{ "tc_result": [ { "organism_name": "Polycyclovorans algicola", "strain": "strain=TG408", "accession": "GCA_000711245.1", "taxid": 616992, "species_taxid": 616992, "relation_to_type": "type", "validated": true, "ani": 82.424, "matched_fragments": 673, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flagellatimonas centrodinii", "strain": "strain=R2A-3", "accession": "GCA_016918765.2", "taxid": 2806210, "species_taxid": 2806210, "relation_to_type": "type", "validated": true, "ani": 79.0504, "matched_fragments": 350, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas fluminis", "strain": "strain=HR-BB", "accession": "GCA_002930645.1", "taxid": 2086571, "species_taxid": 2086571, "relation_to_type": "type", "validated": true, "ani": 77.8234, "matched_fragments": 326, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas variicoloris", "strain": "strain=DSM 15731", "accession": "GCA_000382285.1", "taxid": 254408, "species_taxid": 254408, "relation_to_type": "type", "validated": true, "ani": 77.6432, "matched_fragments": 275, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas soli", "strain": "strain=DSM 21787", "accession": "GCA_000474945.1", "taxid": 413479, "species_taxid": 413479, "relation_to_type": "type", "validated": true, "ani": 77.5551, "matched_fragments": 292, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas flava", "strain": "strain=DSM 18980", "accession": "GCA_000426685.1", "taxid": 415849, "species_taxid": 415849, "relation_to_type": "type", "validated": true, "ani": 77.4602, "matched_fragments": 280, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas marina", "strain": "strain=C16B3", "accession": "GCA_012241385.1", "taxid": 2714601, "species_taxid": 2714601, "relation_to_type": "type", "validated": true, "ani": 77.4063, "matched_fragments": 250, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas terrae", "strain": "strain=KIS83-12", "accession": "GCA_011067135.1", "taxid": 1396819, "species_taxid": 1396819, "relation_to_type": "type", "validated": true, "ani": 77.3554, "matched_fragments": 215, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrocarboniphaga effusa", "strain": "strain=AP103", "accession": "GCA_000271305.1", "taxid": 243629, "species_taxid": 243629, "relation_to_type": "type", "validated": true, "ani": 77.2669, "matched_fragments": 247, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrocarboniphaga daqingensis", "strain": "strain=CGMCC 1.7049", "accession": "GCA_900129825.1", "taxid": 490188, "species_taxid": 490188, "relation_to_type": "type", "validated": true, "ani": 77.2604, "matched_fragments": 219, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algiphilus aromaticivorans", "strain": "strain=DG1253", "accession": "GCA_000733765.1", "taxid": 382454, "species_taxid": 382454, "relation_to_type": "type", "validated": true, "ani": 76.7804, "matched_fragments": 186, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas benzenivorans", "strain": "strain=DSM 8628", "accession": "GCA_900100495.1", "taxid": 556533, "species_taxid": 556533, "relation_to_type": "type", "validated": true, "ani": 76.7544, "matched_fragments": 145, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=LMG 941", "accession": "GCA_000263335.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 76.5776, "matched_fragments": 118, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas broegbernensis", "strain": "strain=DSM 12573", "accession": "GCA_010093165.1", "taxid": 83619, "species_taxid": 83619, "relation_to_type": "type", "validated": true, "ani": 76.4057, "matched_fragments": 137, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas lumbrici", "strain": "strain=1.1416", "accession": "GCA_006476065.1", "taxid": 2559601, "species_taxid": 2559601, "relation_to_type": "type", "validated": true, "ani": 76.3251, "matched_fragments": 124, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium tengchongense", "strain": "strain=DSM 25623", "accession": "GCA_003814555.1", "taxid": 1273429, "species_taxid": 1273429, "relation_to_type": "type", "validated": true, "ani": 76.3112, "matched_fragments": 148, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 76.2878, "matched_fragments": 140, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas broegbernensis", "strain": "strain=DSM 12573", "accession": "GCA_014202435.1", "taxid": 83619, "species_taxid": 83619, "relation_to_type": "type", "validated": true, "ani": 76.2713, "matched_fragments": 136, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas caeni", "strain": "strain=z29", "accession": "GCA_003024235.1", "taxid": 2058085, "species_taxid": 2058085, "relation_to_type": "type", "validated": true, "ani": 76.2215, "matched_fragments": 147, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas wenzhouensis", "strain": "strain=YD-1", "accession": "GCA_007859305.1", "taxid": 2599615, "species_taxid": 2599615, "relation_to_type": "type", "validated": true, "ani": 76.1374, "matched_fragments": 152, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=LMG9322", "accession": "GCA_002018575.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "suspected-type", "validated": true, "ani": 76.0981, "matched_fragments": 116, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dyella telluris", "strain": "strain=G9", "accession": "GCA_014297575.1", "taxid": 2763498, "species_taxid": 2763498, "relation_to_type": "type", "validated": true, "ani": 76.0721, "matched_fragments": 109, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas alcaligenes", "strain": "strain=NBRC 14159", "accession": "GCA_000467105.1", "taxid": 43263, "species_taxid": 43263, "relation_to_type": "type", "validated": true, "ani": 76.0218, "matched_fragments": 144, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas alcaligenes", "strain": "strain=NCTC10367", "accession": "GCA_900455475.1", "taxid": 43263, "species_taxid": 43263, "relation_to_type": "type", "validated": true, "ani": 76.0086, "matched_fragments": 142, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera shabanensis", "strain": "strain=E1L3A", "accession": "GCA_000215955.3", "taxid": 180542, "species_taxid": 180542, "relation_to_type": "type", "validated": true, "ani": 76.007, "matched_fragments": 78, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=CFBP 2526", "accession": "GCA_000495275.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 75.9794, "matched_fragments": 105, "total_fragments": 995, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002706265.1", "gtdb_species": "s__Polycyclovorans sp002706265", "ani": 99.962, "matched_fragments": 965, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Polycyclovorans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.22", "min_intra_species_ani": "98.54", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.78", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_000711245.1", "gtdb_species": "s__Polycyclovorans algicola", "ani": 82.4356, "matched_fragments": 672, "total_fragments": 995, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Stagnimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.89", "min_intra_species_ani": "99.89", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003428335.1", "gtdb_species": "s__Solimonas_A sp003428335", "ani": 77.7368, "matched_fragments": 318, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003730135.1", "gtdb_species": "s__Stagnimonas aquatica", "ani": 77.6889, "matched_fragments": 291, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Stagnimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003201205.1", "gtdb_species": "s__Sinimarinibacterium flocculans", "ani": 77.6065, "matched_fragments": 289, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Sinimarinibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000426685.1", "gtdb_species": "s__Solimonas flava", "ani": 77.4311, "matched_fragments": 283, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas", "ani_circumscription_radius": 95.0372, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011067135.1", "gtdb_species": "s__Solimonas terrae", "ani": 77.3685, "matched_fragments": 214, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000271305.1", "gtdb_species": "s__Hydrocarboniphaga effusa", "ani": 77.2675, "matched_fragments": 247, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Hydrocarboniphaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017305095.1", "gtdb_species": "s__Thermomonas sp017305095", "ani": 76.7821, "matched_fragments": 137, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Thermomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000733765.1", "gtdb_species": "s__Algiphilus aromaticivorans", "ani": 76.7804, "matched_fragments": 186, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Algiphilaceae;g__Algiphilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003505795.1", "gtdb_species": "s__UBA8801 sp003505795", "ani": 76.2478, "matched_fragments": 114, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__UBA8801", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000467105.1", "gtdb_species": "s__Pseudomonas_E alcaligenes", "ani": 76.0265, "matched_fragments": 145, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.23", "min_intra_species_ani": "96.43", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.81", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_014199795.1", "gtdb_species": "s__Xanthomonas_A sp014199795", "ani": 76.0126, "matched_fragments": 173, "total_fragments": 995, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Xanthomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.15", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 4, "status": "-" } ] }