{ "tc_result": [ { "organism_name": "Tistrella bauzanensis", "strain": "strain=CGMCC 1.10188", "accession": "GCA_014636235.1", "taxid": 657419, "species_taxid": 657419, "relation_to_type": "type", "validated": true, "ani": 83.151, "matched_fragments": 1145, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zavarzinia aquatilis", "strain": "strain=HR-AS", "accession": "GCA_003173035.1", "taxid": 2211142, "species_taxid": 2211142, "relation_to_type": "type", "validated": true, "ani": 76.7168, "matched_fragments": 310, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella pratensis", "strain": "strain=W17", "accession": "GCA_008843145.1", "taxid": 2233999, "species_taxid": 2233999, "relation_to_type": "type", "validated": true, "ani": 76.7073, "matched_fragments": 312, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum 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"GCA_014904705.1", "taxid": 2775867, "species_taxid": 2775867, "relation_to_type": "type", "validated": true, "ani": 76.5558, "matched_fragments": 235, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hypericibacter adhaerens", "strain": "strain=R5959", "accession": "GCA_008728835.1", "taxid": 2602016, "species_taxid": 2602016, "relation_to_type": "type", "validated": true, "ani": 76.4798, "matched_fragments": 354, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella mucosa", "strain": "strain=KEMB 2255-438", "accession": "GCA_016765655.2", "taxid": 1789672, "species_taxid": 1789672, "relation_to_type": "type", "validated": true, "ani": 76.4646, "matched_fragments": 388, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=ATCC 43930", "accession": "GCA_006738645.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 76.4301, "matched_fragments": 406, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=DSM 5900", "accession": "GCA_003751345.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 76.4251, "matched_fragments": 408, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geminicoccus roseus", "strain": "strain=DSM 18922", "accession": "GCA_000427665.1", "taxid": 404900, "species_taxid": 404900, "relation_to_type": "type", "validated": true, "ani": 76.3889, "matched_fragments": 317, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenibaculum pallidiluteum", "strain": "strain=SYSU D00532", "accession": "GCA_017355985.1", "taxid": 2812559, "species_taxid": 2812559, "relation_to_type": "type", "validated": true, "ani": 76.2902, "matched_fragments": 325, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobaculum fulvum", "strain": "strain=KCTC 42651", "accession": "GCA_014652915.1", "taxid": 1633335, "species_taxid": 1633335, "relation_to_type": "type", "validated": true, "ani": 76.2793, "matched_fragments": 403, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=SM30", "accession": "GCA_011317485.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 76.277, "matched_fragments": 283, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium nitroreducens", "strain": "strain=TSA1", "accession": "GCA_002776695.1", "taxid": 709803, "species_taxid": 709803, "relation_to_type": "type", "validated": true, "ani": 76.2106, "matched_fragments": 259, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibium microcysteis", "strain": "strain=NIBR3", "accession": "GCA_014495845.1", "taxid": 675281, "species_taxid": 675281, "relation_to_type": "type", "validated": true, "ani": 76.1509, "matched_fragments": 279, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia hirudinis", "strain": "strain=DSM 25966", "accession": "GCA_014196455.1", "taxid": 1293440, "species_taxid": 1293440, "relation_to_type": "type", "validated": true, "ani": 76.1181, "matched_fragments": 247, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paroceanicella profunda", "strain": "strain=D4M1", "accession": "GCA_005887635.2", "taxid": 2579971, "species_taxid": 2579971, "relation_to_type": "type", "validated": true, "ani": 76.1, "matched_fragments": 279, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oharaeibacter diazotrophicus", "strain": "strain=DSM 102969", "accession": "GCA_004362745.1", "taxid": 1920512, "species_taxid": 1920512, "relation_to_type": "type", "validated": true, "ani": 76.0712, "matched_fragments": 333, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 75.9524, "matched_fragments": 363, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas oryzae", "strain": "strain=KCTC 42542", "accession": "GCA_008386565.1", "taxid": 1608942, "species_taxid": 1608942, "relation_to_type": "type", "validated": true, "ani": 75.9094, "matched_fragments": 278, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella pollutisoli", "strain": "strain=KCTC 52677", "accession": "GCA_024609765.1", "taxid": 2250594, "species_taxid": 2250594, "relation_to_type": "type", "validated": true, "ani": 75.8742, "matched_fragments": 273, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phenylobacterium soli", "strain": "strain=LX32", "accession": "GCA_003254475.1", "taxid": 2170551, "species_taxid": 2170551, "relation_to_type": "type", "validated": true, "ani": 75.8137, "matched_fragments": 194, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus thiosulfatophilus", "strain": "strain=RB-3", "accession": "GCA_017311575.1", "taxid": 35813, "species_taxid": 35813, "relation_to_type": "type", "validated": true, "ani": 75.7131, "matched_fragments": 248, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yunnanensis", "strain": "strain=YIM 3", "accession": "GCA_019898765.1", "taxid": 310400, "species_taxid": 310400, "relation_to_type": "type", "validated": true, "ani": 75.6487, "matched_fragments": 189, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas psychrotolerans", "strain": "strain=Cra20", "accession": "GCA_002796605.1", "taxid": 1327635, "species_taxid": 1327635, "relation_to_type": "type", "validated": true, "ani": 75.4451, "matched_fragments": 156, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 75.4158, "matched_fragments": 194, "total_fragments": 1725, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.38, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000264455.2", "gtdb_species": "s__Tistrella mobilis", "ani": 96.0865, "matched_fragments": 1594, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Tistrellales;f__Tistrellaceae;g__Tistrella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.38", "min_intra_species_ani": "95.97", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.84", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_014636235.1", "gtdb_species": "s__Tistrella bauzanensis", "ani": 83.1617, "matched_fragments": 1144, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Tistrellales;f__Tistrellaceae;g__Tistrella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_006739055.1", "gtdb_species": "s__Stella vacuolata", 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"total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__GCA-2721365;f__GCA-2721365;g__GCA-2721365", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000427665.1", "gtdb_species": "s__Geminicoccus roseus", "ani": 76.3825, "matched_fragments": 318, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Geminicoccales;f__Geminicoccaceae;g__Geminicoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003116015.1", "gtdb_species": "s__Azospirillum sp003116015", "ani": 76.3777, "matched_fragments": 420, "total_fragments": 1725, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Thalassobaculales;f__Thalassobaculaceae;g__Thalassobaculum_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903856295.1", "gtdb_species": "s__CAIZDL01 sp903856295", "ani": 76.2684, "matched_fragments": 198, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__CAIZDL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014495845.1", "gtdb_species": "s__Mesorhizobium_E sp014495845", "ani": 76.1533, "matched_fragments": 279, "total_fragments": 1725, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methylopilaceae;g__Methylopila", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903858635.1", "gtdb_species": "s__Telmatospirillum sp903858635", "ani": 75.9681, "matched_fragments": 255, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Magnetospirillaceae;g__Telmatospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.86", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_008386565.1", "gtdb_species": "s__Roseomonas oryzae", "ani": 75.9213, "matched_fragments": 274, "total_fragments": 1725, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__JAEULF01;f__JAEULF01;g__JAEULF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009908425.1", "gtdb_species": "s__JAAAPF01 sp009908425", "ani": 75.7134, "matched_fragments": 190, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Geminicoccales;f__Geminicoccaceae;g__JAAAPF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007693835.1", "gtdb_species": "s__Rubrimonas sp007693835", "ani": 75.6412, "matched_fragments": 194, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubrimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002501105.1", "gtdb_species": "s__UBA7887 sp002501105", "ani": 75.6389, "matched_fragments": 55, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA7887;f__UBA7887;g__UBA7887", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903843125.1", "gtdb_species": "s__CAIMOR01 sp903843125", "ani": 75.5076, "matched_fragments": 303, "total_fragments": 1725, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__CAIMOR01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.35", "min_intra_species_ani": "99.29", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.84", "num_clustered_genomes": 4, "status": "-" } ] }