{ "tc_result": [ { "organism_name": "Sphingomonas ginsenosidivorax", "strain": "strain=KHI67", "accession": "GCA_007995065.1", "taxid": 862135, "species_taxid": 862135, "relation_to_type": "type", "validated": true, "ani": 79.5755, "matched_fragments": 233, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas insulae", "strain": "strain=DSM 21792", "accession": "GCA_011762035.1", "taxid": 424800, "species_taxid": 424800, "relation_to_type": "type", "validated": true, "ani": 79.499, "matched_fragments": 228, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas insulae", "strain": "strain=KCTC 12872", "accession": "GCA_010450875.1", "taxid": 424800, "species_taxid": 424800, "relation_to_type": "type", "validated": true, "ani": 79.4176, "matched_fragments": 233, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aurantiaca", "strain": "strain=MA101b", "accession": "GCA_003050705.1", "taxid": 185949, "species_taxid": 185949, "relation_to_type": "type", "validated": true, "ani": 79.3111, "matched_fragments": 246, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aquatilis", "strain": "strain=DSM 15581", "accession": "GCA_014196115.1", "taxid": 93063, "species_taxid": 93063, "relation_to_type": "type", "validated": true, "ani": 79.1938, "matched_fragments": 241, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas melonis", "strain": "strain=DAPP-PG 224", "accession": "GCA_000379045.1", "taxid": 152682, "species_taxid": 152682, "relation_to_type": "type", "validated": true, "ani": 79.1575, "matched_fragments": 253, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aerolata", "strain": "strain=NW12", "accession": "GCA_003046295.1", "taxid": 185951, "species_taxid": 185951, "relation_to_type": "type", "validated": true, "ani": 79.0852, "matched_fragments": 232, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aquatilis", "strain": "strain=NBRC 16722", "accession": "GCA_007990915.1", "taxid": 93063, "species_taxid": 93063, "relation_to_type": "type", "validated": true, "ani": 78.8926, "matched_fragments": 236, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas panacisoli", "strain": "strain=HKS19", "accession": "GCA_007859635.1", "taxid": 1813879, "species_taxid": 1813879, "relation_to_type": "type", "validated": true, "ani": 78.6807, "matched_fragments": 180, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas albertensis", "strain": "strain=DOAB 1063", "accession": "GCA_014358075.1", "taxid": 2762591, "species_taxid": 2762591, "relation_to_type": "type", "validated": true, "ani": 78.3813, "matched_fragments": 209, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas abaci", "strain": "strain=DSM 15867", "accession": "GCA_014199625.1", "taxid": 237611, "species_taxid": 237611, "relation_to_type": "type", "validated": true, "ani": 78.3807, "matched_fragments": 202, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas faeni", "strain": "strain=MA-olki", "accession": "GCA_003053745.1", "taxid": 185950, "species_taxid": 185950, "relation_to_type": "type", "validated": true, "ani": 78.372, "matched_fragments": 222, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas panacis", "strain": "strain=DCY99", "accession": "GCA_001717955.1", "taxid": 1560345, "species_taxid": 1560345, "relation_to_type": "type", "validated": true, "ani": 78.249, "matched_fragments": 190, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas mali", "strain": "strain=NBRC 15500", "accession": "GCA_001598415.1", "taxid": 40682, "species_taxid": 40682, "relation_to_type": "type", "validated": true, "ani": 78.1944, "matched_fragments": 186, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter portus", "strain": "strain=FM6", "accession": "GCA_003171655.1", "taxid": 2676234, "species_taxid": 2676234, "relation_to_type": "type", "validated": true, "ani": 78.0839, "matched_fragments": 161, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=DSM 100060", "accession": "GCA_011762145.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 77.9159, "matched_fragments": 179, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter tenebrarum", "strain": "strain=zrk23", "accession": "GCA_011057975.1", "taxid": 2711215, "species_taxid": 2711215, "relation_to_type": "type", "validated": true, "ani": 77.9143, "matched_fragments": 161, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=KIS18-15", "accession": "GCA_004792695.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 77.8973, "matched_fragments": 180, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aracearum", "strain": "strain=WZY 27", "accession": "GCA_003345355.1", "taxid": 2283317, "species_taxid": 2283317, "relation_to_type": "type", "validated": true, "ani": 77.5322, "matched_fragments": 170, "total_fragments": 483, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 56.24, "contamination": 3.82, "strain_heterogeneity": 66.67 }, "gtdb_result": [ { "accession": "GCF_006438955.1", "gtdb_species": "s__Sphingomonas oligophenolica", "ani": 81.314, "matched_fragments": 306, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007995065.1", "gtdb_species": "s__Sphingomonas ginsenosidivorax", "ani": 79.563, "matched_fragments": 234, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000632225.1", "gtdb_species": "s__Sphingomonas sp000632225", "ani": 79.4066, "matched_fragments": 249, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003050705.1", "gtdb_species": "s__Sphingomonas aurantiaca", "ani": 79.3111, "matched_fragments": 246, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.29", "min_intra_species_ani": "95.02", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.86", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_014196115.1", "gtdb_species": "s__Sphingomonas aquatilis", "ani": 79.1938, "matched_fragments": 241, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.36", "min_intra_species_ani": "95.86", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.82", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_003046295.1", "gtdb_species": "s__Sphingomonas aerolata", "ani": 79.0901, "matched_fragments": 233, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.52", "min_intra_species_ani": "96.36", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.73", "num_clustered_genomes": 15, "status": "-" }, { "accession": "GCA_003075315.1", "gtdb_species": "s__Sphingomonas sp003075315", "ani": 78.9856, "matched_fragments": 251, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.84", "min_intra_species_ani": "96.53", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_902506455.1", "gtdb_species": "s__Sphingomonas sp902506455", "ani": 78.8769, "matched_fragments": 169, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016427505.1", "gtdb_species": "s__Sphingomonas sp016427505", "ani": 78.7879, "matched_fragments": 206, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014204695.1", "gtdb_species": "s__Sphingomonas sp001897045", "ani": 78.69, "matched_fragments": 210, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "96.97", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.83", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_007859635.1", "gtdb_species": "s__Sphingomonas panacisoli", "ani": 78.6807, "matched_fragments": 180, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001421745.1", "gtdb_species": "s__Sphingomonas sp001421745", "ani": 78.673, "matched_fragments": 214, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001717955.1", "gtdb_species": "s__Sphingomonas panacis", "ani": 78.2489, "matched_fragments": 190, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003171655.1", "gtdb_species": "s__Sphingomonas portus", "ani": 78.1057, "matched_fragments": 160, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000419605.1", "gtdb_species": "s__Sphingomonas phyllosphaerae_B", "ani": 78.1016, "matched_fragments": 170, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011057975.1", "gtdb_species": "s__Sphingomonas sp011057975", "ani": 77.9143, "matched_fragments": 161, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014489075.1", "gtdb_species": "s__Sphingomonas sp014489075", "ani": 77.8939, "matched_fragments": 172, "total_fragments": 483, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }