{ "tc_result": [ { "organism_name": "Abyssibacter profundi", "strain": "strain=OUC007", "accession": "GCA_003151135.1", "taxid": 2182787, "species_taxid": 2182787, "relation_to_type": "type", "validated": true, "ani": 79.525, "matched_fragments": 524, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanococcus atlanticus", "strain": "strain=22II-S10r2", "accession": "GCA_002088235.1", "taxid": 1317117, "species_taxid": 1317117, "relation_to_type": "type", "validated": true, "ani": 77.08, "matched_fragments": 100, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio thiocyanoxidans", "strain": "strain=ARh2", "accession": "GCA_000385215.1", "taxid": 152475, "species_taxid": 152475, "relation_to_type": "type", "validated": true, "ani": 76.873, "matched_fragments": 57, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera japonica", "strain": "strain=YTM-1", "accession": "GCA_003788585.1", "taxid": 1304270, "species_taxid": 1304270, "relation_to_type": "type", "validated": true, "ani": 76.472, "matched_fragments": 64, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio versutus", "strain": "strain=AL 2", "accession": "GCA_001999325.1", "taxid": 106634, "species_taxid": 106634, "relation_to_type": "type", "validated": true, "ani": 76.3752, "matched_fragments": 68, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrocarboniphaga effusa", "strain": "strain=AP103", "accession": "GCA_000271305.1", "taxid": 243629, "species_taxid": 243629, "relation_to_type": "type", "validated": true, "ani": 76.3515, "matched_fragments": 121, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas soli", "strain": "strain=DSM 21787", "accession": "GCA_000474945.1", "taxid": 413479, "species_taxid": 413479, "relation_to_type": "type", "validated": true, "ani": 76.256, "matched_fragments": 139, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Algiphilus aromaticivorans", "strain": "strain=DG1253", "accession": "GCA_000733765.1", "taxid": 382454, "species_taxid": 382454, "relation_to_type": "type", "validated": true, "ani": 76.2245, "matched_fragments": 109, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas variicoloris", "strain": "strain=DSM 15731", "accession": "GCA_000382285.1", "taxid": 254408, "species_taxid": 254408, "relation_to_type": "type", "validated": true, "ani": 76.2231, "matched_fragments": 152, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azonexus hydrophilus", "strain": "strain=DSM 23864", "accession": "GCA_000429605.1", "taxid": 418702, "species_taxid": 418702, "relation_to_type": "type", "validated": true, "ani": 76.1922, "matched_fragments": 50, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polycyclovorans algicola", "strain": "strain=TG408", "accession": "GCA_000711245.1", "taxid": 616992, "species_taxid": 616992, "relation_to_type": "type", "validated": true, "ani": 76.1324, "matched_fragments": 83, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera halophila", "strain": "strain=YIM 95161", "accession": "GCA_003732545.1", "taxid": 1304158, "species_taxid": 1304158, "relation_to_type": "type", "validated": true, "ani": 76.1206, "matched_fragments": 111, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera orenii", "strain": "strain=MK-B5", "accession": "GCA_003788635.1", "taxid": 856731, "species_taxid": 856731, "relation_to_type": "type", "validated": true, "ani": 76.0785, "matched_fragments": 116, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halochromatium roseum", "strain": "strain=DSM 18859", "accession": "GCA_016653315.1", "taxid": 391920, "species_taxid": 391920, "relation_to_type": "type", "validated": true, "ani": 76.0447, "matched_fragments": 52, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nevskia soli", "strain": "strain=DSM 19509", "accession": "GCA_000711955.1", "taxid": 418856, "species_taxid": 418856, "relation_to_type": "type", "validated": true, "ani": 76.0157, "matched_fragments": 136, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalbus denitrificans", "strain": "strain=DSM 26407", "accession": "GCA_003337735.1", "taxid": 547122, "species_taxid": 547122, "relation_to_type": "type", "validated": true, "ani": 76.0051, "matched_fragments": 71, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera shabanensis", "strain": "strain=E1L3A", "accession": "GCA_000215955.3", "taxid": 180542, "species_taxid": 180542, "relation_to_type": "type", "validated": true, "ani": 75.9842, "matched_fragments": 80, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azonexus fungiphilus", "strain": "strain=DSM 23841", "accession": "GCA_003634965.1", "taxid": 146940, "species_taxid": 146940, "relation_to_type": "type", "validated": true, "ani": 75.8433, "matched_fragments": 62, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioflavicoccus mobilis", "strain": "strain=8321", "accession": "GCA_000327045.1", "taxid": 80679, "species_taxid": 80679, "relation_to_type": "type", "validated": true, "ani": 75.8283, "matched_fragments": 56, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 75.7958, "matched_fragments": 85, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.7514, "matched_fragments": 83, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.7246, "matched_fragments": 85, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidivorans", "strain": "strain=MCCC 1A13718", "accession": "GCA_017868935.1", "taxid": 2733488, "species_taxid": 2733488, "relation_to_type": "type", "validated": true, "ani": 75.5491, "matched_fragments": 75, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas antri", "strain": "strain=Y3S6", "accession": "GCA_019430905.1", "taxid": 2846777, "species_taxid": 2846777, "relation_to_type": "type", "validated": true, "ani": 75.4518, "matched_fragments": 72, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas chlororaphis subsp. chlororaphis", "strain": "strain=LMG 5004", "accession": "GCA_001269625.1", "taxid": 333, "species_taxid": 587753, "relation_to_type": "type", "validated": true, "ani": 75.4288, "matched_fragments": 73, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas chlororaphis subsp. chlororaphis", "strain": "strain=DSM 50083", "accession": "GCA_007858335.1", "taxid": 333, "species_taxid": 587753, "relation_to_type": "type", "validated": true, "ani": 75.4262, "matched_fragments": 73, "total_fragments": 1110, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_003151135.1", "gtdb_species": "s__Abyssibacter profundi", "ani": 79.5337, "matched_fragments": 523, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__OUC007;g__Abyssibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.39", "min_intra_species_ani": "98.39", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018222345.1", "gtdb_species": "s__JAAFAL01 sp018222345", "ani": 77.6072, "matched_fragments": 147, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__OUC007;g__JAAFAL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002088235.1", "gtdb_species": "s__Oceanococcus atlanticus", "ani": 77.08, "matched_fragments": 100, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Oceanococcaceae;g__Oceanococcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.37", "min_intra_species_ani": "98.37", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000378305.1", "gtdb_species": "s__Thioalkalivibrio sp000378305", "ani": 76.637, "matched_fragments": 56, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.92", "min_intra_species_ani": "98.55", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_000377785.1", "gtdb_species": "s__Thioalkalivibrio sp000377785", "ani": 76.6196, "matched_fragments": 62, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002699185.1", "gtdb_species": "s__Thiohalobacter sp002699185", "ani": 76.5391, "matched_fragments": 54, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000381945.1", "gtdb_species": "s__Thioalkalivibrio sp000381945", "ani": 76.3842, "matched_fragments": 67, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000025545.1", "gtdb_species": "s__Thioalkalivibrio sp000025545", "ani": 76.3679, "matched_fragments": 64, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.34", "min_intra_species_ani": "97.34", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000271305.1", "gtdb_species": "s__Hydrocarboniphaga effusa", "ani": 76.3648, "matched_fragments": 120, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Hydrocarboniphaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008012115.1", "gtdb_species": "s__Stenotrophobium sp008012115", "ani": 76.3062, "matched_fragments": 107, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Stenotrophobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000382285.1", "gtdb_species": "s__Solimonas variicoloris", "ani": 76.2231, "matched_fragments": 152, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas", "ani_circumscription_radius": 95.0372, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000429605.1", "gtdb_species": "s__Azonexus hydrophilus", "ani": 76.1922, "matched_fragments": 50, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.24", "min_intra_species_ani": "97.24", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000711245.1", "gtdb_species": "s__Polycyclovorans algicola", "ani": 76.1324, "matched_fragments": 83, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Polycyclovorans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007126095.1", "gtdb_species": "s__Aquisalimonas sp007126095", "ani": 76.0931, "matched_fragments": 56, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.75", "min_intra_species_ani": "99.73", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003788635.1", "gtdb_species": "s__Salinisphaera orenii", "ani": 76.0785, "matched_fragments": 116, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 96.8739, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016653315.1", "gtdb_species": "s__Halochromatium roseum", "ani": 76.0447, "matched_fragments": 52, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Halochromatium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000711955.1", "gtdb_species": "s__Nevskia soli", "ani": 76.0223, "matched_fragments": 134, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Nevskia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903822975.1", "gtdb_species": "s__Nevskia sp903822975", "ani": 75.991, "matched_fragments": 78, "total_fragments": 1110, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__XN24;f__XN24;g__XN24", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003634965.1", "gtdb_species": "s__Azonexus fungiphilus", "ani": 75.8433, "matched_fragments": 62, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.36", "min_intra_species_ani": "98.36", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016583905.1", "gtdb_species": "s__Halochromatium modestohalophilus", "ani": 75.8153, "matched_fragments": 50, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Halochromatium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016584105.1", "gtdb_species": "s__Ectothiorhodospira shaposhnikovii", "ani": 75.5848, "matched_fragments": 54, "total_fragments": 1110, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }