{ "tc_result": [ { "organism_name": "Shewanella baltica", "strain": "strain=NCTC10735", "accession": "GCA_900456975.1", "taxid": 62322, "species_taxid": 62322, "relation_to_type": "type", "validated": true, "ani": 78.9826, "matched_fragments": 350, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella hafniensis", "strain": "strain=ATCC BAA-1207", "accession": "GCA_019655335.1", "taxid": 365590, "species_taxid": 365590, "relation_to_type": "type", "validated": true, "ani": 78.8254, "matched_fragments": 336, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella oncorhynchi", "strain": "strain=S-1", "accession": "GCA_012584455.1", "taxid": 2726434, "species_taxid": 2726434, "relation_to_type": "type", "validated": true, "ani": 78.7494, "matched_fragments": 317, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella profunda", "strain": "strain=DSM 15900", "accession": "GCA_023283765.1", "taxid": 254793, "species_taxid": 254793, "relation_to_type": "type", "validated": true, "ani": 78.5311, "matched_fragments": 288, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella glacialipiscicola", "strain": "strain=LMG 23744", "accession": "GCA_023283485.1", "taxid": 614069, "species_taxid": 614069, "relation_to_type": "type", "validated": true, "ani": 78.4264, "matched_fragments": 266, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella glacialipiscicola", "strain": "strain=T147", "accession": "GCA_019655235.1", "taxid": 614069, "species_taxid": 614069, "relation_to_type": "type", "validated": true, "ani": 78.3834, "matched_fragments": 250, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella putrefaciens", "strain": "strain=ATCC 8071", "accession": "GCA_016406325.1", "taxid": 24, "species_taxid": 24, "relation_to_type": "type", "validated": true, "ani": 78.1701, "matched_fragments": 296, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella putrefaciens", "strain": "strain=JCM 20190", "accession": "GCA_014647555.1", "taxid": 24, "species_taxid": 24, "relation_to_type": "type", "validated": true, "ani": 78.1374, "matched_fragments": 300, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella putrefaciens", "strain": "strain=NBRC 3908", "accession": "GCA_001591325.1", "taxid": 24, "species_taxid": 24, "relation_to_type": "type", "validated": true, "ani": 78.1371, "matched_fragments": 296, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella seohaensis", "strain": "strain=CCUG 60900", "accession": "GCA_023283775.1", "taxid": 755175, "species_taxid": 755175, "relation_to_type": "type", "validated": true, "ani": 78.0488, "matched_fragments": 319, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella seohaensis", "strain": "strain=KCTC 23556", "accession": "GCA_025449215.1", "taxid": 755175, "species_taxid": 755175, "relation_to_type": "type", "validated": true, "ani": 77.6715, "matched_fragments": 315, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella saliphila", "strain": "strain=KCTC 62131", "accession": "GCA_023283695.1", "taxid": 2282698, "species_taxid": 2282698, "relation_to_type": "type", "validated": true, "ani": 77.2251, "matched_fragments": 173, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella saliphila", "strain": "strain=JCM 32304", "accession": "GCA_014648295.1", "taxid": 2282698, "species_taxid": 2282698, "relation_to_type": "type", "validated": true, "ani": 77.2126, "matched_fragments": 172, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella algicola", "strain": "strain=JCM 31091", "accession": "GCA_014648035.1", "taxid": 640633, "species_taxid": 640633, "relation_to_type": "type", "validated": true, "ani": 77.2123, "matched_fragments": 179, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parashewanella curva", "strain": "strain=C51", "accession": "GCA_003675895.1", "taxid": 2338552, "species_taxid": 2338552, "relation_to_type": "type", "validated": true, "ani": 76.841, "matched_fragments": 54, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella kaireitica", "strain": "strain=DSM 17170", "accession": "GCA_023284045.1", "taxid": 212021, "species_taxid": 212021, "relation_to_type": "type", "validated": true, "ani": 76.7797, "matched_fragments": 126, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella piezotolerans", "strain": "strain=WP3", "accession": "GCA_000014885.1", "taxid": 404011, "species_taxid": 404011, "relation_to_type": "type", "validated": true, "ani": 76.7742, "matched_fragments": 121, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella schlegeliana", "strain": "strain=LMG 21406", "accession": "GCA_023283605.1", "taxid": 190308, "species_taxid": 190308, "relation_to_type": "type", "validated": true, "ani": 76.4358, "matched_fragments": 143, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella nanhaiensis", "strain": "strain=NR704-98", "accession": "GCA_019457885.1", "taxid": 2864872, "species_taxid": 2864872, "relation_to_type": "type", "validated": true, "ani": 76.199, "matched_fragments": 121, "total_fragments": 1024, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 31.25, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900456975.1", "gtdb_species": "s__Shewanella baltica", "ani": 78.9898, "matched_fragments": 350, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.88", "min_intra_species_ani": "96.32", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.85", "num_clustered_genomes": 16, "status": "-" }, { "accession": "GCF_002838165.1", "gtdb_species": "s__Shewanella sp002838165", "ani": 78.8447, "matched_fragments": 343, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.37", "min_intra_species_ani": "97.32", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002966515.1", "gtdb_species": "s__Shewanella sp002966515", "ani": 78.7104, "matched_fragments": 316, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.53", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.86", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCA_002783505.1", "gtdb_species": "s__Shewanella sp002783505", "ani": 78.6884, "matched_fragments": 309, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016406305.1", "gtdb_species": "s__Shewanella putrefaciens_C", "ani": 78.5919, "matched_fragments": 311, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016406325.1", "gtdb_species": "s__Shewanella putrefaciens", "ani": 78.1701, "matched_fragments": 296, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.29", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_000203935.1", "gtdb_species": "s__Shewanella sp000203935", "ani": 78.0965, "matched_fragments": 320, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.76", "min_intra_species_ani": "95.76", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000485795.1", "gtdb_species": "s__Shewanella decolorationis", "ani": 78.0533, "matched_fragments": 314, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.60", "min_intra_species_ani": "97.51", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002216875.1", "gtdb_species": "s__Shewanella bicestrii", "ani": 78.0298, "matched_fragments": 331, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.51", "min_intra_species_ani": "96.32", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_014647135.1", "gtdb_species": "s__Shewanella xiamenensis", "ani": 78.0155, "matched_fragments": 300, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.56", "min_intra_species_ani": "97.34", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_014648035.1", "gtdb_species": "s__Shewanella algicola", "ani": 77.2123, "matched_fragments": 179, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.1181, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014648295.1", "gtdb_species": "s__Shewanella saliphila", "ani": 77.1961, "matched_fragments": 173, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.1181, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011765625.1", "gtdb_species": "s__Shewanella aestuarii_A", "ani": 77.1108, "matched_fragments": 139, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006385555.1", "gtdb_species": "s__Shewanella polaris", "ani": 77.0954, "matched_fragments": 162, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.84", "min_intra_species_ani": "97.84", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009663145.1", "gtdb_species": "s__Shewanella sp009663145", "ani": 76.9163, "matched_fragments": 131, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003675895.1", "gtdb_species": "s__Parashewanella curva", "ani": 76.8741, "matched_fragments": 55, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Parashewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002873615.1", "gtdb_species": "s__Shewanella sp002873615", "ani": 76.8045, "matched_fragments": 148, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003605125.1", "gtdb_species": "s__Shewanella algidipiscicola", "ani": 76.7769, "matched_fragments": 153, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.64", "min_intra_species_ani": "98.64", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000014885.1", "gtdb_species": "s__Shewanella piezotolerans", "ani": 76.7742, "matched_fragments": 121, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019209865.1", "gtdb_species": "s__Shewanella sp019209865", "ani": 76.6932, "matched_fragments": 112, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016765635.1", "gtdb_species": "s__Shewanella schlegeliana", "ani": 76.4236, "matched_fragments": 144, "total_fragments": 1024, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }