{ "tc_result": [ { "organism_name": "Shewanella glacialimarina", "strain": "strain=TZS-4", "accession": "GCA_020511155.1", "taxid": 2590884, "species_taxid": 2590884, "relation_to_type": "type", "validated": true, "ani": 95.4376, "matched_fragments": 1177, "total_fragments": 1349, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Shewanella aestuarii", "strain": "strain=JCM 17801", "accession": "GCA_014647215.1", "taxid": 1028752, "species_taxid": 1028752, "relation_to_type": "type", "validated": true, "ani": 82.1158, "matched_fragments": 831, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella aestuarii", "strain": "strain=JCM 17801", "accession": "GCA_023283685.1", "taxid": 1028752, "species_taxid": 1028752, "relation_to_type": "type", "validated": true, "ani": 82.0982, "matched_fragments": 840, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella vesiculosa", "strain": "strain=LMG 24424", "accession": "GCA_003797885.1", "taxid": 518738, "species_taxid": 518738, "relation_to_type": "type", "validated": true, "ani": 79.8227, "matched_fragments": 485, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella vesiculosa", "strain": "strain=M7", "accession": "GCA_021560015.1", "taxid": 518738, "species_taxid": 518738, "relation_to_type": "type", "validated": true, "ani": 79.814, "matched_fragments": 475, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella livingstonensis", "strain": "strain=LMG 19866", "accession": "GCA_003855395.1", "taxid": 150120, "species_taxid": 150120, "relation_to_type": "type", "validated": true, "ani": 79.6611, "matched_fragments": 524, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella ulleungensis", "strain": "strain=KCTC 62130", "accession": "GCA_023283965.1", "taxid": 2282699, "species_taxid": 2282699, "relation_to_type": "type", "validated": true, "ani": 79.6575, "matched_fragments": 473, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella litoralis", "strain": "strain=JCM 32306", "accession": "GCA_009828585.1", "taxid": 2282700, "species_taxid": 2282700, "relation_to_type": "type", "validated": true, "ani": 79.3836, "matched_fragments": 493, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella saliphila", "strain": "strain=KCTC 62131", "accession": "GCA_023283695.1", "taxid": 2282698, "species_taxid": 2282698, "relation_to_type": "type", "validated": true, "ani": 79.3433, "matched_fragments": 476, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella inventionis", "strain": "strain=CGMCC 1.15339", "accession": "GCA_014641855.1", "taxid": 1738770, "species_taxid": 1738770, "relation_to_type": "type", "validated": true, "ani": 79.3012, "matched_fragments": 490, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella polaris", "strain": "strain=SM1901", "accession": "GCA_006385555.1", "taxid": 2588449, "species_taxid": 2588449, "relation_to_type": "type", "validated": true, "ani": 79.2931, "matched_fragments": 475, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella saliphila", "strain": "strain=JCM 32304", "accession": "GCA_014648295.1", "taxid": 2282698, "species_taxid": 2282698, "relation_to_type": "type", "validated": true, "ani": 79.2476, "matched_fragments": 480, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella inventionis", "strain": "strain=KCTC 42807", "accession": "GCA_023283595.1", "taxid": 1738770, "species_taxid": 1738770, "relation_to_type": "type", "validated": true, "ani": 79.2386, "matched_fragments": 482, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella basaltis", "strain": "strain=KCTC 22121", "accession": "GCA_023283885.1", "taxid": 472183, "species_taxid": 472183, "relation_to_type": "type", "validated": true, "ani": 78.9684, "matched_fragments": 485, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella electrodiphila", "strain": "strain=DSM 24955", "accession": "GCA_023283985.1", "taxid": 934143, "species_taxid": 934143, "relation_to_type": "type", "validated": true, "ani": 78.4592, "matched_fragments": 352, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella intestini", "strain": "strain=MCCC 1A01895", "accession": "GCA_018221465.1", "taxid": 2017544, "species_taxid": 2017544, "relation_to_type": "type", "validated": true, "ani": 78.1027, "matched_fragments": 330, "total_fragments": 1349, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014647215.1", "gtdb_species": "s__Shewanella aestuarii", "ani": 82.1249, "matched_fragments": 830, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003797885.1", "gtdb_species": "s__Shewanella vesiculosa", "ani": 79.8221, "matched_fragments": 485, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.48", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.86", "num_clustered_genomes": 17, "status": "-" }, { "accession": "GCF_010092445.1", "gtdb_species": "s__Shewanella sp002836315", "ani": 79.679, "matched_fragments": 502, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.47", "min_intra_species_ani": "98.34", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003855395.1", "gtdb_species": "s__Shewanella livingstonensis", "ani": 79.6659, "matched_fragments": 524, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014164505.1", "gtdb_species": "s__Shewanella sp014164505", "ani": 79.6594, "matched_fragments": 406, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014648315.1", "gtdb_species": "s__Shewanella ulleungensis", "ani": 79.6077, "matched_fragments": 474, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011765625.1", "gtdb_species": "s__Shewanella aestuarii_A", "ani": 79.6052, "matched_fragments": 584, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003797125.1", "gtdb_species": "s__Shewanella frigidimarina", "ani": 79.5896, "matched_fragments": 512, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.50", "min_intra_species_ani": "96.12", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_014648035.1", "gtdb_species": "s__Shewanella algicola", "ani": 79.4695, "matched_fragments": 467, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.1181, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009828585.1", "gtdb_species": "s__Shewanella litoralis", "ani": 79.3836, "matched_fragments": 493, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014641855.1", "gtdb_species": "s__Shewanella inventionis", "ani": 79.311, "matched_fragments": 489, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006385555.1", "gtdb_species": "s__Shewanella polaris", "ani": 79.2929, "matched_fragments": 475, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.84", "min_intra_species_ani": "97.84", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014648295.1", "gtdb_species": "s__Shewanella saliphila", "ani": 79.2677, "matched_fragments": 478, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.1181, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009663145.1", "gtdb_species": "s__Shewanella sp009663145", "ani": 78.5281, "matched_fragments": 312, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000013765.1", "gtdb_species": "s__Shewanella denitrificans", "ani": 78.4631, "matched_fragments": 287, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018221465.1", "gtdb_species": "s__Shewanella intestini", "ani": 78.1056, "matched_fragments": 329, "total_fragments": 1349, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }