{ "tc_result": [ { "organism_name": "Marichromatium gracile", "strain": "strain=DSM 203", "accession": "GCA_016583515.1", "taxid": 1048, "species_taxid": 1048, "relation_to_type": "type", "validated": true, "ani": 77.0115, "matched_fragments": 130, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marichromatium gracile", "strain": "strain=DSM 203", "accession": "GCA_004343155.1", "taxid": 1048, "species_taxid": 1048, "relation_to_type": "type", "validated": true, "ani": 76.9916, "matched_fragments": 131, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalocapsa marina", "strain": "strain=DSM 19078", "accession": "GCA_008632335.1", "taxid": 424902, "species_taxid": 424902, "relation_to_type": "type", "validated": true, "ani": 76.9747, "matched_fragments": 130, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marichromatium purpuratum", "strain": "strain=984", "accession": "GCA_000224005.3", "taxid": 37487, "species_taxid": 37487, "relation_to_type": "type", "validated": true, "ani": 76.9213, "matched_fragments": 135, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurivermis fontis", "strain": "strain=JG42", "accession": "GCA_004001245.1", "taxid": 1972068, "species_taxid": 1972068, "relation_to_type": "type", "validated": true, "ani": 76.856, "matched_fragments": 113, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allochromatium vinosum", "strain": "strain=DSM 180", "accession": "GCA_000025485.1", "taxid": 1049, "species_taxid": 1049, "relation_to_type": "type", "validated": true, "ani": 76.8265, "matched_fragments": 108, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allochromatium humboldtianum", "strain": "strain=DSM 21881", "accession": "GCA_013385175.1", "taxid": 504901, "species_taxid": 504901, "relation_to_type": "type", "validated": true, "ani": 76.7191, "matched_fragments": 108, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halochromatium glycolicum", "strain": "strain=DSM 11080", "accession": "GCA_016584085.1", "taxid": 85075, "species_taxid": 85075, "relation_to_type": "type", "validated": true, "ani": 76.6995, "matched_fragments": 95, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio thiocyanoxidans", "strain": "strain=ARh2", "accession": "GCA_000385215.1", "taxid": 152475, "species_taxid": 152475, "relation_to_type": "type", "validated": true, "ani": 76.691, "matched_fragments": 74, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allochromatium tepidum", "strain": "strain=NZ", "accession": "GCA_018409545.1", "taxid": 553982, "species_taxid": 553982, "relation_to_type": "type", "validated": true, "ani": 76.631, "matched_fragments": 104, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalophilus thiocyanatoxydans", "strain": "strain=DSM 16326", "accession": "GCA_004366735.1", "taxid": 381308, "species_taxid": 381308, "relation_to_type": "type", "validated": true, "ani": 76.6128, "matched_fragments": 73, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiolapillus brandeum", "strain": "strain=Hiromi 1", "accession": "GCA_000828615.1", "taxid": 1076588, "species_taxid": 1076588, "relation_to_type": "type", "validated": true, "ani": 76.6075, "matched_fragments": 84, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio denitrificans", "strain": "strain=ALJD", "accession": "GCA_002000365.1", "taxid": 108003, "species_taxid": 108003, "relation_to_type": "type", "validated": true, "ani": 76.3627, "matched_fragments": 82, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylococcus geothermalis", "strain": "strain=IM1", "accession": "GCA_012769535.1", "taxid": 2681310, "species_taxid": 2681310, "relation_to_type": "type", "validated": true, "ani": 76.3135, "matched_fragments": 63, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiocystis violacea", "strain": "strain=DSM 207", "accession": "GCA_016583575.1", "taxid": 13725, "species_taxid": 13725, "relation_to_type": "type", "validated": true, "ani": 76.2944, "matched_fragments": 87, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas winnipegensis", "strain": "strain=NML 130738", "accession": "GCA_004283755.1", "taxid": 2480810, "species_taxid": 2480810, "relation_to_type": "type", "validated": true, "ani": 76.2842, "matched_fragments": 67, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sedimenticola thiotaurini", "strain": "strain=SIP-G1", "accession": "GCA_001007875.1", "taxid": 1543721, "species_taxid": 1543721, "relation_to_type": "type", "validated": true, "ani": 76.2345, "matched_fragments": 103, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 76.23, "matched_fragments": 65, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidihalobacter prosperus", "strain": "strain=DSM 5130", "accession": "GCA_000754095.2", "taxid": 160660, "species_taxid": 160660, "relation_to_type": "type", "validated": true, "ani": 76.1022, "matched_fragments": 67, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Wenzhouxiangella marina", "strain": "strain=KCTC 42284", "accession": "GCA_001187785.1", "taxid": 1579979, "species_taxid": 1579979, "relation_to_type": "type", "validated": true, "ani": 76.045, "matched_fragments": 50, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Wenzhouxiangella marina", "strain": "strain=DSM 103414", "accession": "GCA_014203035.1", "taxid": 1579979, "species_taxid": 1579979, "relation_to_type": "type", "validated": true, "ani": 76.0119, "matched_fragments": 51, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 75.9282, "matched_fragments": 76, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidoxydans", "strain": "strain=MCCC 1A11059", "accession": "GCA_017868775.1", "taxid": 2733484, "species_taxid": 2733484, "relation_to_type": "type", "validated": true, "ani": 75.9203, "matched_fragments": 92, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.9061, "matched_fragments": 77, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.8896, "matched_fragments": 78, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas mangiferae", "strain": "strain=DMKU BBB3-04", "accession": "GCA_007109405.1", "taxid": 2593654, "species_taxid": 2593654, "relation_to_type": "type", "validated": true, "ani": 75.8583, "matched_fragments": 87, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas taeanensis", "strain": "strain=BH539", "accession": "GCA_900100755.1", "taxid": 284577, "species_taxid": 284577, "relation_to_type": "type", "validated": true, "ani": 75.4369, "matched_fragments": 54, "total_fragments": 810, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000801295.1", "gtdb_species": "s__MONJU sp000801295", "ani": 78.2239, "matched_fragments": 270, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__MONJU", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002020805.1", "gtdb_species": "s__GCF-002020805 sp002020805", "ani": 77.3946, "matched_fragments": 90, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__GCF-002020805", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002009425.1", "gtdb_species": "s__41T-STBD-0c-01a sp002009425", "ani": 77.3781, "matched_fragments": 185, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__41T-STBD-0c-01a", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014762505.1", "gtdb_species": "s__SpSt-1174 sp014762505", "ani": 77.2084, "matched_fragments": 125, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SpSt-1174;f__SpSt-1174;g__SpSt-1174", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003696905.1", "gtdb_species": "s__MONJU sp003696905", "ani": 77.2078, "matched_fragments": 178, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__MONJU", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011051715.1", "gtdb_species": "s__HyVt-443 sp011051715", "ani": 77.0927, "matched_fragments": 140, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__HyVt-443", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003062205.1", "gtdb_species": "s__Sedimenticola_A endophacoides", "ani": 77.0355, "matched_fragments": 133, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Sedimenticola_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.76", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.95", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_003972985.1", "gtdb_species": "s__Thiolapillus sp003972985", "ani": 77.0181, "matched_fragments": 126, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiolapillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.52", "min_intra_species_ani": "99.52", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_009497875.2", "gtdb_species": "s__JADGBD01 sp009497875", "ani": 76.9803, "matched_fragments": 134, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__JADGBD01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008632335.1", "gtdb_species": "s__Thiohalocapsa marina", "ani": 76.9747, "matched_fragments": 130, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiohalocapsa", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000224005.2", "gtdb_species": "s__Marichromatium purpuratum", "ani": 76.9213, "matched_fragments": 135, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Marichromatium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016653295.1", "gtdb_species": "s__Halochromatium salexigens", "ani": 76.8366, "matched_fragments": 89, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Halochromatium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011371455.1", "gtdb_species": "s__DRQN01 sp011371455", "ani": 76.7332, "matched_fragments": 83, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-152;f__SZUA-152;g__DRQN01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.38", "min_intra_species_ani": "97.35", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_018812525.1", "gtdb_species": "s__YD12-FULL-61-37 sp018812525", "ani": 76.6919, "matched_fragments": 103, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__YD12-FULL-61-37", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_011390365.1", "gtdb_species": "s__SLIM01 sp011390365", "ani": 76.6435, "matched_fragments": 104, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__SLIM01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001709035.1", "gtdb_species": "s__Thiodiazotropha endoloripes_B", "ani": 76.5661, "matched_fragments": 61, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.26", "min_intra_species_ani": "97.31", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.86", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCA_011051655.1", "gtdb_species": "s__DRKS01 sp011051655", "ani": 76.5441, "matched_fragments": 117, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__DRKS01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016583835.1", "gtdb_species": "s__Thiococcus pfennigii", "ani": 76.2999, "matched_fragments": 99, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.97", "min_intra_species_ani": "98.97", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009295635.1", "gtdb_species": "s__S0819 sp009295635", "ani": 76.2598, "matched_fragments": 74, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__AK92;g__S0819", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_019100305.1", "gtdb_species": "s__Thiodiazotropha sp019100305", "ani": 76.2277, "matched_fragments": 57, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014873965.1", "gtdb_species": "s__VBDL01 sp014873965", "ani": 75.7968, "matched_fragments": 62, "total_fragments": 810, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__VBDL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }