{ "tc_result": [ { "organism_name": "Skermanella pratensis", "strain": "strain=W17", "accession": "GCA_008843145.1", "taxid": 2233999, "species_taxid": 2233999, "relation_to_type": "type", "validated": true, "ani": 76.3053, "matched_fragments": 134, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 76.242, "matched_fragments": 102, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenibaculum pallidiluteum", "strain": "strain=SYSU D00532", "accession": "GCA_017355985.1", "taxid": 2812559, "species_taxid": 2812559, "relation_to_type": "type", "validated": true, "ani": 76.2381, "matched_fragments": 118, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea sediminum", "strain": "strain=NBU1469", "accession": "GCA_014904705.1", "taxid": 2775867, "species_taxid": 2775867, "relation_to_type": "type", "validated": true, "ani": 76.2168, "matched_fragments": 127, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hypericibacter adhaerens", "strain": "strain=R5959", "accession": "GCA_008728835.1", "taxid": 2602016, "species_taxid": 2602016, "relation_to_type": "type", "validated": true, "ani": 76.1886, "matched_fragments": 152, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagibius marinus", "strain": "strain=NBU2595", "accession": "GCA_014925385.1", "taxid": 2762760, "species_taxid": 2762760, "relation_to_type": "type", "validated": true, "ani": 76.1819, "matched_fragments": 158, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=ATCC 43930", "accession": "GCA_006738645.1", 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true, "ani": 76.1065, "matched_fragments": 114, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=USBA 355", "accession": "GCA_900177295.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 76.0716, "matched_fragments": 177, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=DSM 21585", "accession": "GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 76.0688, "matched_fragments": 180, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inquilinus limosus", "strain": "strain=DSM 16000", "accession": "GCA_000423185.1", "taxid": 171674, "species_taxid": 171674, "relation_to_type": "type", "validated": true, "ani": 76.0632, "matched_fragments": 153, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum brasilense", "strain": "strain=Sp 7", "accession": "GCA_002027385.1", "taxid": 192, "species_taxid": 192, "relation_to_type": "type", "validated": true, "ani": 76.047, "matched_fragments": 132, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum halopraeferens", "strain": "strain=DSM 3675", "accession": "GCA_000429625.1", "taxid": 34010, "species_taxid": 34010, "relation_to_type": "type", "validated": true, "ani": 76.0416, "matched_fragments": 125, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum caucaseum", "strain": "strain=SO-1", "accession": "GCA_000342045.1", "taxid": 1244869, "species_taxid": 1244869, "relation_to_type": "type", "validated": true, "ani": 76.0245, "matched_fragments": 101, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum formosense", "strain": "strain=CC-NFb-7", "accession": "GCA_013340925.1", "taxid": 861533, "species_taxid": 861533, "relation_to_type": "type", "validated": true, "ani": 76.0149, "matched_fragments": 114, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitrospirillum iridis", "strain": "strain=DSM 22198", "accession": "GCA_014205765.1", "taxid": 765888, "species_taxid": 765888, "relation_to_type": "type", "validated": true, "ani": 76.0144, "matched_fragments": 89, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum cavernae", "strain": "strain=K2W22B-5", "accession": "GCA_003590795.1", "taxid": 2320860, "species_taxid": 2320860, "relation_to_type": "type", "validated": true, "ani": 75.9167, "matched_fragments": 108, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea 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"accession": "GCA_002845745.1", "taxid": 382514, "species_taxid": 382514, "relation_to_type": "type", "validated": true, "ani": 75.8128, "matched_fragments": 69, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus limosus", "strain": "strain=JCM 17370", "accession": "GCA_009711185.1", "taxid": 913252, "species_taxid": 913252, "relation_to_type": "type", "validated": true, "ani": 75.7514, "matched_fragments": 67, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoplanes elegans", "strain": "strain=DSM 11907", "accession": "GCA_003258805.1", "taxid": 29408, "species_taxid": 29408, "relation_to_type": "type", "validated": true, "ani": 75.7165, "matched_fragments": 92, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoplanes elegans", "strain": "strain=DSM 11907", "accession": "GCA_016653355.1", "taxid": 29408, "species_taxid": 29408, "relation_to_type": "type", "validated": true, "ani": 75.696, "matched_fragments": 104, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium sanjuanii", "strain": "strain=BSA136", "accession": "GCA_002529485.1", "taxid": 2037900, "species_taxid": 2037900, "relation_to_type": "type", "validated": true, "ani": 75.6882, "matched_fragments": 79, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Elioraea tepida", "strain": "strain=MS-P2", "accession": "GCA_019203965.1", "taxid": 2843330, "species_taxid": 2843330, "relation_to_type": "type", "validated": true, "ani": 75.6447, "matched_fragments": 65, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas changbaiensis", "strain": "strain=NBRC 104936", "accession": "GCA_000974765.1", "taxid": 529705, "species_taxid": 529705, "relation_to_type": "type", "validated": true, "ani": 75.6155, "matched_fragments": 62, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus microcysteis", "strain": "strain=NIBR12", "accession": "GCA_014764365.1", "taxid": 2771361, "species_taxid": 2771361, "relation_to_type": "type", "validated": true, "ani": 75.5064, "matched_fragments": 82, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinarimonas ramus", "strain": "strain=CGMCC 1.9161", "accession": "GCA_014645695.1", "taxid": 690164, "species_taxid": 690164, "relation_to_type": "type", "validated": true, "ani": 75.4552, "matched_fragments": 88, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citri", "strain": "strain=RRHST34", "accession": "GCA_019429485.1", "taxid": 2862499, "species_taxid": 2862499, "relation_to_type": "type", "validated": true, "ani": 75.286, "matched_fragments": 93, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 62.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_018667335.1", "gtdb_species": "s__UBA8079 sp018667335", "ani": 88.8802, "matched_fragments": 938, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.89", "min_intra_species_ani": "99.79", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_018702955.1", "gtdb_species": "s__UBA8079 sp018702955", "ani": 84.7711, "matched_fragments": 826, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.54", "min_intra_species_ani": "99.39", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_002727315.1", "gtdb_species": "s__UBA8079 sp002727315", "ani": 79.7916, "matched_fragments": 448, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002724635.1", "gtdb_species": "s__UBA8079 sp002724635", "ani": 79.321, "matched_fragments": 492, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017643325.1", "gtdb_species": "s__JABJAG01 sp017643325", "ani": 78.6125, "matched_fragments": 389, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__JABJAG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002722515.1", "gtdb_species": "s__UBA8079 sp002722515", "ani": 77.9213, "matched_fragments": 259, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018666195.1", "gtdb_species": "s__JABJAG01 sp018666195", "ani": 77.5617, "matched_fragments": 289, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__JABJAG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003576685.1", "gtdb_species": "s__SYSU-D60014 sp003576685", "ani": 76.3069, "matched_fragments": 130, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Dongiales;f__Dongiaceae;g__SYSU-D60014", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009711185.1", "gtdb_species": "s__Paracoccus limosus", "ani": 75.7312, "matched_fragments": 68, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000763885.1", "gtdb_species": "s__Paracoccus versutus", "ani": 75.6245, "matched_fragments": 88, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.67", "min_intra_species_ani": "98.17", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.76", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_014645695.1", "gtdb_species": "s__Salinarimonas ramus", "ani": 75.4599, "matched_fragments": 90, "total_fragments": 1168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }