{ "tc_result": [ { "organism_name": "Parahaliea mediterranea", "strain": "strain=DSM 21924", "accession": "GCA_003402235.1", "taxid": 651086, "species_taxid": 651086, "relation_to_type": "type", "validated": true, "ani": 77.6942, "matched_fragments": 243, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parahaliea maris", "strain": "strain=HSLHS9", "accession": "GCA_008064665.1", "taxid": 2716870, "species_taxid": 2716870, "relation_to_type": "type", "validated": true, "ani": 77.4691, "matched_fragments": 186, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Congregibacter litoralis", "strain": "strain=KT71", "accession": "GCA_000153125.2", "taxid": 393662, "species_taxid": 393662, "relation_to_type": "type", "validated": true, "ani": 77.1483, "matched_fragments": 242, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Seongchinamella sediminis", "strain": "strain=U0301", "accession": "GCA_003457605.1", "taxid": 2283635, "species_taxid": 2283635, "relation_to_type": "type", "validated": true, "ani": 77.0629, "matched_fragments": 194, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parahaliea aestuarii", "strain": "strain=S2-26", "accession": "GCA_008064635.1", "taxid": 1852021, "species_taxid": 1852021, "relation_to_type": "type", "validated": true, "ani": 76.9708, "matched_fragments": 220, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudohaliea rubra", "strain": "strain=DSM 19751", "accession": "GCA_000764025.1", "taxid": 475795, "species_taxid": 475795, "relation_to_type": "type", "validated": true, "ani": 76.9498, "matched_fragments": 191, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromatocurvus halotolerans", "strain": "strain=DSM 23344", "accession": "GCA_003428685.1", "taxid": 1132028, "species_taxid": 1132028, "relation_to_type": "type", "validated": true, "ani": 76.8572, "matched_fragments": 162, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromatocurvus halotolerans", "strain": "strain=DSM 23344", "accession": "GCA_004340525.1", "taxid": 1132028, "species_taxid": 1132028, "relation_to_type": "type", "validated": true, "ani": 76.8388, "matched_fragments": 156, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=NBRC 107739", "accession": "GCA_001983995.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.6938, "matched_fragments": 129, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Seongchinamella unica", "strain": "strain=GH4-78", "accession": "GCA_004354085.1", "taxid": 2547392, "species_taxid": 2547392, "relation_to_type": "type", "validated": true, "ani": 76.6897, "matched_fragments": 152, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=S1-36", "accession": "GCA_002869505.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.6782, "matched_fragments": 127, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=KCTC 23429", "accession": "GCA_014652255.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.6482, "matched_fragments": 128, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 76.4656, "matched_fragments": 95, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_002890935.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 76.3528, "matched_fragments": 73, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=FDAARGOS_877", "accession": "GCA_016028515.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 76.3372, "matched_fragments": 75, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 76.1997, "matched_fragments": 74, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas chlororaphis subsp. chlororaphis", "strain": "strain=DSM 50083", "accession": "GCA_007858335.1", "taxid": 333, "species_taxid": 587753, "relation_to_type": "type", "validated": true, "ani": 76.1254, "matched_fragments": 69, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas chlororaphis subsp. chlororaphis", "strain": "strain=LMG 5004", "accession": "GCA_001269625.1", "taxid": 333, "species_taxid": 587753, "relation_to_type": "type", "validated": true, "ani": 76.1254, "matched_fragments": 69, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas denitrificans", "strain": "strain=DSM 18045", "accession": "GCA_003056305.1", "taxid": 370769, "species_taxid": 370769, "relation_to_type": "type", "validated": true, "ani": 75.954, "matched_fragments": 88, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aestuarii", "strain": "strain=Hb3", "accession": "GCA_001886615.1", "taxid": 1897729, "species_taxid": 1897729, "relation_to_type": "type", "validated": true, "ani": 75.8348, "matched_fragments": 77, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacterium aestuarii", "strain": "strain=ST58-10", "accession": "GCA_001651805.1", "taxid": 1821621, "species_taxid": 1821621, "relation_to_type": "type", "validated": true, "ani": 75.7794, "matched_fragments": 63, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas poae", "strain": "strain=LMG 21465", "accession": "GCA_001730605.1", "taxid": 200451, "species_taxid": 200451, "relation_to_type": "type", "validated": true, "ani": 75.7369, "matched_fragments": 57, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas aestusnigri", "strain": "strain=CECT 8317", "accession": "GCA_900108005.1", "taxid": 857252, "species_taxid": 857252, "relation_to_type": "type", "validated": true, "ani": 75.7134, "matched_fragments": 64, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas aestusnigri", "strain": "strain=VGXO14", "accession": "GCA_002197985.1", "taxid": 857252, "species_taxid": 857252, "relation_to_type": "type", "validated": true, "ani": 75.7109, "matched_fragments": 64, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalobacter thiocyanaticus", "strain": "strain=Hrh1", "accession": "GCA_003932505.1", "taxid": 585455, "species_taxid": 585455, "relation_to_type": "type", "validated": true, "ani": 75.7018, "matched_fragments": 52, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas urmiana", "strain": "strain=TBZ3", "accession": "GCA_005780185.1", "taxid": 490901, "species_taxid": 490901, "relation_to_type": "type", "validated": true, "ani": 75.6971, "matched_fragments": 75, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas poae", "strain": "strain=DSM 14936", "accession": "GCA_001439785.1", "taxid": 200451, "species_taxid": 200451, "relation_to_type": "type", "validated": true, "ani": 75.6965, "matched_fragments": 59, "total_fragments": 1141, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002699145.1", "gtdb_species": "s__Halioglobus sp002699145", "ani": 77.9466, "matched_fragments": 199, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008064665.1", "gtdb_species": "s__Parahaliea maris", "ani": 77.4691, "matched_fragments": 186, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017255185.1", "gtdb_species": "s__Parahaliea mediterranea_A", "ani": 77.3526, "matched_fragments": 220, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002428935.1", "gtdb_species": "s__Congregibacter sp002428935", "ani": 77.3428, "matched_fragments": 205, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Congregibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004745945.1", "gtdb_species": "s__Halioglobus sp004745945", "ani": 77.3084, "matched_fragments": 190, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002692965.1", "gtdb_species": "s__NZNC01 sp002692965", "ani": 77.2266, "matched_fragments": 190, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__NZNC01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "97.22", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.84", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000153125.2", "gtdb_species": "s__Congregibacter litoralis", "ani": 77.1483, "matched_fragments": 242, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Congregibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009937575.1", "gtdb_species": "s__Halioglobus sp009937575", "ani": 77.1447, "matched_fragments": 132, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003457605.1", "gtdb_species": "s__Halioglobus sediminis", "ani": 77.0501, "matched_fragments": 195, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008064635.1", "gtdb_species": "s__Parahaliea aestuarii", "ani": 76.9708, "matched_fragments": 220, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000764025.1", "gtdb_species": "s__Pseudohaliea rubra", "ani": 76.9496, "matched_fragments": 191, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Pseudohaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004340525.1", "gtdb_species": "s__Chromatocurvus halotolerans", "ani": 76.8233, "matched_fragments": 157, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Chromatocurvus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_004354085.1", "gtdb_species": "s__Halioglobus sp004354085", "ani": 76.6897, "matched_fragments": 152, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000158155.1", "gtdb_species": "s__Congregibacter sp000158155", "ani": 76.6525, "matched_fragments": 180, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Congregibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016704305.1", "gtdb_species": "s__Halioglobus sp016704305", "ani": 76.2321, "matched_fragments": 94, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "98.09", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013523165.1", "gtdb_species": "s__Pseudomonas_E entomophila_A", "ani": 76.1341, "matched_fragments": 69, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003056305.1", "gtdb_species": "s__Halomonas denitrificans", "ani": 75.9367, "matched_fragments": 89, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001651805.1", "gtdb_species": "s__Marinobacterium_A aestuarii", "ani": 75.7789, "matched_fragments": 63, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001439785.1", "gtdb_species": "s__Pseudomonas_E poae", "ani": 75.6965, "matched_fragments": 59, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.09", "min_intra_species_ani": "98.80", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.92", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_002197985.1", "gtdb_species": "s__Pseudomonas_D aestusnigri", "ani": 75.6942, "matched_fragments": 65, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.11", "min_intra_species_ani": "96.74", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.81", "num_clustered_genomes": 25, "status": "-" }, { "accession": "GCF_005780185.1", "gtdb_species": "s__Halomonas urmiana", "ani": 75.6802, "matched_fragments": 76, "total_fragments": 1141, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }