{ "tc_result": [ { "organism_name": "Salinisphaera shabanensis", "strain": "strain=E1L3A", "accession": "GCA_000215955.3", "taxid": 180542, "species_taxid": 180542, "relation_to_type": "type", "validated": true, "ani": 84.0005, "matched_fragments": 807, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera orenii", "strain": "strain=MK-B5", "accession": "GCA_003788635.1", "taxid": 856731, "species_taxid": 856731, "relation_to_type": "type", "validated": true, "ani": 79.9725, "matched_fragments": 587, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera halophila", "strain": "strain=YIM 95161", "accession": "GCA_003732545.1", "taxid": 1304158, "species_taxid": 1304158, "relation_to_type": "type", "validated": true, "ani": 79.9656, "matched_fragments": 573, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinisphaera japonica", "strain": "strain=YTM-1", "accession": "GCA_003788585.1", "taxid": 1304270, "species_taxid": 1304270, "relation_to_type": "type", "validated": true, "ani": 78.0572, "matched_fragments": 352, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=LMG867", "accession": "GCA_020011255.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 76.0414, "matched_fragments": 78, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=CFBP7112", "accession": "GCA_002218265.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 75.9091, "matched_fragments": 82, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=LMG872", "accession": "GCA_020011215.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 75.8569, "matched_fragments": 75, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurivermis fontis", "strain": "strain=JG42", "accession": "GCA_004001245.1", "taxid": 1972068, "species_taxid": 1972068, "relation_to_type": "type", "validated": true, "ani": 75.7784, "matched_fragments": 76, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas hydrangeae", "strain": "strain=LMG 31884", "accession": "GCA_905142475.1", "taxid": 2775159, "species_taxid": 2775159, "relation_to_type": "type", "validated": true, "ani": 75.7527, "matched_fragments": 83, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas citri", "strain": "strain=WHRI 5232", "accession": "GCA_003064125.1", "taxid": 346, "species_taxid": 346, "relation_to_type": "pathovar", "validated": true, "ani": 75.7355, "matched_fragments": 82, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas urethralis", "strain": "strain=BML-PP042", "accession": "GCA_021602465.1", "taxid": 2740517, "species_taxid": 2740517, "relation_to_type": "suspected-type", "validated": true, "ani": 75.6292, "matched_fragments": 67, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium gelatinicum", "strain": "strain=R-5-52-3", "accession": "GCA_008033445.1", "taxid": 2598725, "species_taxid": 2598725, "relation_to_type": "type", "validated": true, "ani": 75.6137, "matched_fragments": 86, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas urethralis", "strain": "strain=BML-PP042", "accession": "GCA_013373915.1", "taxid": 2740517, "species_taxid": 2740517, "relation_to_type": "suspected-type", "validated": true, "ani": 75.5966, "matched_fragments": 69, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas marina", "strain": "strain=C16B3", "accession": "GCA_012241385.1", "taxid": 2714601, "species_taxid": 2714601, "relation_to_type": "type", "validated": true, "ani": 75.5919, "matched_fragments": 104, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter silvisoli", "strain": "strain=zong2l5", "accession": "GCA_003382365.1", "taxid": 2293254, "species_taxid": 2293254, "relation_to_type": "type", "validated": true, "ani": 75.5776, "matched_fragments": 117, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB-1", "accession": "GCA_900108255.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 75.569, "matched_fragments": 79, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas lumbrici", "strain": "strain=1.1416", "accession": "GCA_006476065.1", "taxid": 2559601, "species_taxid": 2559601, "relation_to_type": "type", "validated": true, "ani": 75.5651, "matched_fragments": 86, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Natronocella acetinitrilica", "strain": "strain=ANL 6-2", "accession": "GCA_024170285.1", "taxid": 414046, "species_taxid": 414046, "relation_to_type": "type", "validated": true, "ani": 75.5456, "matched_fragments": 57, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas marina", "strain": "strain=FR1330", "accession": "GCA_007859325.1", "taxid": 488485, "species_taxid": 488485, "relation_to_type": "type", "validated": true, "ani": 75.469, "matched_fragments": 110, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aromatica", "strain": "strain=K172", "accession": "GCA_003030465.1", "taxid": 59405, "species_taxid": 59405, "relation_to_type": "type", "validated": true, "ani": 75.4386, "matched_fragments": 87, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter chroococcum subsp. isscasi", "strain": "strain=P205", "accession": "GCA_004327895.1", "taxid": 2528971, "species_taxid": 353, "relation_to_type": "type", "validated": true, "ani": 75.3907, "matched_fragments": 107, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plasticicumulans acidivorans", "strain": "strain=DSM 23606", "accession": "GCA_003182095.1", "taxid": 886464, "species_taxid": 886464, "relation_to_type": "type", "validated": true, "ani": 75.2915, "matched_fragments": 92, "total_fragments": 1095, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002433465.1", "gtdb_species": "s__Salinisphaera sp002433465", "ani": 99.5878, "matched_fragments": 859, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_002729955.1", "gtdb_species": "s__Salinisphaera sp002729955", "ani": 89.1478, "matched_fragments": 944, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000215955.2", "gtdb_species": "s__Salinisphaera shabanensis", "ani": 84.0009, "matched_fragments": 807, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017744135.1", "gtdb_species": "s__Salinisphaera sp017744135", "ani": 81.7997, "matched_fragments": 688, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003732545.1", "gtdb_species": "s__Salinisphaera halophila", "ani": 79.9936, "matched_fragments": 570, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 96.8739, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003788635.1", "gtdb_species": "s__Salinisphaera orenii", "ani": 79.9875, "matched_fragments": 585, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 96.8739, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000732535.1", "gtdb_species": "s__Salinisphaera hydrothermalis", "ani": 78.6588, "matched_fragments": 351, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003177035.1", "gtdb_species": "s__Salinisphaera sp003177035", "ani": 78.4708, "matched_fragments": 357, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003602005.1", "gtdb_species": "s__Salinisphaera sp003602005", "ani": 77.9571, "matched_fragments": 325, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013620825.1", "gtdb_species": "s__Rhodanobacter sp001899565", "ani": 75.5796, "matched_fragments": 98, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.48", "min_intra_species_ani": "98.45", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003382365.1", "gtdb_species": "s__Lysobacter silvisoli", "ani": 75.5672, "matched_fragments": 118, "total_fragments": 1095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }