1", "taxid": 1577690, "species_taxid": 1577690, "relation_to_type": "type", "validated": true, "ani": 81.4704, "matched_fragments": 574, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas changnyeongensis", "strain": "strain=C33", "accession": "GCA_009913435.1", "taxid": 2698679, "species_taxid": 2698679, "relation_to_type": "type", "validated": true, "ani": 78.0964, "matched_fragments": 325, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 78.0428, "matched_fragments": 325, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas cavernae", "strain": "strain=K2R01-6", "accession": "GCA_003590775.1", "taxid": 2320861, "species_taxid": 2320861, "relation_to_type": "type", "validated": true, "ani": 77.6319, "matched_fragments": 296, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinicella ginsenosidimutans", "strain": "strain=BS-11", "accession": "GCA_007995055.1", "taxid": 1176539, "species_taxid": 1176539, "relation_to_type": "type", "validated": true, "ani": 77.3558, "matched_fragments": 237, "total_fragments": 1049, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001598335.1", "gtdb_species": "s__Sphingobium abikonense", "ani": 97.5817, "matched_fragments": 973, "total_fragments": 1049, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.3976, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": 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sp900109095", "ani": 82.8538, "matched_fragments": 754, "total_fragments": 1049, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }