{ "tc_result": [ { "organism_name": "Sphingosinithalassobacter tenebrarum", "strain": "strain=zrk23", "accession": "GCA_011057975.1", "taxid": 2711215, "species_taxid": 2711215, "relation_to_type": "type", "validated": true, "ani": 80.678, "matched_fragments": 266, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas trueperi", "strain": "strain=DSM 7225", "accession": "GCA_011927635.1", "taxid": 53317, "species_taxid": 53317, "relation_to_type": "type", "validated": true, "ani": 80.357, "matched_fragments": 259, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=KIS18-15", "accession": "GCA_004792695.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 80.3474, "matched_fragments": 286, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"GCA_003171655.1", "taxid": 2676234, "species_taxid": 2676234, "relation_to_type": "type", "validated": true, "ani": 80.2681, "matched_fragments": 269, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas kyeonggiensis", "strain": "strain=DSM 101806", "accession": "GCA_014196745.1", "taxid": 1268553, "species_taxid": 1268553, "relation_to_type": "type", "validated": true, "ani": 80.1079, "matched_fragments": 263, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas koreensis", "strain": "strain=NBRC 16723", "accession": "GCA_001598395.1", "taxid": 93064, "species_taxid": 93064, "relation_to_type": "type", "validated": true, "ani": 79.9248, "matched_fragments": 236, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas koreensis", "strain": "strain=KCTC 2882", "accession": "GCA_003953035.1", "taxid": 93064, 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"total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 79.2502, "matched_fragments": 244, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas turrisvirgatae", "strain": "strain=MCT13", "accession": "GCA_001721295.1", "taxid": 1888892, "species_taxid": 1888892, "relation_to_type": "type", "validated": true, "ani": 79.1747, "matched_fragments": 206, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas jinjuensis", "strain": "strain=YC6723", "accession": "GCA_014197105.1", "taxid": 535907, "species_taxid": 535907, "relation_to_type": "type", "validated": true, "ani": 79.1737, "matched_fragments": 216, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yunnanensis", "strain": "strain=YIM 3", "accession": "GCA_019898765.1", "taxid": 310400, "species_taxid": 310400, "relation_to_type": "type", "validated": true, "ani": 79.1382, "matched_fragments": 224, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citri", "strain": "strain=RRHST34", "accession": "GCA_019429485.1", "taxid": 2862499, "species_taxid": 2862499, "relation_to_type": "type", "validated": true, "ani": 78.957, "matched_fragments": 237, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 78.6546, "matched_fragments": 221, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"GCA_001757355.1", "taxid": 1592790, "species_taxid": 1592790, "relation_to_type": "type", "validated": true, "ani": 77.6568, "matched_fragments": 129, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium piscinae", "strain": "strain=KCTC 42194", "accession": "GCA_014230355.1", "taxid": 1507448, "species_taxid": 1507448, "relation_to_type": "type", "validated": true, "ani": 77.3271, "matched_fragments": 140, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 66.1, "contamination": 1.39, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014334115.1", "gtdb_species": "s__Sphingomonas sp014334115", "ani": 82.3102, "matched_fragments": 292, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": 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72, "status": "-" }, { "accession": "GCF_003550065.1", "gtdb_species": "s__Sphingomonas caeni", "ani": 79.2499, "matched_fragments": 236, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007833215.1", "gtdb_species": "s__Sphingomonas sp007833215", "ani": 79.22, "matched_fragments": 246, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014197105.1", "gtdb_species": "s__Sphingomonas jinjuensis", "ani": 79.1946, "matched_fragments": 215, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001557215.1", "gtdb_species": "s__Sphingomonas sp001557215", "ani": 79.1145, "matched_fragments": 207, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.89", "min_intra_species_ani": "99.89", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014199595.1", "gtdb_species": "s__Sphingomonas yabuuchiae", "ani": 78.8448, "matched_fragments": 181, "total_fragments": 443, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.94", "min_intra_species_ani": "96.78", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" } ] }