{ "tc_result": [ { "organism_name": "Methylophaga aminisulfidivorans", "strain": "strain=MP", "accession": "GCA_000214595.2", "taxid": 230105, "species_taxid": 230105, "relation_to_type": "type", "validated": true, "ani": 76.8363, "matched_fragments": 53, "total_fragments": 489, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylophaga sulfidovorans", "strain": "strain=DSM 11578", "accession": "GCA_900114205.1", "taxid": 45496, "species_taxid": 45496, "relation_to_type": "type", "validated": true, "ani": 76.357, "matched_fragments": 61, "total_fragments": 489, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 2.78, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_018646825.1", "gtdb_species": "s__GCA-002733105 sp018646825", "ani": 99.6696, "matched_fragments": 419, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_905479985.1", "gtdb_species": "s__GCA-002733105 sp905479985", "ani": 82.1115, "matched_fragments": 377, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905479075.1", "gtdb_species": "s__GCA-002733105 sp905479075", "ani": 78.1527, "matched_fragments": 125, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905181885.1", "gtdb_species": "s__GCA-002733105 sp905181885", "ani": 77.9042, "matched_fragments": 112, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013215775.1", "gtdb_species": "s__GCA-002733105 sp013215775", "ani": 77.5991, "matched_fragments": 79, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002733335.1", "gtdb_species": "s__GCA-002733105 sp002733335", "ani": 77.3878, "matched_fragments": 57, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013215825.1", "gtdb_species": "s__GCA-002733105 sp013215825", "ani": 76.9484, "matched_fragments": 92, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000214595.1", "gtdb_species": "s__Methylophaga aminisulfidivorans", "ani": 76.8336, "matched_fragments": 54, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__Methylophaga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.12", "min_intra_species_ani": "97.07", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_002733715.2", "gtdb_species": "s__GCA-002733105 sp002733715", "ani": 76.6426, "matched_fragments": 84, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002163115.1", "gtdb_species": "s__41-12-T18 sp002163115", "ani": 76.5503, "matched_fragments": 88, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__41-12-T18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002733505.1", "gtdb_species": "s__GCA-002733105 sp002733505", "ani": 76.4724, "matched_fragments": 77, "total_fragments": 489, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__GCA-002733105", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }