{ "tc_result": [ { "organism_name": "Vibrio gallaecicus", "strain": "strain=VB 8.9", "accession": "GCA_013416885.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 98.2709, "matched_fragments": 196, "total_fragments": 202, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio gallaecicus", "strain": "strain=DSM 23502", "accession": "GCA_005281825.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 98.2709, "matched_fragments": 196, "total_fragments": 202, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio gallaecicus", "strain": "strain=CECT 7244", "accession": "GCA_024347495.1", "taxid": 552386, "species_taxid": 552386, "relation_to_type": "type", "validated": true, "ani": 98.1858, "matched_fragments": 196, "total_fragments": 202, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Vibrio splendidus", "strain": "strain=LMG 19031", "accession": "GCA_024347615.1", "taxid": 29497, "species_taxid": 29497, "relation_to_type": "type", "validated": true, "ani": 86.1152, "matched_fragments": 155, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio bathopelagicus", "strain": "strain=Sal10", "accession": "GCA_014879975.1", "taxid": 2777577, "species_taxid": 2777577, "relation_to_type": "type", "validated": true, "ani": 85.8628, "matched_fragments": 153, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio tasmaniensis", "strain": "strain=LMG 20012", "accession": "GCA_024347635.1", "taxid": 212663, "species_taxid": 212663, "relation_to_type": "suspected-type", "validated": true, "ani": 85.8021, "matched_fragments": 153, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio atlanticus", "strain": "strain=CECT 7223", "accession": "GCA_024347315.1", "taxid": 693153, "species_taxid": 693153, "relation_to_type": "type", "validated": true, "ani": 85.5586, "matched_fragments": 157, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio atlanticus", "strain": "strain=CECT 7223", "accession": "GCA_900089855.1", "taxid": 693153, "species_taxid": 693153, "relation_to_type": "type", "validated": true, "ani": 85.557, "matched_fragments": 153, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio cyclitrophicus", "strain": "strain=LMG 21359", "accession": "GCA_024347435.1", "taxid": 47951, "species_taxid": 47951, "relation_to_type": "type", "validated": true, "ani": 85.3508, "matched_fragments": 157, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio kanaloae", "strain": "strain=LMG 20539", "accession": "GCA_024347535.1", "taxid": 170673, "species_taxid": 170673, "relation_to_type": "type", "validated": true, "ani": 85.2424, "matched_fragments": 152, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vibrio profundi", "strain": "strain=TP187", "accession": "GCA_005281835.1", "taxid": 1774960, "species_taxid": 1774960, "relation_to_type": "type", "validated": true, "ani": 83.6543, "matched_fragments": 139, "total_fragments": 202, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 50.38, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_005281825.1", "gtdb_species": "s__Vibrio gallaecicus", "ani": 98.2709, "matched_fragments": 196, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_013114625.1", "gtdb_species": "s__Vibrio sp013114625", "ani": 92.9461, "matched_fragments": 188, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014879975.1", "gtdb_species": "s__Vibrio bathopelagicus", "ani": 85.8628, "matched_fragments": 153, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006333845.1", "gtdb_species": "s__Vibrio tasmaniensis", "ani": 85.8279, "matched_fragments": 150, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.02", "min_intra_species_ani": "95.02", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001557875.1", "gtdb_species": "s__Vibrio splendidus_F", "ani": 85.7324, "matched_fragments": 155, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.50", "min_intra_species_ani": "97.50", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014878155.1", "gtdb_species": "s__Vibrio lentus", "ani": 85.7178, "matched_fragments": 159, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.60", "min_intra_species_ani": "95.56", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 91, "status": "-" }, { "accession": "GCF_002875945.1", "gtdb_species": "s__Vibrio lentus_A", "ani": 85.7165, "matched_fragments": 162, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000272405.2", "gtdb_species": "s__Vibrio tasmaniensis_A", "ani": 85.5971, "matched_fragments": 151, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.5791, "mean_intra_species_ani": "97.23", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.85", "num_clustered_genomes": 20, "status": "-" }, { "accession": "GCF_900089855.1", "gtdb_species": "s__Vibrio atlanticus", "ani": 85.557, "matched_fragments": 153, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 96.5791, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002875705.1", "gtdb_species": "s__Vibrio sp002875705", "ani": 85.4493, "matched_fragments": 154, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.66", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_004764665.1", "gtdb_species": "s__Vibrio echinoideorum", "ani": 85.4174, "matched_fragments": 156, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.40", "min_intra_species_ani": "96.83", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.82", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_008801285.1", "gtdb_species": "s__Vibrio kanaloae", "ani": 85.2685, "matched_fragments": 151, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.372, "mean_intra_species_ani": "98.50", "min_intra_species_ani": "98.26", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 16, "status": "-" }, { "accession": "GCF_005144905.1", "gtdb_species": "s__Vibrio cyclitrophicus", "ani": 85.2415, "matched_fragments": 157, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.18", "min_intra_species_ani": "99.01", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 87, "status": "-" }, { "accession": "GCF_002954585.1", "gtdb_species": "s__Vibrio chagasii_A", "ani": 84.5424, "matched_fragments": 151, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.42", "min_intra_species_ani": "95.44", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_005281835.1", "gtdb_species": "s__Vibrio profundi", "ani": 83.6543, "matched_fragments": 139, "total_fragments": 202, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }