{ "tc_result": [ { "organism_name": "Hypericibacter adhaerens", "strain": "strain=R5959", "accession": "GCA_008728835.1", "taxid": 2602016, "species_taxid": 2602016, "relation_to_type": "type", "validated": true, "ani": 76.2529, "matched_fragments": 118, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum nanhaiense", "strain": "strain=L54-1-50", "accession": "GCA_002148795.1", "taxid": 1909734, "species_taxid": 1909734, "relation_to_type": "type", "validated": true, "ani": 75.993, "matched_fragments": 99, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum pacificum", "strain": "strain=MCCC 1A02656", "accession": "GCA_001618175.1", "taxid": 580166, "species_taxid": 580166, "relation_to_type": "type", "validated": true, "ani": 75.9322, "matched_fragments": 96, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Elioraea tepida", "strain": "strain=MS-P2", "accession": "GCA_019203965.1", "taxid": 2843330, "species_taxid": 2843330, "relation_to_type": "type", "validated": true, "ani": 75.8427, "matched_fragments": 52, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 75.7958, "matched_fragments": 90, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum indicum", "strain": "strain=P24", "accession": "GCA_000299935.1", "taxid": 526216, "species_taxid": 526216, "relation_to_type": "type", "validated": true, "ani": 75.7949, "matched_fragments": 102, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inquilinus limosus", "strain": "strain=DSM 16000", "accession": "GCA_000423185.1", "taxid": 171674, "species_taxid": 171674, "relation_to_type": "type", "validated": true, "ani": 75.7809, "matched_fragments": 116, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella pratensis", "strain": "strain=W17", "accession": "GCA_008843145.1", "taxid": 2233999, "species_taxid": 2233999, "relation_to_type": "type", "validated": true, "ani": 75.7678, "matched_fragments": 83, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella rosea", "strain": "strain=KEMB 2255-458", "accession": "GCA_016806835.2", "taxid": 1817965, "species_taxid": 1817965, "relation_to_type": "type", "validated": true, "ani": 75.7291, "matched_fragments": 81, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum aberrantis", "strain": "strain=SpK", "accession": "GCA_011022235.1", "taxid": 1105283, "species_taxid": 1105283, "relation_to_type": "type", "validated": true, "ani": 75.6547, "matched_fragments": 71, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=ATCC 43930", "accession": "GCA_006738645.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 75.5995, "matched_fragments": 112, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=DSM 5900", "accession": "GCA_003751345.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 75.5709, "matched_fragments": 113, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium hawassense", "strain": "strain=AC99b", "accession": "GCA_003289945.1", "taxid": 1209954, "species_taxid": 1209954, "relation_to_type": "type", "validated": true, "ani": 75.551, "matched_fragments": 91, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris tepida", "strain": "strain=GI", "accession": "GCA_003966715.1", "taxid": 2233851, "species_taxid": 2233851, "relation_to_type": "type", "validated": true, "ani": 75.5113, "matched_fragments": 79, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Skermanella mucosa", "strain": "strain=KEMB 2255-438", "accession": "GCA_016765655.2", "taxid": 1789672, "species_taxid": 1789672, "relation_to_type": "type", "validated": true, "ani": 75.5108, "matched_fragments": 99, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella zoogloeoides", "strain": "strain=ATCC 19623", "accession": "GCA_020883495.1", "taxid": 352475, "species_taxid": 352475, "relation_to_type": "type", "validated": true, "ani": 75.4619, "matched_fragments": 64, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum kuznetsovii", "strain": "strain=LBB-42", "accession": "GCA_003284725.1", "taxid": 2053833, "species_taxid": 2053833, "relation_to_type": "type", "validated": true, "ani": 75.4208, "matched_fragments": 79, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium zhangyense", "strain": "strain=CGMCC 1.15528", "accession": "GCA_011045115.1", "taxid": 1776730, "species_taxid": 1776730, "relation_to_type": "type", "validated": true, "ani": 75.4194, "matched_fragments": 60, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella curvata", "strain": "strain=C3", "accession": "GCA_022899935.1", "taxid": 1817964, "species_taxid": 1817964, "relation_to_type": "type", "validated": true, "ani": 75.221, "matched_fragments": 73, "total_fragments": 881, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.38, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_002937555.1", "gtdb_species": "s__PTKB01 sp002937555", "ani": 99.2988, "matched_fragments": 586, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA828;f__UBA828;g__PTKB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_018666805.1", "gtdb_species": "s__PTKB01 sp018666805", "ani": 80.373, "matched_fragments": 592, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA828;f__UBA828;g__PTKB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.32", "min_intra_species_ani": "99.22", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_002717225.1", "gtdb_species": "s__PTKB01 sp002717225", "ani": 76.7517, "matched_fragments": 170, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA828;f__UBA828;g__PTKB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011523425.1", "gtdb_species": "s__WTGU01 sp011523425", "ani": 76.6977, "matched_fragments": 196, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA828;f__UBA828;g__WTGU01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009691045.1", "gtdb_species": "s__SHWC01 sp009691045", "ani": 76.4639, "matched_fragments": 82, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA828;f__UBA828;g__SHWC01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015232025.1", "gtdb_species": "s__JADFZP01 sp015232025", "ani": 75.9897, "matched_fragments": 57, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Magnetospirillaceae;g__JADFZP01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_015232485.1", "gtdb_species": "s__JADFZP01 sp015232485", "ani": 75.9802, "matched_fragments": 69, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Magnetospirillaceae;g__JADFZP01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.70", "min_intra_species_ani": "95.97", "mean_intra_species_af": "0.70", "min_intra_species_af": "0.69", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002148795.1", "gtdb_species": "s__Oceanibaculum nanhaiense", "ani": 75.9778, "matched_fragments": 100, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Oceanibaculales;f__Oceanibaculaceae;g__Oceanibaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001618175.1", "gtdb_species": "s__Oceanibaculum pacificum", "ani": 75.9322, "matched_fragments": 96, "total_fragments": 881, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Magnetospirillaceae;g__Magnetospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000423185.1", "gtdb_species": "s__Inquilinus limosus", "ani": 75.7933, "matched_fragments": 115, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__DSM-16000;f__Inquilinaceae;g__Inquilinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016869645.1", "gtdb_species": "s__SHVW01 sp016869645", "ani": 75.7806, "matched_fragments": 118, "total_fragments": 881, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__MPNO01;f__UBA2964;g__WHUE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902706185.1", "gtdb_species": "s__Roseomonas sp902706185", "ani": 75.4923, "matched_fragments": 91, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900492205.1", "gtdb_species": "s__Allorhizobium naphthalenivorans_A", "ani": 75.4304, "matched_fragments": 64, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Allorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.27", "min_intra_species_ani": "95.27", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017418605.1", "gtdb_species": "s__CAISGS01 sp017418605", "ani": 75.3855, "matched_fragments": 82, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__CAISGS01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002796995.1", "gtdb_species": "s__Allorhizobium sp002796995", "ani": 75.3799, "matched_fragments": 74, "total_fragments": 881, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Allorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.22", "min_intra_species_ani": "96.20", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.93", "num_clustered_genomes": 7, "status": "-" } ] }