{ "tc_result": [ { "organism_name": "Parahaliea aestuarii", "strain": "strain=S2-26", "accession": "GCA_008064635.1", "taxid": 1852021, "species_taxid": 1852021, "relation_to_type": "type", "validated": true, "ani": 78.1651, "matched_fragments": 226, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parahaliea mediterranea", "strain": "strain=DSM 21924", "accession": "GCA_003402235.1", "taxid": 651086, "species_taxid": 651086, "relation_to_type": "type", "validated": true, "ani": 77.9726, "matched_fragments": 250, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Seongchinamella sediminis", "strain": "strain=U0301", "accession": "GCA_003457605.1", "taxid": 2283635, "species_taxid": 2283635, "relation_to_type": "type", "validated": true, "ani": 77.9335, "matched_fragments": 246, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parahaliea maris", "strain": "strain=HSLHS9", "accession": "GCA_008064665.1", "taxid": 2716870, "species_taxid": 2716870, "relation_to_type": "type", "validated": true, "ani": 77.6476, "matched_fragments": 228, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Seongchinamella unica", "strain": "strain=GH4-78", "accession": "GCA_004354085.1", "taxid": 2547392, "species_taxid": 2547392, "relation_to_type": "type", "validated": true, "ani": 77.3578, "matched_fragments": 214, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=NBRC 107739", "accession": "GCA_001983995.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.9033, "matched_fragments": 170, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=KCTC 23429", "accession": "GCA_014652255.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.8896, "matched_fragments": 171, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halioglobus japonicus", "strain": "strain=S1-36", "accession": "GCA_002869505.1", "taxid": 930805, "species_taxid": 930805, "relation_to_type": "type", "validated": true, "ani": 76.85, "matched_fragments": 172, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas thermotolerans", "strain": "strain=DSM 14292", "accession": "GCA_000364625.1", "taxid": 157784, "species_taxid": 157784, "relation_to_type": "type", "validated": true, "ani": 76.3631, "matched_fragments": 85, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromatocurvus halotolerans", "strain": "strain=DSM 23344", "accession": "GCA_004340525.1", "taxid": 1132028, "species_taxid": 1132028, "relation_to_type": "type", "validated": true, "ani": 76.1395, "matched_fragments": 97, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax marinus", "strain": "strain=R8-12", "accession": "GCA_025532125.1", "taxid": 1177169, "species_taxid": 1177169, "relation_to_type": "type", "validated": true, "ani": 76.1344, "matched_fragments": 86, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas citronellolis", "strain": "strain=LMG 18378", "accession": "GCA_900112375.1", "taxid": 53408, "species_taxid": 53408, "relation_to_type": "type", "validated": true, "ani": 76.0404, "matched_fragments": 125, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kineobactrum sediminis", "strain": "strain=F02", "accession": "GCA_002868715.1", "taxid": 1905677, "species_taxid": 1905677, "relation_to_type": "type", "validated": true, "ani": 76.0317, "matched_fragments": 107, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas citronellolis", "strain": "strain=NBRC 103043", "accession": "GCA_002091555.1", "taxid": 53408, "species_taxid": 53408, "relation_to_type": "type", "validated": true, "ani": 76.0298, "matched_fragments": 126, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas delhiensis", "strain": "strain=RLD-1", "accession": "GCA_900187975.1", "taxid": 366289, "species_taxid": 366289, "relation_to_type": "type", "validated": true, "ani": 75.9702, "matched_fragments": 130, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas delhiensis", "strain": "strain=CCM 7361", "accession": "GCA_900099945.1", "taxid": 366289, "species_taxid": 366289, "relation_to_type": "type", "validated": true, "ani": 75.9694, "matched_fragments": 130, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas songnenensis", "strain": "strain=NEAU-ST5-5", "accession": "GCA_003696315.1", "taxid": 1176259, "species_taxid": 1176259, "relation_to_type": "type", "validated": true, "ani": 75.7679, "matched_fragments": 62, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guguanensis", "strain": "strain=JCM 18416", "accession": "GCA_900104265.1", "taxid": 1198456, "species_taxid": 1198456, "relation_to_type": "type", "validated": true, "ani": 75.754, "matched_fragments": 77, "total_fragments": 951, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 77.13, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002699145.1", "gtdb_species": "s__Halioglobus sp002699145", "ani": 78.4513, "matched_fragments": 385, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004745945.1", "gtdb_species": "s__Halioglobus sp004745945", "ani": 78.2464, "matched_fragments": 254, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008064635.1", "gtdb_species": "s__Parahaliea aestuarii", "ani": 78.1814, "matched_fragments": 225, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017255185.1", "gtdb_species": "s__Parahaliea mediterranea_A", "ani": 78.1392, "matched_fragments": 264, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003402235.1", "gtdb_species": "s__Parahaliea mediterranea", "ani": 77.9726, "matched_fragments": 250, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003457605.1", "gtdb_species": "s__Halioglobus sediminis", "ani": 77.9468, "matched_fragments": 245, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008064665.1", "gtdb_species": "s__Parahaliea maris", "ani": 77.6476, "matched_fragments": 228, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Parahaliea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009937575.1", "gtdb_species": "s__Halioglobus sp009937575", "ani": 77.5811, "matched_fragments": 236, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004354085.1", "gtdb_species": "s__Halioglobus sp004354085", "ani": 77.3607, "matched_fragments": 213, "total_fragments": 951, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000364625.1", "gtdb_species": "s__Pseudomonas_E thermotolerans", "ani": 76.3631, "matched_fragments": 85, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.25", "min_intra_species_ani": "99.24", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_902705825.1", "gtdb_species": "s__Halioglobus japonicus_A", "ani": 76.2413, "matched_fragments": 107, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Halioglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009763245.1", "gtdb_species": "s__Pseudomonas_E sp009763245", "ani": 76.1985, "matched_fragments": 81, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900112375.1", "gtdb_species": "s__Pseudomonas citronellolis", "ani": 76.0404, "matched_fragments": 125, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas", "ani_circumscription_radius": 95.078, "mean_intra_species_ani": "97.44", "min_intra_species_ani": "97.08", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.82", "num_clustered_genomes": 26, "status": "-" }, { "accession": "GCF_900187975.1", "gtdb_species": "s__Pseudomonas delhiensis", "ani": 75.9702, "matched_fragments": 130, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas", "ani_circumscription_radius": 95.078, "mean_intra_species_ani": "98.79", "min_intra_species_ani": "97.59", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900112645.1", "gtdb_species": "s__Pseudomonas_E straminea", "ani": 75.9625, "matched_fragments": 61, "total_fragments": 951, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.06", "min_intra_species_ani": "98.06", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" } ] }