{ "tc_result": [ { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_003568825.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 98.9826, "matched_fragments": 1226, "total_fragments": 1272, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_000153245.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 98.9794, "matched_fragments": 1229, "total_fragments": 1272, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_002310815.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 98.9776, "matched_fragments": 1224, "total_fragments": 1272, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas ulvae", "strain": "strain=UL12", "accession": "GCA_014925405.1", "taxid": 107327, "species_taxid": 107327, "relation_to_type": "type", "validated": true, "ani": 79.6945, "matched_fragments": 537, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas espejiana", "strain": "strain=NBRC 102222", "accession": "GCA_007989585.1", "taxid": 28107, "species_taxid": 28107, "relation_to_type": "type", "validated": true, "ani": 77.9313, "matched_fragments": 183, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas fuliginea", "strain": "strain=KMM 216", "accession": "GCA_000690055.1", "taxid": 1872678, "species_taxid": 1872678, "relation_to_type": "type", "validated": true, "ani": 77.8071, "matched_fragments": 202, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas arctica", "strain": "strain=A 37-1-2", "accession": "GCA_000238395.4", "taxid": 394751, "species_taxid": 394751, "relation_to_type": "type", "validated": true, "ani": 77.7862, "matched_fragments": 204, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas undina", "strain": "strain=DSM 6065", "accession": "GCA_000238275.4", "taxid": 43660, "species_taxid": 43660, "relation_to_type": "type", "validated": true, "ani": 77.7598, "matched_fragments": 209, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas gelatinilytica", "strain": "strain=NH153", "accession": "GCA_001641615.1", "taxid": 1703256, "species_taxid": 1703256, "relation_to_type": "type", "validated": true, "ani": 77.6398, "matched_fragments": 219, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas tetraodonis", "strain": "strain=GFC", "accession": "GCA_002310835.1", "taxid": 43659, "species_taxid": 43659, "relation_to_type": "suspected-type", "validated": true, "ani": 77.6294, "matched_fragments": 220, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas translucida", "strain": "strain=KMM 520", "accession": "GCA_001465295.1", "taxid": 166935, "species_taxid": 166935, "relation_to_type": "type", "validated": true, "ani": 77.5624, "matched_fragments": 214, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella olleyana", "strain": "strain=LMG 21437", "accession": "GCA_023283825.1", "taxid": 135626, "species_taxid": 135626, "relation_to_type": "type", "validated": true, "ani": 76.4349, "matched_fragments": 62, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Colwellia ponticola", "strain": "strain=OISW-25", "accession": "GCA_005885605.1", "taxid": 2304625, "species_taxid": 2304625, "relation_to_type": "type", "validated": true, "ani": 75.9599, "matched_fragments": 80, "total_fragments": 1272, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.63, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_002310815.1", "gtdb_species": "s__Pseudoalteromonas tunicata", "ani": 98.9776, "matched_fragments": 1224, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_014925405.1", "gtdb_species": "s__Pseudoalteromonas ulvae", "ani": 79.689, "matched_fragments": 537, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "98.81", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001974875.1", "gtdb_species": "s__Pseudoalteromonas sp001974875", "ani": 77.9677, "matched_fragments": 193, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.73", "min_intra_species_ani": "97.18", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002221525.1", "gtdb_species": "s__Pseudoalteromonas espejiana", "ani": 77.9462, "matched_fragments": 193, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001653135.1", "gtdb_species": "s__Pseudoalteromonas neustonica", "ani": 77.9266, "matched_fragments": 233, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.11", "min_intra_species_ani": "98.62", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000238355.1", "gtdb_species": "s__Pseudoalteromonas haloplanktis", "ani": 77.922, "matched_fragments": 219, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.55", "min_intra_species_ani": "99.12", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001469895.1", "gtdb_species": "s__Pseudoalteromonas sp001469895", "ani": 77.8477, "matched_fragments": 207, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 96.7314, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000238395.3", "gtdb_species": "s__Pseudoalteromonas arctica", "ani": 77.7547, "matched_fragments": 206, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.91", "min_intra_species_ani": "96.03", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.80", "num_clustered_genomes": 33, "status": "-" }, { "accession": "GCA_018402495.1", "gtdb_species": "s__Pseudoalteromonas sp018402495", "ani": 77.75, "matched_fragments": 211, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001306915.1", "gtdb_species": "s__Pseudoalteromonas lipolytica_A", "ani": 77.7416, "matched_fragments": 203, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.22", "min_intra_species_ani": "97.66", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_004328665.1", "gtdb_species": "s__Pseudoalteromonas sp001974855", "ani": 77.74, "matched_fragments": 215, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.16", "min_intra_species_ani": "95.35", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000238275.3", "gtdb_species": "s__Pseudoalteromonas undina", "ani": 77.7298, "matched_fragments": 211, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.26", "min_intra_species_ani": "96.09", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_000498095.1", "gtdb_species": "s__Pseudoalteromonas sp000498095", "ani": 77.7036, "matched_fragments": 203, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.86", "min_intra_species_ani": "97.76", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.87", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001469215.1", "gtdb_species": "s__Pseudoalteromonas sp001469215", "ani": 77.6785, "matched_fragments": 217, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002165575.1", "gtdb_species": "s__Pseudoalteromonas sp002165575", "ani": 77.6761, "matched_fragments": 212, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018100985.1", "gtdb_species": "s__Pseudoalteromonas sp018100985", "ani": 77.6733, "matched_fragments": 200, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.38", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900239935.1", "gtdb_species": "s__Pseudoalteromonas carrageenovora", "ani": 77.6621, "matched_fragments": 213, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "96.44", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.91", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_900116435.1", "gtdb_species": "s__Pseudoalteromonas lipolytica", "ani": 77.6591, "matched_fragments": 202, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.07", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.86", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_001641615.1", "gtdb_species": "s__Pseudoalteromonas gelatinilytica", "ani": 77.6439, "matched_fragments": 218, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.27", "min_intra_species_ani": "97.45", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_002310835.1", "gtdb_species": "s__Pseudoalteromonas tetraodonis", "ani": 77.6438, "matched_fragments": 219, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.76", "min_intra_species_ani": "96.28", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.84", "num_clustered_genomes": 28, "status": "-" }, { "accession": "GCF_011378855.1", "gtdb_species": "s__Pseudoalteromonas sp011378855", "ani": 77.593, "matched_fragments": 215, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.10", "min_intra_species_ani": "97.06", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001465295.1", "gtdb_species": "s__Pseudoalteromonas translucida", "ani": 77.5624, "matched_fragments": 214, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 96.0242, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000238335.3", "gtdb_species": "s__Pseudoalteromonas marina", "ani": 77.3814, "matched_fragments": 185, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.76", "min_intra_species_ani": "97.57", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_000788395.1", "gtdb_species": "s__Pseudoalteromonas piratica", "ani": 77.3168, "matched_fragments": 191, "total_fragments": 1272, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }