{ "tc_result": [ { "organism_name": "Pusillimonas maritima", "strain": "strain=17-4A", "accession": "GCA_003576595.1", "taxid": 2026239, "species_taxid": 2026239, "relation_to_type": "type", "validated": true, "ani": 83.7189, "matched_fragments": 745, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas minor", "strain": "strain=YC-7-48", "accession": "GCA_014237865.1", "taxid": 2697024, "species_taxid": 2697024, "relation_to_type": "type", "validated": true, "ani": 77.6125, "matched_fragments": 250, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eoetvoesia caeni", "strain": "strain=PB3-7B", "accession": "GCA_022688825.1", "taxid": 645616, "species_taxid": 645616, "relation_to_type": "type", "validated": true, "ani": 77.3943, "matched_fragments": 172, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas noertemannii", "strain": "strain=DSM 10065", "accession": "GCA_003096595.1", "taxid": 305977, "species_taxid": 305977, "relation_to_type": "type", "validated": true, "ani": 77.3322, "matched_fragments": 171, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas noertemannii", "strain": "strain=DSM 10065", "accession": "GCA_003545825.1", "taxid": 305977, "species_taxid": 305977, "relation_to_type": "type", "validated": true, "ani": 77.3201, "matched_fragments": 172, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Candidimonas humi", "strain": "strain=DSM 25336", "accession": "GCA_019166065.1", "taxid": 683355, "species_taxid": 683355, "relation_to_type": "type", "validated": true, "ani": 77.2809, "matched_fragments": 109, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas harenae", "strain": "strain=JCM 16917", "accession": "GCA_004153685.1", "taxid": 657015, "species_taxid": 657015, "relation_to_type": "type", "validated": true, "ani": 77.0852, "matched_fragments": 125, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas harenae", "strain": "strain=DSM 25667", "accession": "GCA_013416515.1", "taxid": 657015, "species_taxid": 657015, "relation_to_type": "type", "validated": true, "ani": 77.0837, "matched_fragments": 125, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paralcaligenes ureilyticus", "strain": "strain=DSM 24591", "accession": "GCA_004346225.1", "taxid": 627131, "species_taxid": 627131, "relation_to_type": "type", "validated": true, "ani": 76.7733, "matched_fragments": 109, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella bronchiseptica", "strain": "strain=CCUG 219", "accession": "GCA_021391275.1", "taxid": 518, "species_taxid": 518, "relation_to_type": "suspected-type", "validated": true, "ani": 76.5971, "matched_fragments": 104, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracandidimonas soli", "strain": "strain=DSM 100048", "accession": "GCA_004342005.1", "taxid": 1917182, "species_taxid": 1917182, "relation_to_type": "type", "validated": true, "ani": 76.5581, "matched_fragments": 103, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=CCUG 39790", "accession": "GCA_008801975.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.4429, "matched_fragments": 87, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=DSM 12141", "accession": "GCA_014203015.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.4277, "matched_fragments": 89, "total_fragments": 1045, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002384935.1", "gtdb_species": "s__Pusillimonas_A sp002384935", "ani": 98.2642, "matched_fragments": 933, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.90", "min_intra_species_ani": "98.23", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.79", "num_clustered_genomes": 9, "status": "conclusive" }, { "accession": "GCF_003576595.1", "gtdb_species": "s__Pusillimonas_A maritima", "ani": 83.7189, "matched_fragments": 745, "total_fragments": 1045, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000209655.1", "gtdb_species": "s__Pusillimonas_C sp000209655", "ani": 78.2098, "matched_fragments": 135, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014237865.1", "gtdb_species": "s__Pusillimonas_A sp014237865", "ani": 77.6125, "matched_fragments": 250, "total_fragments": 1045, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAAYGT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004346225.1", "gtdb_species": "s__Paralcaligenes ureilyticus", "ani": 76.7733, "matched_fragments": 109, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paralcaligenes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016127315.1", "gtdb_species": "s__Achromobacter insuavis_A", "ani": 76.3354, "matched_fragments": 108, "total_fragments": 1045, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.6014, "mean_intra_species_ani": "97.14", "min_intra_species_ani": "97.13", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" } ] }