{ "tc_result": [ { "organism_name": "Cobetia marina", "strain": "strain=JCM 21022", "accession": "GCA_001720485.1", "taxid": 28258, "species_taxid": 28258, "relation_to_type": "type", "validated": true, "ani": 88.7267, "matched_fragments": 1138, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cobetia crustatorum", "strain": "strain=JO1", "accession": "GCA_000591415.1", "taxid": 553385, "species_taxid": 553385, "relation_to_type": "type", "validated": true, "ani": 84.3126, "matched_fragments": 925, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas halophila", "strain": "strain=NBRC 102604", "accession": "GCA_007989465.1", "taxid": 29573, "species_taxid": 29573, "relation_to_type": "type", "validated": true, "ani": 79.7782, "matched_fragments": 476, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas smyrnensis", "strain": "strain=AAD6", "accession": "GCA_000265245.2", "taxid": 720605, "species_taxid": 720605, "relation_to_type": "type", "validated": true, "ani": 79.7362, "matched_fragments": 498, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas denitrificans", "strain": "strain=DSM 18045", "accession": "GCA_003056305.1", "taxid": 370769, "species_taxid": 370769, "relation_to_type": "type", "validated": true, "ani": 79.4979, "matched_fragments": 482, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aestuarii", "strain": "strain=Hb3", "accession": "GCA_001886615.1", "taxid": 1897729, "species_taxid": 1897729, "relation_to_type": "type", "validated": true, "ani": 79.2856, "matched_fragments": 422, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas shengliensis", "strain": "strain=CGMCC 1.6444", "accession": "GCA_900104135.1", "taxid": 419597, "species_taxid": 419597, "relation_to_type": "type", "validated": true, "ani": 79.1295, "matched_fragments": 436, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas salipaludis", "strain": "strain=WRN001", "accession": "GCA_002286975.1", "taxid": 2032625, "species_taxid": 2032625, "relation_to_type": "type", "validated": true, "ani": 79.0529, "matched_fragments": 447, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas litopenaei", "strain": "strain=SYSU ZJ2214", "accession": "GCA_003045775.1", "taxid": 2109328, "species_taxid": 2109328, "relation_to_type": "type", "validated": true, "ani": 79.0407, "matched_fragments": 459, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas pacifica", "strain": "strain=NBRC 102220", "accession": "GCA_007989625.1", "taxid": 77098, "species_taxid": 77098, "relation_to_type": "type", "validated": true, "ani": 79.0283, "matched_fragments": 405, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidoxydans", "strain": "strain=MCCC 1A11059", "accession": "GCA_017868775.1", "taxid": 2733484, "species_taxid": 2733484, "relation_to_type": "type", "validated": true, "ani": 79.0279, "matched_fragments": 430, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aerodenitrificans", "strain": "strain=MCCC 1A11058", "accession": "GCA_021404405.1", "taxid": 2733483, "species_taxid": 2733483, "relation_to_type": "type", "validated": true, "ani": 79.0264, "matched_fragments": 396, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas ethanolica", "strain": "strain=MCCC 1A11081", "accession": "GCA_021404305.1", "taxid": 2733486, "species_taxid": 2733486, "relation_to_type": "type", "validated": true, "ani": 79.0182, "matched_fragments": 403, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas pantelleriensis", "strain": "strain=AAP", "accession": "GCA_900102875.1", "taxid": 48727, "species_taxid": 48727, "relation_to_type": "type", "validated": true, "ani": 79.0015, "matched_fragments": 406, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas campaniensis", "strain": "strain=5AG", "accession": "GCA_014193375.1", "taxid": 213554, "species_taxid": 213554, "relation_to_type": "type", "validated": true, "ani": 78.9942, "matched_fragments": 445, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola endophyticus", "strain": "strain=CPA92", "accession": "GCA_003206575.1", "taxid": 1949083, "species_taxid": 1949083, "relation_to_type": "type", "validated": true, "ani": 78.9025, "matched_fragments": 432, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas campisalis", "strain": "strain=A4", "accession": "GCA_022341425.1", "taxid": 74661, "species_taxid": 74661, "relation_to_type": "type", "validated": true, "ani": 78.892, "matched_fragments": 397, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas heilongjiangensis", "strain": "strain=9-2", "accession": "GCA_003202165.1", "taxid": 1387883, "species_taxid": 1387883, "relation_to_type": "type", "validated": true, "ani": 78.8833, "matched_fragments": 453, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas tianxiuensis", "strain": "strain=BC-M4-5", "accession": "GCA_009834345.1", "taxid": 2497861, "species_taxid": 2497861, "relation_to_type": "type", "validated": true, "ani": 78.7537, "matched_fragments": 387, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas kenyensis", "strain": "strain=DSM 17331", "accession": "GCA_022341445.1", "taxid": 321266, "species_taxid": 321266, "relation_to_type": "type", "validated": true, "ani": 78.662, "matched_fragments": 380, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola halophyticus", "strain": "strain=CR45", "accession": "GCA_003206695.1", "taxid": 1808881, "species_taxid": 1808881, "relation_to_type": "type", "validated": true, "ani": 78.4009, "matched_fragments": 333, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola lusitanus", "strain": "strain=CR50", "accession": "GCA_003206045.1", "taxid": 1949085, "species_taxid": 1949085, "relation_to_type": "type", "validated": true, "ani": 78.3433, "matched_fragments": 384, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas huangheensis", "strain": "strain=BJGMM-B45", "accession": "GCA_001431725.1", "taxid": 1178482, "species_taxid": 1178482, "relation_to_type": "type", "validated": true, "ani": 78.1321, "matched_fragments": 286, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas huangheensis", "strain": "strain=BJGMM-B45", "accession": "GCA_000470745.1", "taxid": 1178482, "species_taxid": 1178482, "relation_to_type": "type", "validated": true, "ani": 78.1273, "matched_fragments": 287, "total_fragments": 1307, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_000754225.1", "gtdb_species": "s__Cobetia amphilecti", "ani": 97.0649, "matched_fragments": 1150, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Cobetia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.77", "min_intra_species_ani": "95.09", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 19, "status": "conclusive" }, { "accession": "GCF_001720485.1", "gtdb_species": "s__Cobetia marina", "ani": 88.7344, "matched_fragments": 1137, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Cobetia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.51", "min_intra_species_ani": "98.31", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.93", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_000591415.1", "gtdb_species": "s__Cobetia crustatorum", "ani": 84.2969, "matched_fragments": 926, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Cobetia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.71", "min_intra_species_ani": "98.71", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009796845.1", "gtdb_species": "s__Cobetia sp009796845", "ani": 83.1392, "matched_fragments": 979, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Cobetia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000265245.1", "gtdb_species": "s__Halomonas smyrnensis", "ani": 79.7253, "matched_fragments": 499, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.45", "min_intra_species_ani": "98.45", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001577635.1", "gtdb_species": "s__Halomonas_C sp001577635", "ani": 79.5296, "matched_fragments": 455, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_010993675.1", "gtdb_species": "s__Halomonas_C sp010993675", "ani": 79.5248, "matched_fragments": 463, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003056305.1", "gtdb_species": "s__Halomonas denitrificans", "ani": 79.4922, "matched_fragments": 483, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001886615.1", "gtdb_species": "s__Halomonas aestuarii", "ani": 79.2844, "matched_fragments": 422, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004117855.1", "gtdb_species": "s__Halomonas_C coralii", "ani": 79.2834, "matched_fragments": 472, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001971685.1", "gtdb_species": "s__Halomonas_B sp001971685", "ani": 79.1109, "matched_fragments": 467, "total_fragments": 1307, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }